RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 ARHGAP29Q52LW3 1261 aa23.72■■□□□ 1.39
NCKAP1-201ENST00000360982 WTAPQ15007 396 aa23.72■■□□□ 1.39
NCKAP1-201ENST00000360982 TTC22Q5TAA0 569 aa23.72■■□□□ 1.39
NCKAP1-201ENST00000360982 PRIMPOLQ96LW4 560 aa23.72■■□□□ 1.39
NCKAP1-201ENST00000360982 ANKRD2Q9GZV1 360 aa23.72■■□□□ 1.39
NCKAP1-201ENST00000360982 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
NCKAP1-201ENST00000360982 MYCNP04198 464 aaPredicted RBP23.72■■□□□ 1.39
NCKAP1-201ENST00000360982 ANKRD44Q8N8A2 993 aa23.72■■□□□ 1.39
NCKAP1-201ENST00000360982 ATP8B2P98198 1209 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 TSPY3P0CV98 308 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 TSPY8P0CW00 308 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 KIAA1328Q86T90 577 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 NSFL1CQ9UNZ2 370 aaKnown RBP23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 HDAC1Q13547 482 aaPredicted RBP23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 SKIDA1Q1XH10 827 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 JAKMIP3Q5VZ66 844 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 ABCC1P33527 1531 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 ATP10AO60312 1499 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 LRRC27Q9C0I9 530 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 ZRANB1Q9UGI0 708 aa23.71■■□□□ 1.39
NCKAP1-201ENST00000360982 KLHL10Q6JEL2 608 aa23.7■■□□□ 1.39
NCKAP1-201ENST00000360982 HOXC9P31274 260 aa23.7■■□□□ 1.38
NCKAP1-201ENST00000360982 TBC1D32Q96NH3 1257 aa23.7■■□□□ 1.38
NCKAP1-201ENST00000360982 YTHDC2Q9H6S0 1430 aaKnown RBP23.7■■□□□ 1.38
NCKAP1-201ENST00000360982 CACNA2D4Q7Z3S7 1137 aa23.7■■□□□ 1.38
NCKAP1-201ENST00000360982 CNNM3Q8NE01 707 aa23.7■■□□□ 1.38
NCKAP1-201ENST00000360982 SHANK2Q9UPX8 1470 aa23.7■■□□□ 1.38
NCKAP1-201ENST00000360982 MAP3K19Q56UN5 1328 aa23.7■■□□□ 1.38
NCKAP1-201ENST00000360982 ZRSR2Q15696 482 aaKnown RBP23.7■■□□□ 1.38
NCKAP1-201ENST00000360982 IRS4O14654 1257 aaPredicted RBP23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 C8orf58Q8NAV2 365 aa23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 ERLIN1O75477 346 aa23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 SSR1P43307 286 aaKnown RBP23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 SEPT7Q16181 437 aaKnown RBP23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 TBC1D9Q6ZT07 1266 aa23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 SLC4A4Q9Y6R1 1079 aa23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 SPA17Q15506 151 aa23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 TRAPPC3LQ5T215 181 aa23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 TMEM87AQ8NBN3 555 aa23.69■■□□□ 1.38
NCKAP1-201ENST00000360982 CCDC148Q8NFR7 591 aa23.68■■□□□ 1.38
NCKAP1-201ENST00000360982 BMP15O95972 392 aa23.68■■□□□ 1.38
NCKAP1-201ENST00000360982 KLHL40Q2TBA0 621 aa23.68■■□□□ 1.38
NCKAP1-201ENST00000360982 CLEC11AQ9Y240 323 aa23.68■■□□□ 1.38
NCKAP1-201ENST00000360982 AXDND1Q5T1B0 1012 aaPredicted RBP23.68■■□□□ 1.38
NCKAP1-201ENST00000360982 SLC9C2Q5TAH2 1124 aa23.68■■□□□ 1.38
NCKAP1-201ENST00000360982 IQSEC3Q9UPP2 1182 aaPredicted RBP23.68■■□□□ 1.38
NCKAP1-201ENST00000360982 B4DLN1 442 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 IDEP14735 1019 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 MRPL12P52815 198 aaKnown RBP23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 STK32BQ9NY57 414 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 GNAT2P19087 354 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 DDX19AQ9NUU7 478 aaKnown RBP23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 CCDC183Q5T5S1 534 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 SAMM50Q9Y512 469 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 RNMTO43148 476 aaKnown RBP23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 SFPQP23246 707 aaKnown RBP eCLIP23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 ERMNQ8TAM6 284 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 UBXN4Q92575 508 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 SLC26A6Q9BXS9 759 aa23.67■■□□□ 1.38
NCKAP1-201ENST00000360982 ZBTB43O43298 467 aa23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 DDX21Q9NR30 783 aaKnown RBP eCLIP23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 F8W031 263 aaPredicted RBP23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 MCMDC2Q4G0Z9 681 aa23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 PARP10Q53GL7 1025 aa23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 KANK3Q6NY19 840 aa23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 MRPL50Q8N5N7 158 aaKnown RBP23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 USP25Q9UHP3 1055 aa23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 USP8P40818 1118 aa23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 RBM27Q9P2N5 1060 aaKnown RBP23.66■■□□□ 1.38
NCKAP1-201ENST00000360982 TMCO3Q6UWJ1 677 aa23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 FAM177A1Q8N128 213 aaPredicted RBP23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 EIF2AK4Q9P2K8 1649 aaKnown RBP23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 GNPATO15228 680 aa23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 CAMK4Q16566 473 aa23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 TIGD1Q96MW7 591 aa23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 GTPBP4Q9BZE4 634 aaKnown RBP23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 BABAM1Q9NWV8 329 aa23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 IFIT1BQ5T764 474 aaKnown RBP23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
NCKAP1-201ENST00000360982 FSIP1Q8NA03 581 aa23.64■■□□□ 1.38
NCKAP1-201ENST00000360982 EIF3JO75822 258 aaKnown RBP23.64■■□□□ 1.38
NCKAP1-201ENST00000360982 PDE1AP54750 535 aa23.64■■□□□ 1.37
NCKAP1-201ENST00000360982 PARD3Q8TEW0 1356 aa23.64■■□□□ 1.37
NCKAP1-201ENST00000360982 KLF18A0A0U1RQI7 1052 aa23.64■■□□□ 1.37
NCKAP1-201ENST00000360982 SMAP1Q8IYB5 467 aaPredicted RBP23.63■■□□□ 1.37
NCKAP1-201ENST00000360982 RBM25P49756 843 aaKnown RBP23.63■■□□□ 1.37
NCKAP1-201ENST00000360982 CCDC144CPQ8IYA2 1237 aa23.63■■□□□ 1.37
NCKAP1-201ENST00000360982 PTPN14Q15678 1187 aa23.63■■□□□ 1.37
NCKAP1-201ENST00000360982 BRF1Q92994 677 aa23.63■■□□□ 1.37
NCKAP1-201ENST00000360982 CCDC94Q9BW85 323 aaPredicted RBP23.63■■□□□ 1.37
NCKAP1-201ENST00000360982 ARHGEF10O15013 1369 aa23.63■■□□□ 1.37
NCKAP1-201ENST00000360982 TCOF1Q13428 1488 aaKnown RBP23.63■■□□□ 1.37
NCKAP1-201ENST00000360982 STX6O43752 255 aa23.62■■□□□ 1.37
NCKAP1-201ENST00000360982 NUCB1Q02818 461 aa23.62■■□□□ 1.37
NCKAP1-201ENST00000360982 C8orf34Q49A92 452 aa23.62■■□□□ 1.37
NCKAP1-201ENST00000360982 CCNL1Q9UK58 526 aaPredicted RBP23.62■■□□□ 1.37
NCKAP1-201ENST00000360982 IGHDP01880 384 aa23.62■■□□□ 1.37
NCKAP1-201ENST00000360982 TESK2Q96S53 571 aa23.62■■□□□ 1.37
NCKAP1-201ENST00000360982 ZSCAN16Q9H4T2 348 aaPredicted RBP23.62■■□□□ 1.37
NCKAP1-201ENST00000360982 A0A1W2PP64 1363 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms