RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 ZCCHC17Q9NP64 241 aaKnown RBP20.95■□□□□ 0.94
CHTOP-201ENST00000368686 STAG3Q9UJ98 1225 aa20.95■□□□□ 0.94
CHTOP-201ENST00000368686 SOX12O15370 315 aa20.94■□□□□ 0.94
CHTOP-201ENST00000368686 LRRFIP1Q32MZ4 808 aaKnown RBP20.94■□□□□ 0.94
CHTOP-201ENST00000368686 GORABQ5T7V8 394 aa20.94■□□□□ 0.94
CHTOP-201ENST00000368686 NCAPGQ9BPX3 1015 aa20.94■□□□□ 0.94
CHTOP-201ENST00000368686 TTC41PQ6P2S7 1318 aa20.94■□□□□ 0.94
CHTOP-201ENST00000368686 SFPQP23246 707 aaKnown RBP eCLIP20.94■□□□□ 0.94
CHTOP-201ENST00000368686 PRPF40BQ6NWY9 871 aaKnown RBP20.94■□□□□ 0.94
CHTOP-201ENST00000368686 NBPF11Q86T75 865 aa20.94■□□□□ 0.94
CHTOP-201ENST00000368686 CEP57L1Q8IYX8 460 aa20.94■□□□□ 0.94
CHTOP-201ENST00000368686 DNAI1Q9UI46 699 aa20.94■□□□□ 0.94
CHTOP-201ENST00000368686 ZKSCAN1P17029 563 aaPredicted RBP20.93■□□□□ 0.94
CHTOP-201ENST00000368686 NAT10Q9H0A0 1025 aaKnown RBP20.93■□□□□ 0.94
CHTOP-201ENST00000368686 ITSN1Q15811 1721 aa20.93■□□□□ 0.94
CHTOP-201ENST00000368686 LMAN1P49257 510 aa20.93■□□□□ 0.94
CHTOP-201ENST00000368686 TTC31Q49AM3 519 aaPredicted RBP20.93■□□□□ 0.94
CHTOP-201ENST00000368686 NUTM2DQ5VT03 806 aaPredicted RBP20.93■□□□□ 0.94
CHTOP-201ENST00000368686 PRAM1Q96QH2 718 aa20.93■□□□□ 0.94
CHTOP-201ENST00000368686 ADAM21Q9UKJ8 722 aa20.93■□□□□ 0.94
CHTOP-201ENST00000368686 MAGEA9P43362 315 aa20.92■□□□□ 0.94
CHTOP-201ENST00000368686 ANKRD1Q15327 319 aa20.92■□□□□ 0.94
CHTOP-201ENST00000368686 LEKR1Q6ZMV7 388 aa20.92■□□□□ 0.94
CHTOP-201ENST00000368686 GPR161Q8N6U8 529 aaKnown RBP20.92■□□□□ 0.94
CHTOP-201ENST00000368686 CDK19Q9BWU1 502 aa20.92■□□□□ 0.94
CHTOP-201ENST00000368686 ARFGAP3Q9NP61 516 aa20.92■□□□□ 0.94
CHTOP-201ENST00000368686 JRKLQ9Y4A0 524 aa20.92■□□□□ 0.94
CHTOP-201ENST00000368686 ADCY9O60503 1353 aa20.92■□□□□ 0.94
CHTOP-201ENST00000368686 LARP1Q6PKG0 1096 aaKnown RBP20.92■□□□□ 0.94
CHTOP-201ENST00000368686 CFAP45Q9UL16 551 aa20.92■□□□□ 0.94
CHTOP-201ENST00000368686 EVCP57679 992 aa20.91■□□□□ 0.94
CHTOP-201ENST00000368686 ARMCX5Q6P1M9 558 aa20.91■□□□□ 0.94
CHTOP-201ENST00000368686 N4BP2Q86UW6 1770 aaPredicted RBP20.91■□□□□ 0.94
CHTOP-201ENST00000368686 PTH1RQ03431 593 aa20.9■□□□□ 0.94
CHTOP-201ENST00000368686 AOPEPQ8N6M6 819 aa20.9■□□□□ 0.94
CHTOP-201ENST00000368686 XRN1Q8IZH2 1706 aaKnown RBP20.9■□□□□ 0.94
CHTOP-201ENST00000368686 PSMA5P28066 241 aa20.9■□□□□ 0.94
CHTOP-201ENST00000368686 SSH3Q8TE77 659 aa20.9■□□□□ 0.94
CHTOP-201ENST00000368686 SYTL4Q96C24 671 aaPredicted RBP20.9■□□□□ 0.94
CHTOP-201ENST00000368686 CCDC34Q96HJ3 373 aa20.9■□□□□ 0.94
CHTOP-201ENST00000368686 CARD6Q9BX69 1037 aa20.9■□□□□ 0.94
CHTOP-201ENST00000368686 LOC102724159A0A0B4J2E5 919 aa20.89■□□□□ 0.94
CHTOP-201ENST00000368686 NECTIN1Q15223 517 aa20.89■□□□□ 0.94
CHTOP-201ENST00000368686 PWP2Q15269 919 aaKnown RBP20.89■□□□□ 0.94
CHTOP-201ENST00000368686 MCM10Q7L590 875 aa20.89■□□□□ 0.94
CHTOP-201ENST00000368686 SIRT1Q96EB6 747 aa20.89■□□□□ 0.94
CHTOP-201ENST00000368686 URI1O94763 535 aaPredicted RBP20.89■□□□□ 0.93
CHTOP-201ENST00000368686 PSEN1P49768 467 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 RESTQ13127 1097 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 RHPN1Q8TCX5 695 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 MAP3K5Q99683 1374 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 CRB1P82279 1406 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 SMC2O95347 1197 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 TMC6Q7Z403 805 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 FUT8Q9BYC5 575 aa20.88■□□□□ 0.93
CHTOP-201ENST00000368686 ZSCAN16Q9H4T2 348 aaPredicted RBP20.88■□□□□ 0.93
CHTOP-201ENST00000368686 RPS6KA5O75582 802 aa20.87■□□□□ 0.93
CHTOP-201ENST00000368686 JAKMIP3Q5VZ66 844 aa20.87■□□□□ 0.93
CHTOP-201ENST00000368686 TRIM65Q6PJ69 517 aa20.87■□□□□ 0.93
CHTOP-201ENST00000368686 CCDC73Q6ZRK6 1079 aa20.87■□□□□ 0.93
CHTOP-201ENST00000368686 CHMP4CQ96CF2 233 aa20.87■□□□□ 0.93
CHTOP-201ENST00000368686 ALDH8A1Q9H2A2 487 aaPredicted RBP20.87■□□□□ 0.93
CHTOP-201ENST00000368686 PARP3Q9Y6F1 533 aa20.87■□□□□ 0.93
CHTOP-201ENST00000368686 KINO60870 393 aaKnown RBP20.87■□□□□ 0.93
CHTOP-201ENST00000368686 PSME1Q06323 249 aa20.87■□□□□ 0.93
CHTOP-201ENST00000368686 CCAR1Q8IX12 1150 aaKnown RBP20.87■□□□□ 0.93
CHTOP-201ENST00000368686 USP42Q9H9J4 1324 aaKnown RBP20.87■□□□□ 0.93
CHTOP-201ENST00000368686 NRKQ7Z2Y5 1582 aa20.86■□□□□ 0.93
CHTOP-201ENST00000368686 EDC4Q6P2E9 1401 aaKnown RBP20.86■□□□□ 0.93
CHTOP-201ENST00000368686 SURF6O75683 361 aaKnown RBP20.85■□□□□ 0.93
CHTOP-201ENST00000368686 GLRX3O76003 335 aaKnown RBP20.85■□□□□ 0.93
CHTOP-201ENST00000368686 AXDND1Q5T1B0 1012 aaPredicted RBP20.85■□□□□ 0.93
CHTOP-201ENST00000368686 PACS2Q86VP3 889 aa20.85■□□□□ 0.93
CHTOP-201ENST00000368686 XPO4Q9C0E2 1151 aaKnown RBP20.85■□□□□ 0.93
CHTOP-201ENST00000368686 PXDNLA1KZ92 1463 aa20.85■□□□□ 0.93
CHTOP-201ENST00000368686 ATP2B1P20020 1258 aa20.85■□□□□ 0.93
CHTOP-201ENST00000368686 CREB3L3Q68CJ9 461 aa20.85■□□□□ 0.93
CHTOP-201ENST00000368686 PPM1EQ8WY54 764 aa20.85■□□□□ 0.93
CHTOP-201ENST00000368686 DNAJC5Q9H3Z4 198 aa20.85■□□□□ 0.93
CHTOP-201ENST00000368686 DEF6Q9H4E7 631 aa20.85■□□□□ 0.93
CHTOP-201ENST00000368686 UBTFL1P0CB47 393 aaPredicted RBP20.84■□□□□ 0.93
CHTOP-201ENST00000368686 FLIIQ13045 1269 aa20.84■□□□□ 0.93
CHTOP-201ENST00000368686 MPHOSPH8Q99549 860 aa20.84■□□□□ 0.93
CHTOP-201ENST00000368686 BPIFA3Q9BQP9 254 aa20.84■□□□□ 0.93
CHTOP-201ENST00000368686 RABGGTAQ92696 567 aa20.84■□□□□ 0.93
CHTOP-201ENST00000368686 HDAC5Q9UQL6 1122 aa20.84■□□□□ 0.93
CHTOP-201ENST00000368686 RBM8AQ9Y5S9 174 aaKnown RBP20.84■□□□□ 0.93
CHTOP-201ENST00000368686 MYH15Q9Y2K3 1946 aa20.83■□□□□ 0.93
CHTOP-201ENST00000368686 CLGNO14967 610 aa20.83■□□□□ 0.93
CHTOP-201ENST00000368686 POLA2Q14181 598 aa20.83■□□□□ 0.93
CHTOP-201ENST00000368686 BLOC1S2Q6QNY1 142 aa20.83■□□□□ 0.93
CHTOP-201ENST00000368686 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
CHTOP-201ENST00000368686 RSRC2Q7L4I2 434 aaKnown RBP20.83■□□□□ 0.93
CHTOP-201ENST00000368686 IFNKQ9P0W0 207 aa20.83■□□□□ 0.93
CHTOP-201ENST00000368686 H3BQF6 201 aa20.83■□□□□ 0.92
CHTOP-201ENST00000368686 FAM160A1Q05DH4 1040 aa20.83■□□□□ 0.92
CHTOP-201ENST00000368686 FCHSD1Q86WN1 690 aa20.83■□□□□ 0.92
CHTOP-201ENST00000368686 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.92
CHTOP-201ENST00000368686 MKRN1Q9UHC7 482 aaKnown RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms