RNA–Protein interactions for RNA: ENST00000366181.2

LINC01562-201, Transcript of long intergenic non-protein coding RNA 1562, humanhuman

TSL 2 BASIC

Gene LINC01562, Length 2,366 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01562-201ENST00000366181 CNBD1Q8NA66 436 aa13.73□□□□□ -0.21
LINC01562-201ENST00000366181 SEC31BQ9NQW1 1179 aa13.73□□□□□ -0.21
LINC01562-201ENST00000366181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
LINC01562-201ENST00000366181 IBTKQ9P2D0 1353 aaPredicted RBP13.72□□□□□ -0.21
LINC01562-201ENST00000366181 CTSWP56202 376 aa13.72□□□□□ -0.21
LINC01562-201ENST00000366181 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
LINC01562-201ENST00000366181 TTLL11Q8NHH1 800 aa13.72□□□□□ -0.21
LINC01562-201ENST00000366181 CHMP4BQ9H444 224 aaKnown RBP13.72□□□□□ -0.21
LINC01562-201ENST00000366181 SMARCA5O60264 1052 aaPredicted RBP13.72□□□□□ -0.21
LINC01562-201ENST00000366181 HDAC1Q13547 482 aaPredicted RBP13.72□□□□□ -0.21
LINC01562-201ENST00000366181 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
LINC01562-201ENST00000366181 NLGN1Q8N2Q7 840 aa13.72□□□□□ -0.21
LINC01562-201ENST00000366181 RFX5P48382 616 aaPredicted RBP13.71□□□□□ -0.21
LINC01562-201ENST00000366181 POLA2Q14181 598 aa13.71□□□□□ -0.21
LINC01562-201ENST00000366181 SSH3Q8TE77 659 aa13.71□□□□□ -0.21
LINC01562-201ENST00000366181 PDE8AO60658 829 aa13.71□□□□□ -0.22
LINC01562-201ENST00000366181 TPTE2Q6XPS3 522 aa13.71□□□□□ -0.22
LINC01562-201ENST00000366181 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.22
LINC01562-201ENST00000366181 RGL2O15211 777 aa13.7□□□□□ -0.22
LINC01562-201ENST00000366181 MTX1Q13505 466 aa13.7□□□□□ -0.22
LINC01562-201ENST00000366181 AAMPQ13685 434 aa13.7□□□□□ -0.22
LINC01562-201ENST00000366181 PUS3Q9BZE2 481 aaKnown RBP13.7□□□□□ -0.22
LINC01562-201ENST00000366181 RWDD1Q9H446 243 aaPredicted RBP13.7□□□□□ -0.22
LINC01562-201ENST00000366181 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
LINC01562-201ENST00000366181 NYXQ9GZU5 481 aa13.69□□□□□ -0.22
LINC01562-201ENST00000366181 SURF6O75683 361 aaKnown RBP13.69□□□□□ -0.22
LINC01562-201ENST00000366181 CSF1RP07333 972 aa13.69□□□□□ -0.22
LINC01562-201ENST00000366181 ITGA6P23229 1130 aa13.69□□□□□ -0.22
LINC01562-201ENST00000366181 PTPN12Q05209 780 aaKnown RBP13.69□□□□□ -0.22
LINC01562-201ENST00000366181 KIF13BQ9NQT8 1826 aa13.69□□□□□ -0.22
LINC01562-201ENST00000366181 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
LINC01562-201ENST00000366181 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
LINC01562-201ENST00000366181 LRRC24Q50LG9 513 aa13.68□□□□□ -0.22
LINC01562-201ENST00000366181 SLX4Q8IY92 1834 aa13.68□□□□□ -0.22
LINC01562-201ENST00000366181 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
LINC01562-201ENST00000366181 KIAA1551Q9HCM1 1747 aa13.68□□□□□ -0.22
LINC01562-201ENST00000366181 CENPQQ7L2Z9 268 aaPredicted RBP13.67□□□□□ -0.22
LINC01562-201ENST00000366181 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 IL1RAPL2Q9NP60 686 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 PDZRN3Q9UPQ7 1066 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 LRP5O75197 1615 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 HMMRO75330 724 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 SLC10A5Q5PT55 438 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 SMC5Q8IY18 1101 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 OTUD7AQ8TE49 926 aaPredicted RBP13.67□□□□□ -0.22
LINC01562-201ENST00000366181 DLEC1Q9Y238 1755 aa13.67□□□□□ -0.22
LINC01562-201ENST00000366181 ST5P78524 1137 aa13.66□□□□□ -0.22
LINC01562-201ENST00000366181 ANKRD45Q5TZF3 282 aa13.66□□□□□ -0.22
LINC01562-201ENST00000366181 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
LINC01562-201ENST00000366181 CELF1Q92879 486 aaKnown RBP13.66□□□□□ -0.22
LINC01562-201ENST00000366181 IFIT5Q13325 482 aaKnown RBP13.66□□□□□ -0.22
LINC01562-201ENST00000366181 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
LINC01562-201ENST00000366181 BRCA1P38398 1863 aaKnown RBP13.65□□□□□ -0.22
LINC01562-201ENST00000366181 CHRNA5P30532 468 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 OS9Q13438 667 aaPredicted RBP13.65□□□□□ -0.22
LINC01562-201ENST00000366181 NLRP3Q96P20 1036 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 WTIPA6NIX2 430 aaPredicted RBP13.65□□□□□ -0.22
LINC01562-201ENST00000366181 SNAP23O00161 211 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 SASH1O94885 1247 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 PDE4AP27815 886 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 RGS3P49796 1198 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 CCDC152Q4G0S7 254 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 ATG9AQ7Z3C6 839 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
LINC01562-201ENST00000366181 AK9Q5TCS8 1911 aa13.64□□□□□ -0.23
LINC01562-201ENST00000366181 MYO5AQ9Y4I1 1855 aaKnown RBP13.64□□□□□ -0.23
LINC01562-201ENST00000366181 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
LINC01562-201ENST00000366181 KLHL34Q8N239 644 aa13.64□□□□□ -0.23
LINC01562-201ENST00000366181 HELBQ8NG08 1087 aaPredicted RBP13.64□□□□□ -0.23
LINC01562-201ENST00000366181 MTFR1LQ9H019 292 aa13.64□□□□□ -0.23
LINC01562-201ENST00000366181 ANKRD18BA2A2Z9 1011 aa13.64□□□□□ -0.23
LINC01562-201ENST00000366181 SF3B3Q15393 1217 aaKnown RBP13.64□□□□□ -0.23
LINC01562-201ENST00000366181 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
LINC01562-201ENST00000366181 COPRSQ9NQ92 184 aa13.64□□□□□ -0.23
LINC01562-201ENST00000366181 HDAC5Q9UQL6 1122 aa13.64□□□□□ -0.23
LINC01562-201ENST00000366181 OLFM4Q6UX06 510 aa13.63□□□□□ -0.23
LINC01562-201ENST00000366181 SLC16A10Q8TF71 515 aa13.63□□□□□ -0.23
LINC01562-201ENST00000366181 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
LINC01562-201ENST00000366181 PTGER2P43116 358 aa13.63□□□□□ -0.23
LINC01562-201ENST00000366181 TFCP2Q12800 502 aa13.63□□□□□ -0.23
LINC01562-201ENST00000366181 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
LINC01562-201ENST00000366181 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
LINC01562-201ENST00000366181 C10orf71Q711Q0 1435 aa13.62□□□□□ -0.23
LINC01562-201ENST00000366181 NUCB1Q02818 461 aa13.62□□□□□ -0.23
LINC01562-201ENST00000366181 LDHAL6AQ6ZMR3 332 aa13.62□□□□□ -0.23
LINC01562-201ENST00000366181 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
LINC01562-201ENST00000366181 GCC1Q96CN9 775 aa13.62□□□□□ -0.23
LINC01562-201ENST00000366181 TLR7Q9NYK1 1049 aaKnown RBP13.62□□□□□ -0.23
LINC01562-201ENST00000366181 MYH13Q9UKX3 1938 aa13.61□□□□□ -0.23
LINC01562-201ENST00000366181 G3BP1Q13283 466 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC01562-201ENST00000366181 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
LINC01562-201ENST00000366181 CHD1LQ86WJ1 897 aa13.61□□□□□ -0.23
LINC01562-201ENST00000366181 EYA2O00167 538 aa13.61□□□□□ -0.23
LINC01562-201ENST00000366181 TAF5LO75529 589 aa13.61□□□□□ -0.23
LINC01562-201ENST00000366181 RPGRQ92834 1020 aaKnown RBP13.61□□□□□ -0.23
LINC01562-201ENST00000366181 BRIP1Q9BX63 1249 aa13.61□□□□□ -0.23
LINC01562-201ENST00000366181 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
LINC01562-201ENST00000366181 CNNM1Q9NRU3 951 aa13.61□□□□□ -0.23
LINC01562-201ENST00000366181 LRRC37AA6NMS7 1700 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms