RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 BRPF1P55201 1214 aaPredicted RBP19.6■□□□□ 0.73
PRKN-203ENST00000366894 RPGRQ92834 1020 aaKnown RBP19.6■□□□□ 0.73
PRKN-203ENST00000366894 SMC4Q9NTJ3 1288 aa19.6■□□□□ 0.73
PRKN-203ENST00000366894 CCDC93Q567U6 631 aa19.59■□□□□ 0.73
PRKN-203ENST00000366894 SOGA3Q5TF21 947 aa19.59■□□□□ 0.73
PRKN-203ENST00000366894 DPY19L2Q6NUT2 758 aa19.59■□□□□ 0.73
PRKN-203ENST00000366894 DNAAF4Q8WXU2 420 aa19.59■□□□□ 0.73
PRKN-203ENST00000366894 RBM17Q96I25 401 aaKnown RBP19.59■□□□□ 0.73
PRKN-203ENST00000366894 CWC25Q9NXE8 425 aaPredicted RBP19.59■□□□□ 0.73
PRKN-203ENST00000366894 IGKV5-2P06315 115 aa19.58■□□□□ 0.72
PRKN-203ENST00000366894 SSH1Q8WYL5 1049 aa19.58■□□□□ 0.72
PRKN-203ENST00000366894 TAOK3Q9H2K8 898 aa19.58■□□□□ 0.72
PRKN-203ENST00000366894 ABCC4O15439 1325 aa19.57■□□□□ 0.72
PRKN-203ENST00000366894 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
PRKN-203ENST00000366894 MRPL50Q8N5N7 158 aaKnown RBP19.57■□□□□ 0.72
PRKN-203ENST00000366894 ZBTB38Q8NAP3 1195 aaPredicted RBP19.57■□□□□ 0.72
PRKN-203ENST00000366894 LINS1Q8NG48 757 aa19.57■□□□□ 0.72
PRKN-203ENST00000366894 ARHGAP45Q92619 1136 aa19.57■□□□□ 0.72
PRKN-203ENST00000366894 HDAC5Q9UQL6 1122 aa19.57■□□□□ 0.72
PRKN-203ENST00000366894 KIF16BQ96L93 1317 aa19.56■□□□□ 0.72
PRKN-203ENST00000366894 POTECB2RU33 542 aa19.56■□□□□ 0.72
PRKN-203ENST00000366894 API5Q9BZZ5 524 aaKnown RBP19.56■□□□□ 0.72
PRKN-203ENST00000366894 TMX4Q9H1E5 349 aaPredicted RBP19.56■□□□□ 0.72
PRKN-203ENST00000366894 DICER1Q9UPY3 1922 aaKnown RBP19.56■□□□□ 0.72
PRKN-203ENST00000366894 COL4A1P02462 1669 aa19.56■□□□□ 0.72
PRKN-203ENST00000366894 IRS4O14654 1257 aaPredicted RBP19.55■□□□□ 0.72
PRKN-203ENST00000366894 PPEF1O14829 653 aaPredicted RBP19.55■□□□□ 0.72
PRKN-203ENST00000366894 RARSP54136 660 aaKnown RBP19.55■□□□□ 0.72
PRKN-203ENST00000366894 FKBP4Q02790 459 aaKnown RBP eCLIP19.55■□□□□ 0.72
PRKN-203ENST00000366894 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
PRKN-203ENST00000366894 TAF1P21675 1872 aa19.54■□□□□ 0.72
PRKN-203ENST00000366894 PCCAP05165 728 aaPredicted RBP19.54■□□□□ 0.72
PRKN-203ENST00000366894 SF3B3Q15393 1217 aaKnown RBP19.54■□□□□ 0.72
PRKN-203ENST00000366894 RTKN2Q8IZC4 609 aa19.54■□□□□ 0.72
PRKN-203ENST00000366894 ALDH1L1O75891 902 aa19.53■□□□□ 0.72
PRKN-203ENST00000366894 CWF19L2Q2TBE0 894 aaKnown RBP19.53■□□□□ 0.72
PRKN-203ENST00000366894 ZNF277Q9NRM2 450 aaPredicted RBP19.53■□□□□ 0.72
PRKN-203ENST00000366894 NEURL1BA8MQ27 555 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 MS4A1P11836 297 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 GRIPAP1Q4V328 841 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 CC2D2BQ6DHV5 1058 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 CHADLQ6NUI6 762 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 SLC4A10Q6U841 1118 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 SRCIN1Q9C0H9 1055 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 ATP6V0A2Q9Y487 856 aa19.52■□□□□ 0.72
PRKN-203ENST00000366894 GRAPQ13588 217 aa19.51■□□□□ 0.71
PRKN-203ENST00000366894 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
PRKN-203ENST00000366894 GRAPLQ8TC17 118 aaPredicted RBP19.51■□□□□ 0.71
PRKN-203ENST00000366894 PSMD1Q99460 953 aa19.51■□□□□ 0.71
PRKN-203ENST00000366894 COL4A5P29400 1685 aa19.5■□□□□ 0.71
PRKN-203ENST00000366894 F6X3S4 739 aa19.5■□□□□ 0.71
PRKN-203ENST00000366894 BBOX1O75936 387 aa19.5■□□□□ 0.71
PRKN-203ENST00000366894 CCT4P50991 539 aaKnown RBP19.5■□□□□ 0.71
PRKN-203ENST00000366894 C9orf78Q9NZ63 289 aaPredicted RBP19.5■□□□□ 0.71
PRKN-203ENST00000366894 NOB1Q9ULX3 412 aaKnown RBP19.5■□□□□ 0.71
PRKN-203ENST00000366894 CDHR2Q9BYE9 1310 aa19.5■□□□□ 0.71
PRKN-203ENST00000366894 GCKRQ14397 625 aa19.49■□□□□ 0.71
PRKN-203ENST00000366894 SP8Q8IXZ3 490 aa19.49■□□□□ 0.71
PRKN-203ENST00000366894 CELF1Q92879 486 aaKnown RBP19.49■□□□□ 0.71
PRKN-203ENST00000366894 BCL2L13Q9BXK5 485 aa19.49■□□□□ 0.71
PRKN-203ENST00000366894 MKRN1Q9UHC7 482 aaKnown RBP19.49■□□□□ 0.71
PRKN-203ENST00000366894 LRRC37AA6NMS7 1700 aa19.48■□□□□ 0.71
PRKN-203ENST00000366894 H7C1W4 665 aa19.48■□□□□ 0.71
PRKN-203ENST00000366894 PDE8AO60658 829 aa19.48■□□□□ 0.71
PRKN-203ENST00000366894 IARSP41252 1262 aaKnown RBP19.48■□□□□ 0.71
PRKN-203ENST00000366894 BEND3Q5T5X7 828 aa19.48■□□□□ 0.71
PRKN-203ENST00000366894 TMC4Q7Z404 712 aa19.48■□□□□ 0.71
PRKN-203ENST00000366894 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
PRKN-203ENST00000366894 DDNO94850 711 aaPredicted RBP19.47■□□□□ 0.71
PRKN-203ENST00000366894 CASP7P55210 303 aa19.47■□□□□ 0.71
PRKN-203ENST00000366894 CCDC152Q4G0S7 254 aa19.47■□□□□ 0.71
PRKN-203ENST00000366894 ZKSCAN2Q63HK3 967 aa19.47■□□□□ 0.71
PRKN-203ENST00000366894 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
PRKN-203ENST00000366894 SEC31BQ9NQW1 1179 aa19.47■□□□□ 0.71
PRKN-203ENST00000366894 IQCA1LA6NCM1 817 aa19.46■□□□□ 0.71
PRKN-203ENST00000366894 FRAT1Q92837 279 aaPredicted RBP19.46■□□□□ 0.71
PRKN-203ENST00000366894 DUOX1Q9NRD9 1551 aa19.45■□□□□ 0.7
PRKN-203ENST00000366894 POTEIP0CG38 1075 aa19.45■□□□□ 0.7
PRKN-203ENST00000366894 POTEJP0CG39 1038 aa19.45■□□□□ 0.7
PRKN-203ENST00000366894 ATF7IPQ6VMQ6 1270 aa19.45■□□□□ 0.7
PRKN-203ENST00000366894 UBE3BQ7Z3V4 1068 aa19.45■□□□□ 0.7
PRKN-203ENST00000366894 RTFDC1Q9BY42 306 aaPredicted RBP19.45■□□□□ 0.7
PRKN-203ENST00000366894 CNTNAP1P78357 1384 aa19.44■□□□□ 0.7
PRKN-203ENST00000366894 CTSWP56202 376 aa19.44■□□□□ 0.7
PRKN-203ENST00000366894 CCDC85AQ96PX6 553 aaPredicted RBP19.44■□□□□ 0.7
PRKN-203ENST00000366894 RCAN3Q9UKA8 241 aa19.44■□□□□ 0.7
PRKN-203ENST00000366894 ZNF541Q9H0D2 1346 aa19.44■□□□□ 0.7
PRKN-203ENST00000366894 FZD9O00144 591 aa19.43■□□□□ 0.7
PRKN-203ENST00000366894 GRM8O00222 908 aa19.43■□□□□ 0.7
PRKN-203ENST00000366894 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
PRKN-203ENST00000366894 LDHDQ86WU2 507 aa19.43■□□□□ 0.7
PRKN-203ENST00000366894 MPNDQ8N594 471 aa19.43■□□□□ 0.7
PRKN-203ENST00000366894 TTLL11Q8NHH1 800 aa19.43■□□□□ 0.7
PRKN-203ENST00000366894 CHMP4BQ9H444 224 aaKnown RBP19.43■□□□□ 0.7
PRKN-203ENST00000366894 LTBP1Q14766 1721 aa19.42■□□□□ 0.7
PRKN-203ENST00000366894 SCN4AP35499 1836 aa19.42■□□□□ 0.7
PRKN-203ENST00000366894 BCAR3O75815 825 aa19.42■□□□□ 0.7
PRKN-203ENST00000366894 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
PRKN-203ENST00000366894 AIDAQ96BJ3 306 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms