RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 NTSR2O95665 410 aa25.73■■□□□ 1.71
SHISA4-201ENST00000362011 KAZALD1Q96I82 304 aa25.73■■□□□ 1.71
SHISA4-201ENST00000362011 PARP3Q9Y6F1 533 aa25.73■■□□□ 1.71
SHISA4-201ENST00000362011 NRXN2Q9P2S2 1712 aa25.73■■□□□ 1.71
SHISA4-201ENST00000362011 FAM177BA6PVY3 158 aa25.72■■□□□ 1.71
SHISA4-201ENST00000362011 NYXQ9GZU5 481 aa25.72■■□□□ 1.71
SHISA4-201ENST00000362011 CARMIL3Q8ND23 1372 aa25.72■■□□□ 1.71
SHISA4-201ENST00000362011 SH3TC1Q8TE82 1336 aa25.71■■□□□ 1.71
SHISA4-201ENST00000362011 TOMM70O94826 608 aa25.71■■□□□ 1.71
SHISA4-201ENST00000362011 MTX1Q13505 466 aa25.71■■□□□ 1.71
SHISA4-201ENST00000362011 SPEF2Q9C093 1822 aa25.71■■□□□ 1.71
SHISA4-201ENST00000362011 NFIXQ14938 502 aa25.7■■□□□ 1.71
SHISA4-201ENST00000362011 EPHA10Q5JZY3 1008 aa25.7■■□□□ 1.71
SHISA4-201ENST00000362011 ARHGAP27Q6ZUM4 889 aa25.7■■□□□ 1.71
SHISA4-201ENST00000362011 PLA2G12BQ9BX93 195 aa25.7■■□□□ 1.71
SHISA4-201ENST00000362011 ARFGEF1Q9Y6D6 1849 aa25.7■■□□□ 1.7
SHISA4-201ENST00000362011 PNMA6EA0A0J9YXQ4 647 aa25.69■■□□□ 1.7
SHISA4-201ENST00000362011 IRS4O14654 1257 aaPredicted RBP25.69■■□□□ 1.7
SHISA4-201ENST00000362011 RABL6Q3YEC7 729 aaPredicted RBP25.69■■□□□ 1.7
SHISA4-201ENST00000362011 HSP90B1P14625 803 aaKnown RBP25.68■■□□□ 1.7
SHISA4-201ENST00000362011 APLP1P51693 650 aa25.68■■□□□ 1.7
SHISA4-201ENST00000362011 FOXO4P98177 505 aa25.68■■□□□ 1.7
SHISA4-201ENST00000362011 SYNE4Q8N205 404 aa25.68■■□□□ 1.7
SHISA4-201ENST00000362011 SSH3Q8TE77 659 aa25.68■■□□□ 1.7
SHISA4-201ENST00000362011 SRGAP3O43295 1099 aa25.67■■□□□ 1.7
SHISA4-201ENST00000362011 PDE8AO60658 829 aa25.67■■□□□ 1.7
SHISA4-201ENST00000362011 DDR1Q08345 913 aa25.67■■□□□ 1.7
SHISA4-201ENST00000362011 POLA2Q14181 598 aa25.67■■□□□ 1.7
SHISA4-201ENST00000362011 NBPF5PQ86XG9 351 aaPredicted RBP25.67■■□□□ 1.7
SHISA4-201ENST00000362011 TM4SF1P30408 202 aa25.66■■□□□ 1.7
SHISA4-201ENST00000362011 DNAJC5GQ8N7S2 189 aa25.66■■□□□ 1.7
SHISA4-201ENST00000362011 PIM2Q9P1W9 311 aa25.66■■□□□ 1.7
SHISA4-201ENST00000362011 TNRC6CQ9HCJ0 1690 aaKnown RBP25.66■■□□□ 1.7
SHISA4-201ENST00000362011 ANKRD31Q8N7Z5 1873 aa25.66■■□□□ 1.7
SHISA4-201ENST00000362011 GTF2E1P29083 439 aaPredicted RBP25.65■■□□□ 1.7
SHISA4-201ENST00000362011 LMBR1LQ6UX01 489 aa25.65■■□□□ 1.7
SHISA4-201ENST00000362011 TPTE2Q6XPS3 522 aa25.65■■□□□ 1.7
SHISA4-201ENST00000362011 NUTM1Q86Y26 1132 aa25.65■■□□□ 1.7
SHISA4-201ENST00000362011 GCC1Q96CN9 775 aa25.65■■□□□ 1.7
SHISA4-201ENST00000362011 NMRK2Q9NPI5 230 aa25.65■■□□□ 1.7
SHISA4-201ENST00000362011 ERFEQ4G0M1 354 aa25.64■■□□□ 1.7
SHISA4-201ENST00000362011 CTSWP56202 376 aa25.63■■□□□ 1.69
SHISA4-201ENST00000362011 C9orf131Q5VYM1 1079 aa25.63■■□□□ 1.69
SHISA4-201ENST00000362011 SMC5Q8IY18 1101 aa25.63■■□□□ 1.69
SHISA4-201ENST00000362011 DCTPP1Q9H773 170 aa25.63■■□□□ 1.69
SHISA4-201ENST00000362011 TAF1P21675 1872 aa25.63■■□□□ 1.69
SHISA4-201ENST00000362011 NPHP1O15259 732 aa25.63■■□□□ 1.69
SHISA4-201ENST00000362011 CHMP3Q9Y3E7 222 aa25.63■■□□□ 1.69
SHISA4-201ENST00000362011 ABCC12Q96J65 1359 aa25.62■■□□□ 1.69
SHISA4-201ENST00000362011 POLRMTO00411 1230 aaKnown RBP25.62■■□□□ 1.69
SHISA4-201ENST00000362011 SERPINB2P05120 415 aa25.62■■□□□ 1.69
SHISA4-201ENST00000362011 CSF1RP07333 972 aa25.62■■□□□ 1.69
SHISA4-201ENST00000362011 HCLS1P14317 486 aaPredicted RBP25.62■■□□□ 1.69
SHISA4-201ENST00000362011 DALRD3Q5D0E6 543 aaKnown RBP25.61■■□□□ 1.69
SHISA4-201ENST00000362011 SLC10A5Q5PT55 438 aa25.61■■□□□ 1.69
SHISA4-201ENST00000362011 CNBD1Q8NA66 436 aa25.61■■□□□ 1.69
SHISA4-201ENST00000362011 RBM46Q8TBY0 533 aaKnown RBP25.61■■□□□ 1.69
SHISA4-201ENST00000362011 RIC1Q4ADV7 1423 aa25.61■■□□□ 1.69
SHISA4-201ENST00000362011 TTLL11Q8NHH1 800 aa25.6■■□□□ 1.69
SHISA4-201ENST00000362011 RFX5P48382 616 aaPredicted RBP25.58■■□□□ 1.69
SHISA4-201ENST00000362011 ST5P78524 1137 aa25.58■■□□□ 1.69
SHISA4-201ENST00000362011 PRR5LQ6MZQ0 368 aa25.58■■□□□ 1.69
SHISA4-201ENST00000362011 A0A1B0GUL6 1792 aa25.57■■□□□ 1.68
SHISA4-201ENST00000362011 SURF6O75683 361 aaKnown RBP25.57■■□□□ 1.68
SHISA4-201ENST00000362011 CHRNA5P30532 468 aa25.57■■□□□ 1.68
SHISA4-201ENST00000362011 CCDC57Q2TAC2 916 aa25.57■■□□□ 1.68
SHISA4-201ENST00000362011 FAM161AQ3B820 660 aa25.57■■□□□ 1.68
SHISA4-201ENST00000362011 HSP90AB4PQ58FF6 505 aa25.57■■□□□ 1.68
SHISA4-201ENST00000362011 EXOC6BQ9Y2D4 811 aa25.57■■□□□ 1.68
SHISA4-201ENST00000362011 CACNA1SQ13698 1873 aa25.56■■□□□ 1.68
SHISA4-201ENST00000362011 CCDC152Q4G0S7 254 aa25.56■■□□□ 1.68
SHISA4-201ENST00000362011 CCDC85AQ96PX6 553 aaPredicted RBP25.56■■□□□ 1.68
SHISA4-201ENST00000362011 PDZRN3Q9UPQ7 1066 aa25.56■■□□□ 1.68
SHISA4-201ENST00000362011 PA2G4Q9UQ80 394 aaKnown RBP25.56■■□□□ 1.68
SHISA4-201ENST00000362011 NOP58Q9Y2X3 529 aaKnown RBP25.56■■□□□ 1.68
SHISA4-201ENST00000362011 RTL9Q8NET4 1388 aa25.55■■□□□ 1.68
SHISA4-201ENST00000362011 PTPN12Q05209 780 aaKnown RBP25.55■■□□□ 1.68
SHISA4-201ENST00000362011 IFIT5Q13325 482 aaKnown RBP25.55■■□□□ 1.68
SHISA4-201ENST00000362011 NLRP3Q96P20 1036 aa25.55■■□□□ 1.68
SHISA4-201ENST00000362011 GREM2Q9H772 168 aa25.55■■□□□ 1.68
SHISA4-201ENST00000362011 COPRSQ9NQ92 184 aa25.55■■□□□ 1.68
SHISA4-201ENST00000362011 WDR90Q96KV7 1748 aa25.54■■□□□ 1.68
SHISA4-201ENST00000362011 SBF1O95248 1867 aa25.54■■□□□ 1.68
SHISA4-201ENST00000362011 ANKRD18BA2A2Z9 1011 aa25.54■■□□□ 1.68
SHISA4-201ENST00000362011 RAB11FIP3O75154 756 aa25.54■■□□□ 1.68
SHISA4-201ENST00000362011 FSTL1Q12841 308 aa25.54■■□□□ 1.68
SHISA4-201ENST00000362011 SF3B3Q15393 1217 aaKnown RBP25.54■■□□□ 1.68
SHISA4-201ENST00000362011 CCDC24Q8N4L8 307 aa25.54■■□□□ 1.68
SHISA4-201ENST00000362011 ZBTB47Q9UFB7 747 aaPredicted RBP25.54■■□□□ 1.68
SHISA4-201ENST00000362011 ITGA6P23229 1130 aa25.53■■□□□ 1.68
SHISA4-201ENST00000362011 OS9Q13438 667 aaPredicted RBP25.53■■□□□ 1.68
SHISA4-201ENST00000362011 ANKRD45Q5TZF3 282 aa25.53■■□□□ 1.68
SHISA4-201ENST00000362011 RNF181Q9P0P0 153 aa25.53■■□□□ 1.68
SHISA4-201ENST00000362011 COL11A2P13942 1736 aaPredicted RBP25.53■■□□□ 1.68
SHISA4-201ENST00000362011 NUCB1Q02818 461 aa25.52■■□□□ 1.68
SHISA4-201ENST00000362011 G3BP1Q13283 466 aaKnown RBP eCLIP25.52■■□□□ 1.68
SHISA4-201ENST00000362011 TAF7LQ5H9L4 462 aa25.52■■□□□ 1.68
SHISA4-201ENST00000362011 KLHDC4Q8TBB5 520 aa25.52■■□□□ 1.68
SHISA4-201ENST00000362011 ZC3H4Q9UPT8 1303 aaKnown RBP25.51■■□□□ 1.67
SHISA4-201ENST00000362011 APBB1O00213 710 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms