RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ZNF589Q86UQ0 364 aaPredicted RBP16.09■□□□□ 0.17
PRKN-205ENST00000366897 PGBD1Q96JS3 809 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 ZNF165P49910 485 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 ZNF75DP51815 510 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
PRKN-205ENST00000366897 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 FSD1Q9BTV5 496 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 TM6SF1Q9BZW5 370 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 FTOQ9C0B1 505 aaKnown RBP eCLIP16.09■□□□□ 0.17
PRKN-205ENST00000366897 CTIFO43310 598 aaKnown RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 TOB2Q14106 344 aaPredicted RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 ERCC4Q92889 916 aaPredicted RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 USP27XA6NNY8 438 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 SASH1O94885 1247 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 ESCO1Q5FWF5 840 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 UTP14CQ5TAP6 766 aaKnown RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 COL16A1Q07092 1604 aaPredicted RBP16.07■□□□□ 0.16
PRKN-205ENST00000366897 TPM3P06753 285 aa16.07■□□□□ 0.16
PRKN-205ENST00000366897 TPD52L1Q16890 204 aaPredicted RBP16.07■□□□□ 0.16
PRKN-205ENST00000366897 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
PRKN-205ENST00000366897 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
PRKN-205ENST00000366897 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
PRKN-205ENST00000366897 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
PRKN-205ENST00000366897 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
PRKN-205ENST00000366897 PXDNLA1KZ92 1463 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
PRKN-205ENST00000366897 TEFQ10587 303 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 NBPF6Q5VWK0 638 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 NBPF4Q96M43 638 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 CCDC129Q6ZRS4 1044 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 BRF1Q92994 677 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 SUCLG2Q96I99 432 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 CLSTN2Q9H4D0 955 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 JCADQ9P266 1359 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 RPS6KB1P23443 525 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 C11orf57Q6ZUT1 292 aaPredicted RBP16.05■□□□□ 0.16
PRKN-205ENST00000366897 KCNB2Q92953 911 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 BICC1Q9H694 974 aaKnown RBP16.05■□□□□ 0.16
PRKN-205ENST00000366897 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
PRKN-205ENST00000366897 NPHP3Q7Z494 1330 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 PLA2G4DQ86XP0 818 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
PRKN-205ENST00000366897 HSP90B1P14625 803 aaKnown RBP16.04■□□□□ 0.16
PRKN-205ENST00000366897 PDCP20941 246 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 USP16Q9Y5T5 823 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 ELP1O95163 1332 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 NPHP1O15259 732 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 PSMA5P28066 241 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 G3BP1Q13283 466 aaKnown RBP eCLIP16.03■□□□□ 0.16
PRKN-205ENST00000366897 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 SEC62Q99442 399 aaKnown RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 DDX19AQ9NUU7 478 aaKnown RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 GTPBP4Q9BZE4 634 aaKnown RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 H3BQV1 296 aa16.02■□□□□ 0.16
PRKN-205ENST00000366897 IFFO2Q5TF58 517 aa16.02■□□□□ 0.16
PRKN-205ENST00000366897 TDRD7Q8NHU6 1098 aaKnown RBP16.02■□□□□ 0.16
PRKN-205ENST00000366897 LRRC37A3O60309 1634 aa16.02■□□□□ 0.16
PRKN-205ENST00000366897 NHSL1Q5SYE7 1610 aa16.02■□□□□ 0.16
PRKN-205ENST00000366897 SMTNL1A8MU46 457 aa16.02■□□□□ 0.15
PRKN-205ENST00000366897 SLFNL1Q499Z3 407 aa16.02■□□□□ 0.15
PRKN-205ENST00000366897 GUCY1B3Q02153 619 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 CTNNA3Q9UI47 895 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 NAP1L2Q9ULW6 460 aaPredicted RBP16.01■□□□□ 0.15
PRKN-205ENST00000366897 MTX1Q13505 466 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 ZNF771Q7L3S4 317 aaPredicted RBP16.01■□□□□ 0.15
PRKN-205ENST00000366897 TOPAZ1Q8N9V7 1692 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
PRKN-205ENST00000366897 RNF20Q5VTR2 975 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
PRKN-205ENST00000366897 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
PRKN-205ENST00000366897 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
PRKN-205ENST00000366897 RESTQ13127 1097 aa16■□□□□ 0.15
PRKN-205ENST00000366897 CEP135Q66GS9 1140 aa16■□□□□ 0.15
PRKN-205ENST00000366897 Q6ZUG5 572 aa16■□□□□ 0.15
PRKN-205ENST00000366897 ILDR2Q71H61 639 aa16■□□□□ 0.15
PRKN-205ENST00000366897 CACNA1FO60840 1977 aa16■□□□□ 0.15
PRKN-205ENST00000366897 COL15A1P39059 1388 aa16■□□□□ 0.15
PRKN-205ENST00000366897 PIP4K2AP48426 406 aaPredicted RBP16■□□□□ 0.15
PRKN-205ENST00000366897 FGD1P98174 961 aa16■□□□□ 0.15
PRKN-205ENST00000366897 ERC1Q8IUD2 1116 aa16■□□□□ 0.15
PRKN-205ENST00000366897 ZNF215Q9UL58 517 aaPredicted RBP16■□□□□ 0.15
PRKN-205ENST00000366897 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
PRKN-205ENST00000366897 GRM8O00222 908 aa15.99■□□□□ 0.15
PRKN-205ENST00000366897 TAF5LO75529 589 aa15.99■□□□□ 0.15
PRKN-205ENST00000366897 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
PRKN-205ENST00000366897 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
PRKN-205ENST00000366897 DNAJC2Q99543 621 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms