RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 UBAP2LQ14157 1087 aaKnown RBP7.79□□□□□ -1.16
RPL39-201ENST00000361575 ZNF394Q53GI3 561 aa7.79□□□□□ -1.16
RPL39-201ENST00000361575 GALNT12Q8IXK2 581 aa7.79□□□□□ -1.16
RPL39-201ENST00000361575 NEUROD4Q9HD90 331 aa7.79□□□□□ -1.16
RPL39-201ENST00000361575 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
RPL39-201ENST00000361575 F11P03951 625 aa7.78□□□□□ -1.16
RPL39-201ENST00000361575 CYP2E1P05181 493 aaPredicted RBP7.78□□□□□ -1.16
RPL39-201ENST00000361575 SMCPP49901 116 aaPredicted RBP7.78□□□□□ -1.16
RPL39-201ENST00000361575 PTPN12Q05209 780 aaKnown RBP7.78□□□□□ -1.16
RPL39-201ENST00000361575 SCARF1Q14162 830 aa7.78□□□□□ -1.16
RPL39-201ENST00000361575 NXPE4Q6UWF7 544 aa7.78□□□□□ -1.16
RPL39-201ENST00000361575 NLRP8Q86W28 1048 aa7.78□□□□□ -1.16
RPL39-201ENST00000361575 ABI2Q9NYB9 513 aaPredicted RBP7.78□□□□□ -1.16
RPL39-201ENST00000361575 USP31Q70CQ4 1352 aa7.78□□□□□ -1.16
RPL39-201ENST00000361575 EFSO43281 561 aa7.77□□□□□ -1.17
RPL39-201ENST00000361575 KCNQ4P56696 695 aa7.77□□□□□ -1.17
RPL39-201ENST00000361575 GRIN2CQ14957 1233 aa7.77□□□□□ -1.17
RPL39-201ENST00000361575 NLRP13Q86W25 1043 aa7.77□□□□□ -1.17
RPL39-201ENST00000361575 GLIS3Q8NEA6 775 aa7.77□□□□□ -1.17
RPL39-201ENST00000361575 BCO2Q9BYV7 579 aa7.77□□□□□ -1.17
RPL39-201ENST00000361575 SRA1Q9HD15 236 aaKnown RBP7.77□□□□□ -1.17
RPL39-201ENST00000361575 LATS2Q9NRM7 1088 aa7.77□□□□□ -1.17
RPL39-201ENST00000361575 DDX41Q9UJV9 622 aaKnown RBP7.77□□□□□ -1.17
RPL39-201ENST00000361575 PCDHGB7Q9Y5F8 929 aa7.77□□□□□ -1.17
RPL39-201ENST00000361575 GIPC1O14908 333 aa7.76□□□□□ -1.17
RPL39-201ENST00000361575 USP17L7P0C7H9 530 aa7.76□□□□□ -1.17
RPL39-201ENST00000361575 EPB42P16452 691 aa7.76□□□□□ -1.17
RPL39-201ENST00000361575 SFSWAPQ12872 951 aaKnown RBP7.76□□□□□ -1.17
RPL39-201ENST00000361575 GRM2Q14416 872 aa7.76□□□□□ -1.17
RPL39-201ENST00000361575 PEAR1Q5VY43 1037 aaPredicted RBP7.76□□□□□ -1.17
RPL39-201ENST00000361575 GAS2L1Q99501 681 aaPredicted RBP7.76□□□□□ -1.17
RPL39-201ENST00000361575 C11orf16Q9NQ32 467 aa7.76□□□□□ -1.17
RPL39-201ENST00000361575 NLRP2Q9NX02 1062 aa7.76□□□□□ -1.17
RPL39-201ENST00000361575 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.76□□□□□ -1.17
RPL39-201ENST00000361575 POTECB2RU33 542 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 SASH3O75995 380 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 SLC43A3Q8NBI5 491 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 GSX2Q9BZM3 304 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 SUV39H2Q9H5I1 410 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 CCSER2Q9H7U1 834 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 STRN4Q9NRL3 753 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 ZFATQ9P243 1243 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 FAM8A1Q9UBU6 413 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 GJA3Q9Y6H8 435 aa7.75□□□□□ -1.17
RPL39-201ENST00000361575 SOBPA7XYQ1 873 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 FAM157BP0CG42 384 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 SF3A1Q15459 793 aaKnown RBP7.74□□□□□ -1.17
RPL39-201ENST00000361575 CTC1Q2NKJ3 1217 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 CRIPAKQ8N1N5 446 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 C3orf58Q8NDZ4 430 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 UBXN4Q92575 508 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 CAPN10Q9HC96 672 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 KANSL3Q9P2N6 904 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 KCNH4Q9UQ05 1017 aa7.74□□□□□ -1.17
RPL39-201ENST00000361575 A0A1W2PP55 124 aa7.73□□□□□ -1.17
RPL39-201ENST00000361575 MMP20O60882 483 aa7.73□□□□□ -1.17
RPL39-201ENST00000361575 TARSP26639 723 aaKnown RBP7.73□□□□□ -1.17
RPL39-201ENST00000361575 ST13P50502 369 aaKnown RBP7.73□□□□□ -1.17
RPL39-201ENST00000361575 TAF1CQ15572 869 aaPredicted RBP7.73□□□□□ -1.17
RPL39-201ENST00000361575 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.73□□□□□ -1.17
RPL39-201ENST00000361575 KIAA0319Q5VV43 1072 aa7.73□□□□□ -1.17
RPL39-201ENST00000361575 ERMP1Q7Z2K6 904 aa7.73□□□□□ -1.17
RPL39-201ENST00000361575 PGBD3Q8N328 593 aa7.73□□□□□ -1.17
RPL39-201ENST00000361575 CUEDC1Q9NWM3 386 aaPredicted RBP7.73□□□□□ -1.17
RPL39-201ENST00000361575 GADD45BO75293 160 aaPredicted RBP7.72□□□□□ -1.17
RPL39-201ENST00000361575 CES1P23141 567 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 MAP3K10Q02779 954 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 TNP2Q05952 138 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 COL13A1Q5TAT6 717 aaPredicted RBP7.72□□□□□ -1.17
RPL39-201ENST00000361575 KRT25Q7Z3Z0 450 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 USP48Q86UV5 1035 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 OR13H1Q8NG92 308 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 SRCIN1Q9C0H9 1055 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 COPRSQ9NQ92 184 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 NDFIP2Q9NV92 336 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 PPP1R1BQ9UD71 204 aaPredicted RBP7.72□□□□□ -1.17
RPL39-201ENST00000361575 SALL4Q9UJQ4 1053 aa7.72□□□□□ -1.17
RPL39-201ENST00000361575 DCDC2BA2VCK2 349 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 ATXN7O15265 892 aaPredicted RBP7.71□□□□□ -1.18
RPL39-201ENST00000361575 CCINQ13939 588 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.18
RPL39-201ENST00000361575 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 HS2ST1Q7LGA3 356 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 CNTNAP3BQ96NU0 1288 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 GMLQ99445 158 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 CNTNAP3Q9BZ76 1288 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 DACH1Q9UI36 760 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 GGT7Q9UJ14 662 aa7.71□□□□□ -1.18
RPL39-201ENST00000361575 SLC35F4A4IF30 521 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 AXIN1O15169 862 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 ST8SIA5O15466 376 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 DGAT1O75907 488 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 RGS20O76081 388 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 ACPPP15309 386 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 PTSQ03393 145 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 TTC39BQ5VTQ0 682 aaPredicted RBP7.7□□□□□ -1.18
RPL39-201ENST00000361575 ZNF654Q8IZM8 581 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 PMEPA1Q969W9 287 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 TANGO6Q9C0B7 1094 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 ABCB6Q9NP58 842 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms