RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 ATP6V0A2Q9Y487 856 aa11.85□□□□□ -0.51
MRPL55-216ENST00000366744 LTBP1Q14766 1721 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 NEURL1BA8MQ27 555 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 SF3B3Q15393 1217 aaKnown RBP11.84□□□□□ -0.51
MRPL55-216ENST00000366744 OLFM4Q6UX06 510 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 G2E3Q7L622 706 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 MIER1Q8N108 512 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 SYNE4Q8N205 404 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 LARGE2Q8N3Y3 721 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 A0A1B0GUL6 1792 aa11.84□□□□□ -0.51
MRPL55-216ENST00000366744 PPIP5K2O43314 1243 aa11.83□□□□□ -0.52
MRPL55-216ENST00000366744 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
MRPL55-216ENST00000366744 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
MRPL55-216ENST00000366744 NIM1KQ8IY84 436 aa11.83□□□□□ -0.52
MRPL55-216ENST00000366744 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
MRPL55-216ENST00000366744 SNED1Q8TER0 1413 aa11.83□□□□□ -0.52
MRPL55-216ENST00000366744 PTPRCP08575 1304 aa11.83□□□□□ -0.52
MRPL55-216ENST00000366744 PSME4Q14997 1843 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 IQCA1LA6NCM1 817 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 IGKV5-2P06315 115 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-216ENST00000366744 CTSWP56202 376 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
MRPL55-216ENST00000366744 HNRNPUQ00839 825 aaKnown RBP eCLIP11.82□□□□□ -0.52
MRPL55-216ENST00000366744 SLFN5Q08AF3 891 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 SP8Q8IXZ3 490 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 MPNDQ8N594 471 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 SMC4Q9NTJ3 1288 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 DUOX1Q9NRD9 1551 aa11.82□□□□□ -0.52
MRPL55-216ENST00000366744 KIF3CO14782 793 aa11.81□□□□□ -0.52
MRPL55-216ENST00000366744 TOMM70O94826 608 aa11.81□□□□□ -0.52
MRPL55-216ENST00000366744 VEGFAP15692 232 aaPredicted RBP11.81□□□□□ -0.52
MRPL55-216ENST00000366744 PRELPP51888 382 aa11.81□□□□□ -0.52
MRPL55-216ENST00000366744 GCKRQ14397 625 aa11.81□□□□□ -0.52
MRPL55-216ENST00000366744 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
MRPL55-216ENST00000366744 VPS33BQ9H267 617 aa11.81□□□□□ -0.52
MRPL55-216ENST00000366744 LMOD1P29536 600 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-216ENST00000366744 ALDH1L2Q3SY69 923 aa11.8□□□□□ -0.52
MRPL55-216ENST00000366744 CELF1Q92879 486 aaKnown RBP11.8□□□□□ -0.52
MRPL55-216ENST00000366744 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-216ENST00000366744 EYA3Q99504 573 aa11.8□□□□□ -0.52
MRPL55-216ENST00000366744 SRCIN1Q9C0H9 1055 aa11.8□□□□□ -0.52
MRPL55-216ENST00000366744 RRAGCQ9HB90 399 aa11.8□□□□□ -0.52
MRPL55-216ENST00000366744 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-216ENST00000366744 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 COL4A1P02462 1669 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 F6X3S4 739 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 G3V3G9 751 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 IGHMBP2P38935 993 aaKnown RBP11.79□□□□□ -0.52
MRPL55-216ENST00000366744 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
MRPL55-216ENST00000366744 AOC3Q16853 763 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 GPC2Q8N158 579 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 SMC1BQ8NDV3 1235 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
MRPL55-216ENST00000366744 JARID2Q92833 1246 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-216ENST00000366744 CDCA7LQ96GN5 454 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 BCL2L13Q9BXK5 485 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
MRPL55-216ENST00000366744 CHMP3Q9Y3E7 222 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 KIF16BQ96L93 1317 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 ZNF541Q9H0D2 1346 aa11.79□□□□□ -0.52
MRPL55-216ENST00000366744 COL4A5P29400 1685 aa11.78□□□□□ -0.52
MRPL55-216ENST00000366744 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
MRPL55-216ENST00000366744 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
MRPL55-216ENST00000366744 GJA3Q9Y6H8 435 aa11.78□□□□□ -0.52
MRPL55-216ENST00000366744 H7C1W4 665 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 FZD9O00144 591 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 GRM8O00222 908 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 DDNO94850 711 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-216ENST00000366744 UFL1O94874 794 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 KIAA2012Q0VF49 1180 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 FSTL1Q12841 308 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 WASHC4Q2M389 1173 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 TAF7LQ5H9L4 462 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 BEND3Q5T5X7 828 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 MRPL50Q8N5N7 158 aaKnown RBP11.77□□□□□ -0.53
MRPL55-216ENST00000366744 SSH1Q8WYL5 1049 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 MPHOSPH8Q99549 860 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-216ENST00000366744 SEC31BQ9NQW1 1179 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 MYH13Q9UKX3 1938 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 XDHP47989 1333 aa11.77□□□□□ -0.53
MRPL55-216ENST00000366744 ANKRD18BA2A2Z9 1011 aa11.76□□□□□ -0.53
MRPL55-216ENST00000366744 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
MRPL55-216ENST00000366744 TTLL11Q8NHH1 800 aa11.76□□□□□ -0.53
MRPL55-216ENST00000366744 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-216ENST00000366744 PLA2G12BQ9BX93 195 aa11.76□□□□□ -0.53
MRPL55-216ENST00000366744 GREM2Q9H772 168 aa11.76□□□□□ -0.53
MRPL55-216ENST00000366744 HACL1Q9UJ83 578 aa11.76□□□□□ -0.53
MRPL55-216ENST00000366744 GGA1Q9UJY5 639 aa11.76□□□□□ -0.53
MRPL55-216ENST00000366744 ZNRF3Q9ULT6 936 aa11.76□□□□□ -0.53
MRPL55-216ENST00000366744 TRPM7Q96QT4 1865 aa11.75□□□□□ -0.53
MRPL55-216ENST00000366744 HSPA6P17066 643 aa11.75□□□□□ -0.53
MRPL55-216ENST00000366744 ITGA6P23229 1130 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms