RNA–Protein interactions for RNA: ENST00000367122.6

SYNJ2-204, Transcript of synaptojanin 2, human

TSL 1 (best) BASIC

Gene SYNJ2, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNJ2-204	ENST00000367122	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.67	□□□□□ -0.54
SYNJ2-204	ENST00000367122	OGFR	Q9NZT2	677 aa		11.67	□□□□□ -0.54
SYNJ2-204	ENST00000367122	TRIM6-TRIM34	B2RNG4	842 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	NEK4	P51957	841 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	CHAF1A	Q13111	956 aa	Predicted RBP	11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	CCDC183	Q5T5S1	534 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	USP48	Q86UV5	1035 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	TMEM87A	Q8NBN3	555 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	NCAPG	Q9BPX3	1015 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	TRIM34	Q9BYJ4	488 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	API5	Q9BZZ5	524 aa	Known RBP	11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	PNPLA6	Q8IY17	1366 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	NPHP3	Q7Z494	1330 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	TPM3	P06753	285 aa		11.66	□□□□□ -0.54
SYNJ2-204	ENST00000367122	DIAPH1	O60610	1272 aa	Known RBP	11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	PARN	O95453	639 aa	Known RBP	11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	TSPYL6	Q8N831	410 aa		11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	GABBR1	Q9UBS5	961 aa		11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	SYNPO2	Q9UMS6	1093 aa		11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	FCHSD2	O94868	740 aa		11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	SYCP1	Q15431	976 aa		11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	ANKRD44	Q8N8A2	993 aa		11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	NRBP1	Q9UHY1	535 aa		11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	USP31	Q70CQ4	1352 aa		11.65	□□□□□ -0.54
SYNJ2-204	ENST00000367122	KCNJ4	P48050	445 aa		11.65	□□□□□ -0.55
SYNJ2-204	ENST00000367122	GABPB1	Q06547	395 aa	Predicted RBP	11.65	□□□□□ -0.55
SYNJ2-204	ENST00000367122	GPATCH3	Q96I76	525 aa		11.65	□□□□□ -0.55
SYNJ2-204	ENST00000367122	KCNF1	Q9H3M0	494 aa		11.65	□□□□□ -0.55
SYNJ2-204	ENST00000367122	OVOS2	A0A0J9YW53	1432 aa		11.65	□□□□□ -0.55
SYNJ2-204	ENST00000367122	OVOS2	Q6IE36	1432 aa		11.65	□□□□□ -0.55
SYNJ2-204	ENST00000367122	ATP10D	Q9P241	1426 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	FAM200B	P0CF97	657 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	MX1	P20591	662 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	RANBP17	Q9H2T7	1088 aa	Known RBP	11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	PIK3C2A	O00443	1686 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	RTL1	A6NKG5	1358 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	WDHD1	O75717	1129 aa	Predicted RBP	11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	CSB-PGBD3	P0DP91	1061 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	HCLS1	P14317	486 aa	Predicted RBP	11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	GYS2	P54840	703 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	POLK	Q9UBT6	870 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	PYCARD	Q9ULZ3	195 aa		11.64	□□□□□ -0.55
SYNJ2-204	ENST00000367122	MICALL1	Q8N3F8	863 aa		11.63	□□□□□ -0.55
SYNJ2-204	ENST00000367122	IFT57	Q9NWB7	429 aa		11.63	□□□□□ -0.55
SYNJ2-204	ENST00000367122	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.63	□□□□□ -0.55
SYNJ2-204	ENST00000367122	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.63	□□□□□ -0.55
SYNJ2-204	ENST00000367122	GDPD2	Q9HCC8	539 aa		11.63	□□□□□ -0.55
SYNJ2-204	ENST00000367122	RBM5	P52756	815 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	1e-7	■■■□□ 16.7
SYNJ2-204	ENST00000367122	GNAI1	P63096	354 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	RRS1	Q15050	365 aa	Known RBP	11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	ZC3H15	Q8WU90	426 aa	Known RBP	11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	WDR33	Q9C0J8	1336 aa	Known RBP	11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	AATK	Q6ZMQ8	1374 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	IPO7	O95373	1038 aa	Known RBP	11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	NCBP1	Q09161	790 aa	Known RBP	11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	IL17RA	Q96F46	866 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	FUCA2	Q9BTY2	467 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	CTNNA3	Q9UI47	895 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	ERICH4	A6NGS2	130 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	BIRC2	Q13490	618 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	TSPYL1	Q9H0U9	437 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	OSBPL3	Q9H4L5	887 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	EMILIN1	Q9Y6C2	1016 aa		11.62	□□□□□ -0.55
SYNJ2-204	ENST00000367122	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	CTAGE5	O15320	804 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	TOM1	O60784	492 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	NFE2L2	Q16236	605 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	C11orf96	Q7Z7L8	435 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	GNL3L	Q9NVN8	582 aa	Known RBP	11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	DONSON	Q9NYP3	566 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	SBNO1	A3KN83	1393 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	TCHH	Q07283	1943 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	KLHL33	A6NCF5	533 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	RGS12	O14924	1447 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	AP5Z1	O43299	807 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	PRKAR2B	P31323	418 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	CD151	P48509	253 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	TWISTNB	Q3B726	338 aa	Predicted RBP	11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	CEP85	Q6P2H3	762 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	PXDN	Q92626	1479 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	MBIP	Q9NS73	344 aa		11.61	□□□□□ -0.55
SYNJ2-204	ENST00000367122	MAP2	P11137	1827 aa	Known RBP	11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	SOS2	Q07890	1332 aa	Predicted RBP	11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	SLFN14	P0C7P3	912 aa		11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	DRC1	Q96MC2	740 aa		11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	DDX41	Q9UJV9	622 aa	Known RBP	11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	SPATA31A3	Q5VYP0	1347 aa		11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	GOLGA6L6	A8MZA4	724 aa		11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	ELL2	O00472	640 aa	Predicted RBP	11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	UBE2H	P62256	183 aa		11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	AMOTL1	Q8IY63	956 aa		11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	SRCIN1	Q9C0H9	1055 aa		11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.6	□□□□□ -0.55
SYNJ2-204	ENST00000367122	UBAP1L	F5GYI3	381 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms