RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CTAGE9A4FU28 777 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 HSF2BPO75031 334 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 CCDC175P0C221 793 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 TRMT2AQ8IZ69 625 aaKnown RBP16.04■□□□□ 0.16
SMC5-201ENST00000361138 CLSTN2Q9H4D0 955 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 KIAA0556O60303 1618 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 BRD1O95696 1058 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 CTAGE1Q96RT6 745 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 PI4KAP2A4QPH2 592 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 GOLIM4O00461 696 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 TUBB4BP68371 445 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 PI4KAP1Q8N8J0 262 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 LRRC2Q9BYS8 371 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 ASXL2Q76L83 1435 aa16.04■□□□□ 0.16
SMC5-201ENST00000361138 BCCIPQ9P287 314 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMC5-201ENST00000361138 MICALL1Q8N3F8 863 aa16.03■□□□□ 0.16
SMC5-201ENST00000361138 USHBP1Q8N6Y0 703 aa16.03■□□□□ 0.16
SMC5-201ENST00000361138 JADE2Q9NQC1 790 aa16.03■□□□□ 0.16
SMC5-201ENST00000361138 INCENPQ9NQS7 918 aa16.03■□□□□ 0.16
SMC5-201ENST00000361138 SOGA3Q5TF21 947 aa16.03■□□□□ 0.16
SMC5-201ENST00000361138 LMOD1P29536 600 aaPredicted RBP16.03■□□□□ 0.16
SMC5-201ENST00000361138 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
SMC5-201ENST00000361138 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
SMC5-201ENST00000361138 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
SMC5-201ENST00000361138 METAP2P50579 478 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMC5-201ENST00000361138 CCDC178Q5BJE1 867 aa16.03■□□□□ 0.16
SMC5-201ENST00000361138 UTP14CQ5TAP6 766 aaKnown RBP16.03■□□□□ 0.16
SMC5-201ENST00000361138 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.16
SMC5-201ENST00000361138 HDXQ7Z353 690 aa16.02■□□□□ 0.16
SMC5-201ENST00000361138 NAA15Q9BXJ9 866 aaKnown RBP16.02■□□□□ 0.16
SMC5-201ENST00000361138 ZHX3Q9H4I2 956 aa16.02■□□□□ 0.16
SMC5-201ENST00000361138 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.15
SMC5-201ENST00000361138 EVCP57679 992 aa16.02■□□□□ 0.15
SMC5-201ENST00000361138 SEPT7Q16181 437 aaKnown RBP16.02■□□□□ 0.15
SMC5-201ENST00000361138 CACNA2D4Q7Z3S7 1137 aa16.02■□□□□ 0.15
SMC5-201ENST00000361138 NCOA7Q8NI08 942 aa16.02■□□□□ 0.15
SMC5-201ENST00000361138 SNX14Q9Y5W7 946 aa16.02■□□□□ 0.15
SMC5-201ENST00000361138 IFFO1Q0D2I5 559 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 PPP2R3AQ06190 1150 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 HSP90AA4PQ58FG1 418 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 ATP10BO94823 1461 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 RAB11FIP4Q86YS3 637 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 KDM5AP29375 1690 aaKnown RBP16.01■□□□□ 0.15
SMC5-201ENST00000361138 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 DENND4BO75064 1496 aaPredicted RBP16.01■□□□□ 0.15
SMC5-201ENST00000361138 A0A1B0GUL7 405 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 UTP14AQ9BVJ6 771 aaKnown RBP16.01■□□□□ 0.15
SMC5-201ENST00000361138 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
SMC5-201ENST00000361138 POLKQ9UBT6 870 aa16.01■□□□□ 0.15
SMC5-201ENST00000361138 SPTLC2O15270 562 aa16■□□□□ 0.15
SMC5-201ENST00000361138 CCDC144CPQ8IYA2 1237 aa16■□□□□ 0.15
SMC5-201ENST00000361138 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
SMC5-201ENST00000361138 IBTKQ9P2D0 1353 aaPredicted RBP16■□□□□ 0.15
SMC5-201ENST00000361138 KDM6BO15054 1643 aa16■□□□□ 0.15
SMC5-201ENST00000361138 METTL24Q5JXM2 366 aa16■□□□□ 0.15
SMC5-201ENST00000361138 DYDC1Q8WWB3 177 aa16■□□□□ 0.15
SMC5-201ENST00000361138 NAPBQ9H115 298 aa16■□□□□ 0.15
SMC5-201ENST00000361138 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
SMC5-201ENST00000361138 NF2P35240 595 aa16■□□□□ 0.15
SMC5-201ENST00000361138 KARSQ15046 597 aaKnown RBP16■□□□□ 0.15
SMC5-201ENST00000361138 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
SMC5-201ENST00000361138 MAATS1Q7Z4T9 603 aa16■□□□□ 0.15
SMC5-201ENST00000361138 SEPT11Q9NVA2 429 aaKnown RBP16■□□□□ 0.15
SMC5-201ENST00000361138 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
SMC5-201ENST00000361138 CPA1P15085 419 aa16■□□□□ 0.15
SMC5-201ENST00000361138 GSPT1P15170 499 aaKnown RBP16■□□□□ 0.15
SMC5-201ENST00000361138 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
SMC5-201ENST00000361138 TSG101Q99816 390 aa16■□□□□ 0.15
SMC5-201ENST00000361138 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
SMC5-201ENST00000361138 KLF18A0A0U1RQI7 1052 aa16■□□□□ 0.15
SMC5-201ENST00000361138 N4BP3O15049 544 aa16■□□□□ 0.15
SMC5-201ENST00000361138 PHACTR3Q96KR7 559 aa16■□□□□ 0.15
SMC5-201ENST00000361138 SOS1Q07889 1333 aaPredicted RBP15.99■□□□□ 0.15
SMC5-201ENST00000361138 NEFHP12036 1026 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 HAND2P61296 217 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 PKP1Q13835 747 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 A0A1W2PP64 1363 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 AOX1Q06278 1338 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 DNA2P51530 1060 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 ANKLE2Q86XL3 938 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 OPA1O60313 960 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 MARCKSP29966 332 aaPredicted RBP15.99■□□□□ 0.15
SMC5-201ENST00000361138 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 CCDC82Q8N4S0 544 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 PYM1Q9BRP8 204 aaKnown RBP15.99■□□□□ 0.15
SMC5-201ENST00000361138 FAM160A1Q05DH4 1040 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 CCDC85AQ96PX6 553 aaPredicted RBP15.99■□□□□ 0.15
SMC5-201ENST00000361138 IMPACTQ9P2X3 320 aa15.99■□□□□ 0.15
SMC5-201ENST00000361138 FGFR1OPO95684 399 aaKnown RBP15.98■□□□□ 0.15
SMC5-201ENST00000361138 MATR3P43243 847 aaKnown RBP eCLIP15.98■□□□□ 0.15
SMC5-201ENST00000361138 MPHOSPH8Q99549 860 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 GOPCQ9HD26 462 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 LRP2BPQ9P2M1 347 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 RAD50Q92878 1312 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 PLCD3Q8N3E9 789 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 SLC26A6Q9BXS9 759 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 CCDC113Q9H0I3 377 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms