RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 IARSP41252 1262 aaKnown RBP30.53■■■□□ 2.48
PFDN2-201ENST00000368010 SLC51AQ86UW1 340 aa30.53■■■□□ 2.48
PFDN2-201ENST00000368010 TMC4Q7Z404 712 aa30.52■■■□□ 2.48
PFDN2-201ENST00000368010 JARID2Q92833 1246 aaPredicted RBP30.52■■■□□ 2.48
PFDN2-201ENST00000368010 CDHR2Q9BYE9 1310 aa30.51■■■□□ 2.48
PFDN2-201ENST00000368010 PDE8AO60658 829 aa30.51■■■□□ 2.47
PFDN2-201ENST00000368010 SP8Q8IXZ3 490 aa30.51■■■□□ 2.47
PFDN2-201ENST00000368010 CDCA7LQ96GN5 454 aa30.51■■■□□ 2.47
PFDN2-201ENST00000368010 RRAGCQ9HB90 399 aa30.51■■■□□ 2.47
PFDN2-201ENST00000368010 LINS1Q8NG48 757 aa30.5■■■□□ 2.47
PFDN2-201ENST00000368010 CCDC152Q4G0S7 254 aa30.48■■■□□ 2.47
PFDN2-201ENST00000368010 C16orf71Q8IYS4 520 aaPredicted RBP30.48■■■□□ 2.47
PFDN2-201ENST00000368010 CELF1Q92879 486 aaKnown RBP30.48■■■□□ 2.47
PFDN2-201ENST00000368010 TOMM70O94826 608 aa30.47■■■□□ 2.47
PFDN2-201ENST00000368010 GCKRQ14397 625 aa30.47■■■□□ 2.47
PFDN2-201ENST00000368010 DPP8Q6V1X1 898 aaPredicted RBP30.46■■■□□ 2.47
PFDN2-201ENST00000368010 MPNDQ8N594 471 aa30.46■■■□□ 2.47
PFDN2-201ENST00000368010 SUPT20HQ8NEM7 779 aa30.46■■■□□ 2.47
PFDN2-201ENST00000368010 JDP2Q8WYK2 163 aa30.46■■■□□ 2.47
PFDN2-201ENST00000368010 F6X3S4 739 aa30.45■■■□□ 2.47
PFDN2-201ENST00000368010 UBE3BQ7Z3V4 1068 aa30.45■■■□□ 2.47
PFDN2-201ENST00000368010 H7C1W4 665 aa30.44■■■□□ 2.46
PFDN2-201ENST00000368010 VEGFAP15692 232 aaPredicted RBP30.44■■■□□ 2.46
PFDN2-201ENST00000368010 CTSWP56202 376 aa30.44■■■□□ 2.46
PFDN2-201ENST00000368010 TRMT2AQ8IZ69 625 aaKnown RBP30.44■■■□□ 2.46
PFDN2-201ENST00000368010 LARGE2Q8N3Y3 721 aa30.44■■■□□ 2.46
PFDN2-201ENST00000368010 TAF1P21675 1872 aa30.44■■■□□ 2.46
PFDN2-201ENST00000368010 DDNO94850 711 aaPredicted RBP30.43■■■□□ 2.46
PFDN2-201ENST00000368010 RPS8P62241 208 aaKnown RBP30.43■■■□□ 2.46
PFDN2-201ENST00000368010 CCDC85AQ96PX6 553 aaPredicted RBP30.43■■■□□ 2.46
PFDN2-201ENST00000368010 RTFDC1Q9BY42 306 aaPredicted RBP30.43■■■□□ 2.46
PFDN2-201ENST00000368010 SEC31BQ9NQW1 1179 aa30.43■■■□□ 2.46
PFDN2-201ENST00000368010 LRRC37AA6NMS7 1700 aa30.42■■■□□ 2.46
PFDN2-201ENST00000368010 PPIP5K2O43314 1243 aa30.42■■■□□ 2.46
PFDN2-201ENST00000368010 VPS33BQ9H267 617 aa30.42■■■□□ 2.46
PFDN2-201ENST00000368010 WDR90Q96KV7 1748 aa30.42■■■□□ 2.46
PFDN2-201ENST00000368010 FZD9O00144 591 aa30.41■■■□□ 2.46
PFDN2-201ENST00000368010 BEND3Q5T5X7 828 aa30.41■■■□□ 2.46
PFDN2-201ENST00000368010 MRPL50Q8N5N7 158 aaKnown RBP30.41■■■□□ 2.46
PFDN2-201ENST00000368010 ZNF541Q9H0D2 1346 aa30.41■■■□□ 2.46
PFDN2-201ENST00000368010 COL4A1P02462 1669 aa30.4■■■□□ 2.46
PFDN2-201ENST00000368010 RBM46Q8TBY0 533 aaKnown RBP30.4■■■□□ 2.46
PFDN2-201ENST00000368010 AOC3Q16853 763 aa30.39■■■□□ 2.46
PFDN2-201ENST00000368010 NIM1KQ8IY84 436 aa30.39■■■□□ 2.46
PFDN2-201ENST00000368010 SSH1Q8WYL5 1049 aa30.39■■■□□ 2.46
PFDN2-201ENST00000368010 COL4A5P29400 1685 aa30.39■■■□□ 2.45
PFDN2-201ENST00000368010 TTLL11Q8NHH1 800 aa30.38■■■□□ 2.45
PFDN2-201ENST00000368010 NSFL1CQ9UNZ2 370 aaKnown RBP30.38■■■□□ 2.45
PFDN2-201ENST00000368010 POTECB2RU33 542 aa30.37■■■□□ 2.45
PFDN2-201ENST00000368010 CT47B1P0C2W7 299 aaPredicted RBP30.37■■■□□ 2.45
PFDN2-201ENST00000368010 CASP7P55210 303 aa30.37■■■□□ 2.45
PFDN2-201ENST00000368010 EIF6P56537 245 aaKnown RBP30.37■■■□□ 2.45
PFDN2-201ENST00000368010 ALDH1L2Q3SY69 923 aa30.37■■■□□ 2.45
PFDN2-201ENST00000368010 SLC4A10Q6U841 1118 aa30.37■■■□□ 2.45
PFDN2-201ENST00000368010 PLA2G12BQ9BX93 195 aa30.37■■■□□ 2.45
PFDN2-201ENST00000368010 ANKRD18AQ8IVF6 992 aa30.36■■■□□ 2.45
PFDN2-201ENST00000368010 CDC5LQ99459 802 aaKnown RBP30.36■■■□□ 2.45
PFDN2-201ENST00000368010 PTPRCP08575 1304 aa30.36■■■□□ 2.45
PFDN2-201ENST00000368010 RTL9Q8NET4 1388 aa30.36■■■□□ 2.45
PFDN2-201ENST00000368010 KIAA2012Q0VF49 1180 aa30.35■■■□□ 2.45
PFDN2-201ENST00000368010 L3MBTL3Q96JM7 780 aaPredicted RBP30.35■■■□□ 2.45
PFDN2-201ENST00000368010 BCL2L13Q9BXK5 485 aa30.35■■■□□ 2.45
PFDN2-201ENST00000368010 GREM2Q9H772 168 aa30.35■■■□□ 2.45
PFDN2-201ENST00000368010 DUOX1Q9NRD9 1551 aa30.35■■■□□ 2.45
PFDN2-201ENST00000368010 IQCA1LA6NCM1 817 aa30.34■■■□□ 2.45
PFDN2-201ENST00000368010 GPSM2P81274 684 aa30.34■■■□□ 2.45
PFDN2-201ENST00000368010 GPC2Q8N158 579 aa30.34■■■□□ 2.45
PFDN2-201ENST00000368010 SRCIN1Q9C0H9 1055 aa30.34■■■□□ 2.45
PFDN2-201ENST00000368010 MYH3P11055 1940 aa30.34■■■□□ 2.45
PFDN2-201ENST00000368010 ALDH1L1O75891 902 aa30.33■■■□□ 2.45
PFDN2-201ENST00000368010 HNRNPUQ00839 825 aaKnown RBP eCLIP30.33■■■□□ 2.45
PFDN2-201ENST00000368010 SMC4Q9NTJ3 1288 aa30.33■■■□□ 2.45
PFDN2-201ENST00000368010 GRM8O00222 908 aa30.32■■■□□ 2.44
PFDN2-201ENST00000368010 FSTL1Q12841 308 aa30.32■■■□□ 2.44
PFDN2-201ENST00000368010 C6orf229H3BNL8 230 aa30.31■■■□□ 2.44
PFDN2-201ENST00000368010 HSPA6P17066 643 aa30.31■■■□□ 2.44
PFDN2-201ENST00000368010 SMC1BQ8NDV3 1235 aa30.31■■■□□ 2.44
PFDN2-201ENST00000368010 ZNRF3Q9ULT6 936 aa30.31■■■□□ 2.44
PFDN2-201ENST00000368010 C9orf78Q9NZ63 289 aaPredicted RBP30.3■■■□□ 2.44
PFDN2-201ENST00000368010 GJA3Q9Y6H8 435 aa30.3■■■□□ 2.44
PFDN2-201ENST00000368010 CSF1RP07333 972 aa30.29■■■□□ 2.44
PFDN2-201ENST00000368010 WASHC4Q2M389 1173 aa30.29■■■□□ 2.44
PFDN2-201ENST00000368010 EYA3Q99504 573 aa30.29■■■□□ 2.44
PFDN2-201ENST00000368010 PODXL2Q9NZ53 605 aa30.29■■■□□ 2.44
PFDN2-201ENST00000368010 ANKIB1Q9P2G1 1089 aa30.29■■■□□ 2.44
PFDN2-201ENST00000368010 POLLQ9UGP5 575 aa30.29■■■□□ 2.44
PFDN2-201ENST00000368010 LTBP1Q14766 1721 aa30.28■■■□□ 2.44
PFDN2-201ENST00000368010 FAM161AQ3B820 660 aa30.28■■■□□ 2.44
PFDN2-201ENST00000368010 TBC1D16Q8TBP0 767 aa30.28■■■□□ 2.44
PFDN2-201ENST00000368010 HACL1Q9UJ83 578 aa30.28■■■□□ 2.44
PFDN2-201ENST00000368010 ITGA6P23229 1130 aa30.27■■■□□ 2.44
PFDN2-201ENST00000368010 BSDC1Q9NW68 430 aaPredicted RBP30.27■■■□□ 2.44
PFDN2-201ENST00000368010 SCN4AP35499 1836 aa30.26■■■□□ 2.44
PFDN2-201ENST00000368010 IGHMBP2P38935 993 aaKnown RBP30.26■■■□□ 2.43
PFDN2-201ENST00000368010 TAF1DQ9H5J8 278 aaPredicted RBP30.26■■■□□ 2.43
PFDN2-201ENST00000368010 GGA1Q9UJY5 639 aa30.26■■■□□ 2.43
PFDN2-201ENST00000368010 XDHP47989 1333 aa30.25■■■□□ 2.43
PFDN2-201ENST00000368010 RIMBP2O15034 1052 aa30.25■■■□□ 2.43
PFDN2-201ENST00000368010 UFL1O94874 794 aa30.25■■■□□ 2.43
PFDN2-201ENST00000368010 FOXO4P98177 505 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms