RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ATP6V1AP38606 617 aa20.82■□□□□ 0.92
SNX27-202ENST00000368841 STAT6P42226 847 aa20.82■□□□□ 0.92
SNX27-202ENST00000368841 AMPD3Q01432 767 aa20.82■□□□□ 0.92
SNX27-202ENST00000368841 KIF5BP33176 963 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 CETN1Q12798 172 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 CCDC174Q6PII3 467 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 NCOA7Q8NI08 942 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 CCDC175P0C221 793 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 CDC5LQ99459 802 aaKnown RBP20.81■□□□□ 0.92
SNX27-202ENST00000368841 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
SNX27-202ENST00000368841 FAM135AQ9P2D6 1515 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 BAG3O95817 575 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 IGHDP01880 384 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 PKD2L1Q9P0L9 805 aa20.81■□□□□ 0.92
SNX27-202ENST00000368841 CEP135Q66GS9 1140 aa20.8■□□□□ 0.92
SNX27-202ENST00000368841 POGZQ7Z3K3 1410 aa20.8■□□□□ 0.92
SNX27-202ENST00000368841 RXRAP19793 462 aa20.8■□□□□ 0.92
SNX27-202ENST00000368841 ZHX1Q9UKY1 873 aaPredicted RBP20.8■□□□□ 0.92
SNX27-202ENST00000368841 FSD2A1L4K1 749 aa20.8■□□□□ 0.92
SNX27-202ENST00000368841 SMARCC1Q92922 1105 aaPredicted RBP20.8■□□□□ 0.92
SNX27-202ENST00000368841 MAP3K9P80192 1104 aa20.8■□□□□ 0.92
SNX27-202ENST00000368841 WTAPQ15007 396 aa20.8■□□□□ 0.92
SNX27-202ENST00000368841 CGNQ9P2M7 1197 aaKnown RBP20.8■□□□□ 0.92
SNX27-202ENST00000368841 TSNARE1Q96NA8 513 aa20.79■□□□□ 0.92
SNX27-202ENST00000368841 KRT13P13646 458 aa20.79■□□□□ 0.92
SNX27-202ENST00000368841 TTF1Q15361 905 aaPredicted RBP20.79■□□□□ 0.92
SNX27-202ENST00000368841 ADGRF5Q8IZF2 1346 aa20.79■□□□□ 0.92
SNX27-202ENST00000368841 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
SNX27-202ENST00000368841 GNG11P61952 73 aa20.79■□□□□ 0.92
SNX27-202ENST00000368841 ALDH1L2Q3SY69 923 aa20.79■□□□□ 0.92
SNX27-202ENST00000368841 CAPZA3Q96KX2 299 aa20.79■□□□□ 0.92
SNX27-202ENST00000368841 CRNKL1Q9BZJ0 848 aaKnown RBP20.79■□□□□ 0.92
SNX27-202ENST00000368841 N4BP3O15049 544 aa20.78■□□□□ 0.92
SNX27-202ENST00000368841 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
SNX27-202ENST00000368841 MIGA1Q8NAN2 632 aa20.78■□□□□ 0.92
SNX27-202ENST00000368841 PROCA1Q8NCQ7 364 aaPredicted RBP20.78■□□□□ 0.92
SNX27-202ENST00000368841 ECHDC1Q9NTX5 307 aa20.78■□□□□ 0.92
SNX27-202ENST00000368841 FERP16591 822 aa20.78■□□□□ 0.92
SNX27-202ENST00000368841 ANO6Q4KMQ2 910 aa20.78■□□□□ 0.92
SNX27-202ENST00000368841 BRF1Q92994 677 aa20.78■□□□□ 0.92
SNX27-202ENST00000368841 MXRA7P84157 204 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 EEF2P13639 858 aaKnown RBP20.77■□□□□ 0.92
SNX27-202ENST00000368841 PPARDQ03181 441 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 IKBKGQ9Y6K9 419 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 ALG1Q9BT22 464 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 RPGRIP1LQ68CZ1 1315 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 ZSCAN23Q3MJ62 389 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 GSTA5Q7RTV2 222 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 CCDC63Q8NA47 563 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 TBC1D5Q92609 795 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 Q6ZUG5 572 aa20.77■□□□□ 0.92
SNX27-202ENST00000368841 HCLS1P14317 486 aaPredicted RBP20.77■□□□□ 0.91
SNX27-202ENST00000368841 CCDC50Q8IVM0 306 aa20.77■□□□□ 0.91
SNX27-202ENST00000368841 C16orf71Q8IYS4 520 aaPredicted RBP20.77■□□□□ 0.91
SNX27-202ENST00000368841 C8orf37Q96NL8 207 aa20.77■□□□□ 0.91
SNX27-202ENST00000368841 PA2G4Q9UQ80 394 aaKnown RBP20.77■□□□□ 0.91
SNX27-202ENST00000368841 ATP2B3Q16720 1220 aa20.76■□□□□ 0.91
SNX27-202ENST00000368841 UIMC1Q96RL1 719 aa20.76■□□□□ 0.91
SNX27-202ENST00000368841 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.76■□□□□ 0.91
SNX27-202ENST00000368841 V9GYY5 206 aaPredicted RBP20.76■□□□□ 0.91
SNX27-202ENST00000368841 CTAGE5O15320 804 aa20.76■□□□□ 0.91
SNX27-202ENST00000368841 SYKP43405 635 aa20.76■□□□□ 0.91
SNX27-202ENST00000368841 MCM3P25205 808 aa20.76■□□□□ 0.91
SNX27-202ENST00000368841 UBASH3AP57075 661 aa20.76■□□□□ 0.91
SNX27-202ENST00000368841 HELBQ8NG08 1087 aaPredicted RBP20.76■□□□□ 0.91
SNX27-202ENST00000368841 SSX2IPQ9Y2D8 614 aa20.76■□□□□ 0.91
SNX27-202ENST00000368841 WASLO00401 505 aaPredicted RBP20.76■□□□□ 0.91
SNX27-202ENST00000368841 DHX58Q96C10 678 aa20.76■□□□□ 0.91
SNX27-202ENST00000368841 HSF2BPO75031 334 aa20.75■□□□□ 0.91
SNX27-202ENST00000368841 FAM114A1Q8IWE2 563 aa20.75■□□□□ 0.91
SNX27-202ENST00000368841 NAA15Q9BXJ9 866 aaKnown RBP20.75■□□□□ 0.91
SNX27-202ENST00000368841 DDX23Q9BUQ8 820 aaKnown RBP20.75■□□□□ 0.91
SNX27-202ENST00000368841 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
SNX27-202ENST00000368841 NAPAP54920 295 aa20.75■□□□□ 0.91
SNX27-202ENST00000368841 CCDC152Q4G0S7 254 aa20.75■□□□□ 0.91
SNX27-202ENST00000368841 CABLES1Q8TDN4 633 aa20.74■□□□□ 0.91
SNX27-202ENST00000368841 ZNF165P49910 485 aa20.74■□□□□ 0.91
SNX27-202ENST00000368841 TTC22Q5TAA0 569 aa20.74■□□□□ 0.91
SNX27-202ENST00000368841 KIAA0753Q2KHM9 967 aa20.74■□□□□ 0.91
SNX27-202ENST00000368841 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
SNX27-202ENST00000368841 ZKSCAN3Q9BRR0 538 aa20.74■□□□□ 0.91
SNX27-202ENST00000368841 SAP30BPQ9UHR5 308 aaKnown RBP20.74■□□□□ 0.91
SNX27-202ENST00000368841 CCDC102BQ68D86 513 aa20.74■□□□□ 0.91
SNX27-202ENST00000368841 STXBP4Q6ZWJ1 553 aa20.73■□□□□ 0.91
SNX27-202ENST00000368841 DDX19AQ9NUU7 478 aaKnown RBP20.73■□□□□ 0.91
SNX27-202ENST00000368841 PLEKHH1Q9ULM0 1364 aa20.73■□□□□ 0.91
SNX27-202ENST00000368841 AOPEPQ8N6M6 819 aa20.73■□□□□ 0.91
SNX27-202ENST00000368841 XAGE3Q8WTP9 111 aa20.73■□□□□ 0.91
SNX27-202ENST00000368841 SETDB2Q96T68 719 aa20.73■□□□□ 0.91
SNX27-202ENST00000368841 MCM7P33993 719 aa20.73■□□□□ 0.91
SNX27-202ENST00000368841 STX17P56962 302 aa20.73■□□□□ 0.91
SNX27-202ENST00000368841 SELENOSQ9BQE4 189 aa20.73■□□□□ 0.91
SNX27-202ENST00000368841 MCM5P33992 734 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 RTN1Q16799 776 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 PTPRCP08575 1304 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 ACTN2P35609 894 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 GIGYF2Q6Y7W6 1299 aaKnown RBP20.72■□□□□ 0.91
SNX27-202ENST00000368841 SMARCC2Q8TAQ2 1214 aa20.72■□□□□ 0.91
SNX27-202ENST00000368841 UTP14AQ9BVJ6 771 aaKnown RBP20.72■□□□□ 0.91
SNX27-202ENST00000368841 ZBTB43O43298 467 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms