RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.87■■□□□ 1.41
CHTOP-204ENST00000368694 HCLS1P14317 486 aaPredicted RBP23.87■■□□□ 1.41
CHTOP-204ENST00000368694 ADRA2BP18089 450 aa23.87■■□□□ 1.41
CHTOP-204ENST00000368694 AACSQ86V21 672 aa23.87■■□□□ 1.41
CHTOP-204ENST00000368694 TTLL11Q8NHH1 800 aa23.87■■□□□ 1.41
CHTOP-204ENST00000368694 USP42Q9H9J4 1324 aaKnown RBP23.87■■□□□ 1.41
CHTOP-204ENST00000368694 STAP2Q9UGK3 403 aa23.87■■□□□ 1.41
CHTOP-204ENST00000368694 GREM2Q9H772 168 aa23.86■■□□□ 1.41
CHTOP-204ENST00000368694 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.86■■□□□ 1.41
CHTOP-204ENST00000368694 TUBGCP6Q96RT7 1819 aa23.86■■□□□ 1.41
CHTOP-204ENST00000368694 HSP90B1P14625 803 aaKnown RBP23.85■■□□□ 1.41
CHTOP-204ENST00000368694 SETDB2Q96T68 719 aa23.85■■□□□ 1.41
CHTOP-204ENST00000368694 COL24A1Q17RW2 1714 aa23.85■■□□□ 1.41
CHTOP-204ENST00000368694 ITGA6P23229 1130 aa23.85■■□□□ 1.41
CHTOP-204ENST00000368694 TFCP2Q12800 502 aa23.85■■□□□ 1.41
CHTOP-204ENST00000368694 AOX1Q06278 1338 aa23.85■■□□□ 1.41
CHTOP-204ENST00000368694 SEC24BO95487 1268 aa23.84■■□□□ 1.41
CHTOP-204ENST00000368694 SDSP20132 328 aa23.83■■□□□ 1.41
CHTOP-204ENST00000368694 SSFA2P28290 1259 aa23.83■■□□□ 1.41
CHTOP-204ENST00000368694 GPATCH3Q96I76 525 aa23.83■■□□□ 1.41
CHTOP-204ENST00000368694 ANKRD18BA2A2Z9 1011 aa23.83■■□□□ 1.41
CHTOP-204ENST00000368694 EYA2O00167 538 aa23.83■■□□□ 1.41
CHTOP-204ENST00000368694 GTF2E1P29083 439 aaPredicted RBP23.83■■□□□ 1.41
CHTOP-204ENST00000368694 IL15P40933 162 aaPredicted RBP23.83■■□□□ 1.41
CHTOP-204ENST00000368694 LRRC24Q50LG9 513 aa23.83■■□□□ 1.41
CHTOP-204ENST00000368694 EAF2Q96CJ1 260 aaPredicted RBP23.83■■□□□ 1.41
CHTOP-204ENST00000368694 RGPD3A6NKT7 1758 aaPredicted RBP23.83■■□□□ 1.4
CHTOP-204ENST00000368694 RGPD4Q7Z3J3 1758 aa23.83■■□□□ 1.4
CHTOP-204ENST00000368694 ATG9AQ7Z3C6 839 aa23.82■■□□□ 1.4
CHTOP-204ENST00000368694 CCDC8Q9H0W5 538 aaPredicted RBP23.82■■□□□ 1.4
CHTOP-204ENST00000368694 CDC45O75419 566 aa23.82■■□□□ 1.4
CHTOP-204ENST00000368694 CIAO1O76071 339 aa23.82■■□□□ 1.4
CHTOP-204ENST00000368694 CASZ1Q86V15 1759 aa23.82■■□□□ 1.4
CHTOP-204ENST00000368694 NYXQ9GZU5 481 aa23.82■■□□□ 1.4
CHTOP-204ENST00000368694 AK9Q5TCS8 1911 aa23.81■■□□□ 1.4
CHTOP-204ENST00000368694 TTC41PQ6P2S7 1318 aa23.81■■□□□ 1.4
CHTOP-204ENST00000368694 ERFEQ4G0M1 354 aa23.81■■□□□ 1.4
CHTOP-204ENST00000368694 PUS3Q9BZE2 481 aaKnown RBP23.81■■□□□ 1.4
CHTOP-204ENST00000368694 TRIM6-TRIM34B2RNG4 842 aa23.8■■□□□ 1.4
CHTOP-204ENST00000368694 TNNI3KQ59H18 835 aa23.8■■□□□ 1.4
CHTOP-204ENST00000368694 NBPF5PQ86XG9 351 aaPredicted RBP23.8■■□□□ 1.4
CHTOP-204ENST00000368694 UPF2Q9HAU5 1272 aaKnown RBP23.8■■□□□ 1.4
CHTOP-204ENST00000368694 FPGT-TNNI3KV9GXZ4 949 aa23.8■■□□□ 1.4
CHTOP-204ENST00000368694 TBC1D9Q6ZT07 1266 aa23.8■■□□□ 1.4
CHTOP-204ENST00000368694 PI4K2BQ8TCG2 481 aa23.8■■□□□ 1.4
CHTOP-204ENST00000368694 TFCP2L1Q9NZI6 479 aa23.8■■□□□ 1.4
CHTOP-204ENST00000368694 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
CHTOP-204ENST00000368694 ERC2O15083 957 aa23.79■■□□□ 1.4
CHTOP-204ENST00000368694 CCDC152Q4G0S7 254 aa23.79■■□□□ 1.4
CHTOP-204ENST00000368694 ECHDC1Q9NTX5 307 aa23.79■■□□□ 1.4
CHTOP-204ENST00000368694 TLR7Q9NYK1 1049 aaKnown RBP23.79■■□□□ 1.4
CHTOP-204ENST00000368694 NPHP1O15259 732 aa23.79■■□□□ 1.4
CHTOP-204ENST00000368694 RILPL2Q969X0 211 aa23.79■■□□□ 1.4
CHTOP-204ENST00000368694 MFAP1P55081 439 aaKnown RBP23.78■■□□□ 1.4
CHTOP-204ENST00000368694 LDHAL6AQ6ZMR3 332 aa23.78■■□□□ 1.4
CHTOP-204ENST00000368694 GLRX3O76003 335 aaKnown RBP23.77■■□□□ 1.4
CHTOP-204ENST00000368694 ANP32AP39687 249 aaKnown RBP23.77■■□□□ 1.4
CHTOP-204ENST00000368694 ZNF827Q17R98 1081 aa23.77■■□□□ 1.4
CHTOP-204ENST00000368694 CARMIL3Q8ND23 1372 aa23.77■■□□□ 1.4
CHTOP-204ENST00000368694 SPEF2Q9C093 1822 aa23.77■■□□□ 1.4
CHTOP-204ENST00000368694 CASC1Q6TDU7 716 aa23.77■■□□□ 1.4
CHTOP-204ENST00000368694 TPTE2Q6XPS3 522 aa23.77■■□□□ 1.4
CHTOP-204ENST00000368694 CNNM1Q9NRU3 951 aa23.77■■□□□ 1.4
CHTOP-204ENST00000368694 CEP126Q9P2H0 1117 aa23.77■■□□□ 1.4
CHTOP-204ENST00000368694 MAP4K4O95819 1239 aaPredicted RBP23.75■■□□□ 1.39
CHTOP-204ENST00000368694 GYS1P13807 737 aa23.75■■□□□ 1.39
CHTOP-204ENST00000368694 ABCC12Q96J65 1359 aa23.75■■□□□ 1.39
CHTOP-204ENST00000368694 NFIXQ14938 502 aa23.75■■□□□ 1.39
CHTOP-204ENST00000368694 DBNLQ9UJU6 430 aaKnown RBP23.75■■□□□ 1.39
CHTOP-204ENST00000368694 AKT1S1Q96B36 256 aa23.74■■□□□ 1.39
CHTOP-204ENST00000368694 NEUROD6Q96NK8 337 aa23.74■■□□□ 1.39
CHTOP-204ENST00000368694 ZNF609O15014 1411 aa23.74■■□□□ 1.39
CHTOP-204ENST00000368694 GPR108Q9NPR9 543 aa23.74■■□□□ 1.39
CHTOP-204ENST00000368694 SEC31BQ9NQW1 1179 aa23.74■■□□□ 1.39
CHTOP-204ENST00000368694 LRP5O75197 1615 aa23.73■■□□□ 1.39
CHTOP-204ENST00000368694 RTL9Q8NET4 1388 aa23.73■■□□□ 1.39
CHTOP-204ENST00000368694 METTL24Q5JXM2 366 aa23.73■■□□□ 1.39
CHTOP-204ENST00000368694 CNTROBQ8N137 903 aa23.72■■□□□ 1.39
CHTOP-204ENST00000368694 MPHOSPH8Q99549 860 aa23.72■■□□□ 1.39
CHTOP-204ENST00000368694 DBNDD2Q9BQY9 259 aa23.72■■□□□ 1.39
CHTOP-204ENST00000368694 RIPOR2Q9Y4F9 1068 aa23.72■■□□□ 1.39
CHTOP-204ENST00000368694 RIC1Q4ADV7 1423 aa23.72■■□□□ 1.39
CHTOP-204ENST00000368694 EN1Q05925 392 aaPredicted RBP23.72■■□□□ 1.39
CHTOP-204ENST00000368694 SLC10A5Q5PT55 438 aa23.72■■□□□ 1.39
CHTOP-204ENST00000368694 CCDC24Q8N4L8 307 aa23.72■■□□□ 1.39
CHTOP-204ENST00000368694 TIMM10P62072 90 aa23.71■■□□□ 1.39
CHTOP-204ENST00000368694 SF3B2Q13435 895 aaKnown RBP23.71■■□□□ 1.39
CHTOP-204ENST00000368694 C3orf67Q6ZVT6 689 aa23.71■■□□□ 1.39
CHTOP-204ENST00000368694 AKAP2Q9Y2D5 859 aa23.71■■□□□ 1.39
CHTOP-204ENST00000368694 A0A1B0GUL7 405 aa23.71■■□□□ 1.39
CHTOP-204ENST00000368694 EZH2Q15910 746 aaKnown RBP23.71■■□□□ 1.39
CHTOP-204ENST00000368694 CNBD1Q8NA66 436 aa23.71■■□□□ 1.39
CHTOP-204ENST00000368694 NLRP3Q96P20 1036 aa23.71■■□□□ 1.39
CHTOP-204ENST00000368694 IGHMBP2P38935 993 aaKnown RBP23.7■■□□□ 1.38
CHTOP-204ENST00000368694 SF3B3Q15393 1217 aaKnown RBP23.7■■□□□ 1.38
CHTOP-204ENST00000368694 TAF1P21675 1872 aa23.7■■□□□ 1.38
CHTOP-204ENST00000368694 CDC5LQ99459 802 aaKnown RBP23.69■■□□□ 1.38
CHTOP-204ENST00000368694 BOLA2Q9H3K6 86 aa23.69■■□□□ 1.38
CHTOP-204ENST00000368694 COL23A1Q86Y22 540 aaPredicted RBP23.68■■□□□ 1.38
CHTOP-204ENST00000368694 FLAD1Q8NFF5 587 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms