RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HELQQ8TDG4 1101 aa8.82□□□□□ -1
RNU4-28P-201ENST00000364739 MDFIQ99750 246 aa8.82□□□□□ -1
RNU4-28P-201ENST00000364739 UBE2OQ9C0C9 1292 aaKnown RBP8.82□□□□□ -1
RNU4-28P-201ENST00000364739 ALAS2P22557 587 aa8.81□□□□□ -1
RNU4-28P-201ENST00000364739 MPSTP25325 297 aa8.81□□□□□ -1
RNU4-28P-201ENST00000364739 ADH7P40394 386 aa8.81□□□□□ -1
RNU4-28P-201ENST00000364739 ZNF211Q13398 564 aaPredicted RBP8.81□□□□□ -1
RNU4-28P-201ENST00000364739 TRIP4Q15650 581 aaPredicted RBP8.81□□□□□ -1
RNU4-28P-201ENST00000364739 C8orf86Q6ZUL3 223 aa8.81□□□□□ -1
RNU4-28P-201ENST00000364739 TNFRSF25Q93038 417 aa8.81□□□□□ -1
RNU4-28P-201ENST00000364739 STARD13Q9Y3M8 1113 aa8.81□□□□□ -1
RNU4-28P-201ENST00000364739 ADARB2-AS1A8MUL3 147 aa8.8□□□□□ -1
RNU4-28P-201ENST00000364739 RARAP10276 462 aa8.8□□□□□ -1
RNU4-28P-201ENST00000364739 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
RNU4-28P-201ENST00000364739 LINC00114Q6XXX2 140 aa8.8□□□□□ -1
RNU4-28P-201ENST00000364739 ZBTB42B2RXF5 422 aa8.79□□□□□ -1
RNU4-28P-201ENST00000364739 K7ELQ4 463 aaPredicted RBP8.79□□□□□ -1
RNU4-28P-201ENST00000364739 SERPINB4P48594 390 aa8.79□□□□□ -1
RNU4-28P-201ENST00000364739 PIK3R5Q8WYR1 880 aa8.79□□□□□ -1
RNU4-28P-201ENST00000364739 DNAJB12Q9NXW2 375 aaKnown RBP8.79□□□□□ -1
RNU4-28P-201ENST00000364739 MKL2Q9ULH7 1088 aa8.79□□□□□ -1
RNU4-28P-201ENST00000364739 HFE2Q6ZVN8 426 aa8.78□□□□□ -1
RNU4-28P-201ENST00000364739 ABTB2Q8N961 1025 aa8.78□□□□□ -1
RNU4-28P-201ENST00000364739 SUV39H2Q9H5I1 410 aa8.78□□□□□ -1
RNU4-28P-201ENST00000364739 UBAP1LF5GYI3 381 aa8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 ALBP02768 609 aa8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 EIF1AXP47813 144 aaKnown RBP8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 DGKGP49619 791 aa8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 DNM1Q05193 864 aaKnown RBP8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 NOM1Q5C9Z4 860 aaKnown RBP8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 DHX32Q7L7V1 743 aaKnown RBP8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 EDEM1Q92611 657 aa8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 SLC6A14Q9UN76 642 aa8.77□□□□□ -1.01
RNU4-28P-201ENST00000364739 KRBA1A5PL33 1030 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 A6NHS1 94 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 M0R082 166 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 MMP20O60882 483 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 EGFRP00533 1210 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 ARID4AP29374 1257 aaPredicted RBP8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 BAG6P46379 1132 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 AAMPQ13685 434 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 ZNF417Q8TAU3 575 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 NUDT8Q8WV74 236 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 ZNF587Q96SQ5 575 aaPredicted RBP8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 NAGPAQ9UK23 515 aa8.76□□□□□ -1.01
RNU4-28P-201ENST00000364739 CPB1P15086 417 aa8.75□□□□□ -1.01
RNU4-28P-201ENST00000364739 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
RNU4-28P-201ENST00000364739 MICALL1Q8N3F8 863 aa8.75□□□□□ -1.01
RNU4-28P-201ENST00000364739 GGNBP2Q9H3C7 697 aa8.75□□□□□ -1.01
RNU4-28P-201ENST00000364739 EFCC1Q9HA90 598 aa8.75□□□□□ -1.01
RNU4-28P-201ENST00000364739 J3QW42 95 aa8.74□□□□□ -1.01
RNU4-28P-201ENST00000364739 MAP3K6O95382 1288 aa8.74□□□□□ -1.01
RNU4-28P-201ENST00000364739 FAM35AQ86V20 835 aa8.74□□□□□ -1.01
RNU4-28P-201ENST00000364739 FAM13BQ9NYF5 915 aa8.74□□□□□ -1.01
RNU4-28P-201ENST00000364739 TLR7Q9NYK1 1049 aaKnown RBP8.74□□□□□ -1.01
RNU4-28P-201ENST00000364739 MTMR7Q9Y216 660 aa8.74□□□□□ -1.01
RNU4-28P-201ENST00000364739 COL8A1P27658 744 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 PLAURQ03405 335 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 C8orf34Q49A92 452 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 B4GALNT3Q6L9W6 998 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 PSAPL1Q6NUJ1 521 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 C20orf204Q6ZNR8 217 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 NLRP13Q86W25 1043 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 TRIM11Q96F44 468 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 NSUN5Q96P11 429 aaKnown RBP8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 C11orf16Q9NQ32 467 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 CCDC87Q9NVE4 849 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 POLIQ9UNA4 740 aa8.73□□□□□ -1.01
RNU4-28P-201ENST00000364739 PIK3R2O00459 728 aa8.72□□□□□ -1.01
RNU4-28P-201ENST00000364739 PDGFAP04085 211 aa8.72□□□□□ -1.01
RNU4-28P-201ENST00000364739 COL9A3Q14050 684 aaPredicted RBP8.72□□□□□ -1.01
RNU4-28P-201ENST00000364739 TXNDC2Q86VQ3 553 aa8.72□□□□□ -1.01
RNU4-28P-201ENST00000364739 TRPM4Q8TD43 1214 aa8.72□□□□□ -1.01
RNU4-28P-201ENST00000364739 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
RNU4-28P-201ENST00000364739 H3BRB1 525 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 GNB5O14775 395 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 ICMTO60725 284 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 FAM13AO94988 1023 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 CYP2E1P05181 493 aaPredicted RBP8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 NPR3P17342 541 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 PDE4CQ08493 712 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 SF3B2Q13435 895 aaKnown RBP8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 ECM1Q16610 540 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 PERM1Q5SV97 790 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 PLVAPQ9BX97 442 aa8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 TUT1Q9H6E5 874 aaKnown RBP8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 JPH1Q9HDC5 661 aaPredicted RBP8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 FNDC3AQ9Y2H6 1198 aaKnown RBP8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.71□□□□□ -1.02
RNU4-28P-201ENST00000364739 FZD6O60353 706 aa8.7□□□□□ -1.02
RNU4-28P-201ENST00000364739 PSAPP07602 524 aa8.7□□□□□ -1.02
RNU4-28P-201ENST00000364739 COL13A1Q5TAT6 717 aaPredicted RBP8.7□□□□□ -1.02
RNU4-28P-201ENST00000364739 ELP3Q9H9T3 547 aa8.7□□□□□ -1.02
RNU4-28P-201ENST00000364739 LOC102724428A0A0B4J2F2 783 aa8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 LILRB5O75023 590 aa8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 MZF1P28698 734 aaPredicted RBP8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 SIK1P57059 783 aa8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 GPLD1P80108 840 aa8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 TTC39BQ5VTQ0 682 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms