RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
SDCBP2-202ENST00000360779 IFIT5Q13325 482 aaKnown RBP20.53■□□□□ 0.88
SDCBP2-202ENST00000360779 KIF1BPQ96EK5 621 aa20.53■□□□□ 0.88
SDCBP2-202ENST00000360779 ANKRD18BA2A2Z9 1011 aa20.52■□□□□ 0.87
SDCBP2-202ENST00000360779 CNBD1Q8NA66 436 aa20.52■□□□□ 0.87
SDCBP2-202ENST00000360779 NOP58Q9Y2X3 529 aaKnown RBP20.52■□□□□ 0.87
SDCBP2-202ENST00000360779 TUBGCP6Q96RT7 1819 aa20.51■□□□□ 0.87
SDCBP2-202ENST00000360779 CCDC152Q4G0S7 254 aa20.51■□□□□ 0.87
SDCBP2-202ENST00000360779 NLGN1Q8N2Q7 840 aa20.51■□□□□ 0.87
SDCBP2-202ENST00000360779 TTLL11Q8NHH1 800 aa20.51■□□□□ 0.87
SDCBP2-202ENST00000360779 CSF1RP07333 972 aa20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 RFX5P48382 616 aaPredicted RBP20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 MSL1Q68DK7 614 aa20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 CCDC24Q8N4L8 307 aa20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 RHPN1Q8TCX5 695 aa20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 GREM2Q9H772 168 aa20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 COPRSQ9NQ92 184 aa20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 COL24A1Q17RW2 1714 aa20.5■□□□□ 0.87
SDCBP2-202ENST00000360779 SERPINB2P05120 415 aa20.49■□□□□ 0.87
SDCBP2-202ENST00000360779 ITGA6P23229 1130 aa20.49■□□□□ 0.87
SDCBP2-202ENST00000360779 PDE4AP27815 886 aa20.49■□□□□ 0.87
SDCBP2-202ENST00000360779 ST5P78524 1137 aa20.49■□□□□ 0.87
SDCBP2-202ENST00000360779 PTPN12Q05209 780 aaKnown RBP20.49■□□□□ 0.87
SDCBP2-202ENST00000360779 ZNF594Q96JF6 807 aaPredicted RBP20.49■□□□□ 0.87
SDCBP2-202ENST00000360779 NLRP3Q96P20 1036 aa20.48■□□□□ 0.87
SDCBP2-202ENST00000360779 ABCC12Q96J65 1359 aa20.47■□□□□ 0.87
SDCBP2-202ENST00000360779 TM4SF1P30408 202 aa20.47■□□□□ 0.87
SDCBP2-202ENST00000360779 LAMB2P55268 1798 aa20.47■□□□□ 0.87
SDCBP2-202ENST00000360779 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
SDCBP2-202ENST00000360779 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
SDCBP2-202ENST00000360779 PARP3Q9Y6F1 533 aa20.47■□□□□ 0.87
SDCBP2-202ENST00000360779 DDX60Q8IY21 1712 aaKnown RBP20.46■□□□□ 0.87
SDCBP2-202ENST00000360779 CNNM1Q9NRU3 951 aa20.46■□□□□ 0.87
SDCBP2-202ENST00000360779 MYH3P11055 1940 aa20.46■□□□□ 0.87
SDCBP2-202ENST00000360779 EYA2O00167 538 aa20.45■□□□□ 0.86
SDCBP2-202ENST00000360779 SLC10A5Q5PT55 438 aa20.45■□□□□ 0.86
SDCBP2-202ENST00000360779 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.86
SDCBP2-202ENST00000360779 POLRMTO00411 1230 aaKnown RBP20.44■□□□□ 0.86
SDCBP2-202ENST00000360779 MMP10P09238 476 aa20.44■□□□□ 0.86
SDCBP2-202ENST00000360779 IGHMBP2P38935 993 aaKnown RBP20.44■□□□□ 0.86
SDCBP2-202ENST00000360779 IL15P40933 162 aaPredicted RBP20.44■□□□□ 0.86
SDCBP2-202ENST00000360779 DDR1Q08345 913 aa20.44■□□□□ 0.86
SDCBP2-202ENST00000360779 PRR5LQ6MZQ0 368 aa20.44■□□□□ 0.86
SDCBP2-202ENST00000360779 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 LRRC24Q50LG9 513 aa20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 LDHAL6AQ6ZMR3 332 aa20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 CDC5LQ99459 802 aaKnown RBP20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 MPHOSPH8Q99549 860 aa20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 SASH1O94885 1247 aa20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 TFCP2Q12800 502 aa20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 AACSQ86V21 672 aa20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 SEC31BQ9NQW1 1179 aa20.43■□□□□ 0.86
SDCBP2-202ENST00000360779 CIAO1O76071 339 aa20.42■□□□□ 0.86
SDCBP2-202ENST00000360779 SF3B3Q15393 1217 aaKnown RBP20.42■□□□□ 0.86
SDCBP2-202ENST00000360779 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
SDCBP2-202ENST00000360779 OTUD7AQ8TE49 926 aaPredicted RBP20.42■□□□□ 0.86
SDCBP2-202ENST00000360779 GPATCH3Q96I76 525 aa20.42■□□□□ 0.86
SDCBP2-202ENST00000360779 PUS3Q9BZE2 481 aaKnown RBP20.42■□□□□ 0.86
SDCBP2-202ENST00000360779 FBXO3Q9UK99 471 aa20.42■□□□□ 0.86
SDCBP2-202ENST00000360779 QSER1Q2KHR3 1735 aa20.41■□□□□ 0.86
SDCBP2-202ENST00000360779 MX1P20591 662 aa20.41■□□□□ 0.86
SDCBP2-202ENST00000360779 METTL24Q5JXM2 366 aa20.41■□□□□ 0.86
SDCBP2-202ENST00000360779 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
SDCBP2-202ENST00000360779 PLEKHM2Q8IWE5 1019 aa20.41■□□□□ 0.86
SDCBP2-202ENST00000360779 CEP126Q9P2H0 1117 aa20.41■□□□□ 0.86
SDCBP2-202ENST00000360779 RTL9Q8NET4 1388 aa20.4■□□□□ 0.86
SDCBP2-202ENST00000360779 ATG9AQ7Z3C6 839 aa20.4■□□□□ 0.86
SDCBP2-202ENST00000360779 ANKRD18AQ8IVF6 992 aa20.4■□□□□ 0.86
SDCBP2-202ENST00000360779 RPGRQ92834 1020 aaKnown RBP20.4■□□□□ 0.86
SDCBP2-202ENST00000360779 CCDC8Q9H0W5 538 aaPredicted RBP20.39■□□□□ 0.85
SDCBP2-202ENST00000360779 TNNI3KQ59H18 835 aa20.37■□□□□ 0.85
SDCBP2-202ENST00000360779 NEUROD6Q96NK8 337 aa20.37■□□□□ 0.85
SDCBP2-202ENST00000360779 FPGT-TNNI3KV9GXZ4 949 aa20.37■□□□□ 0.85
SDCBP2-202ENST00000360779 PDE1AP54750 535 aa20.37■□□□□ 0.85
SDCBP2-202ENST00000360779 TSHZ3Q63HK5 1081 aa20.37■□□□□ 0.85
SDCBP2-202ENST00000360779 AKAP2Q9Y2D5 859 aa20.37■□□□□ 0.85
SDCBP2-202ENST00000360779 TNRC6CQ9HCJ0 1690 aaKnown RBP20.37■□□□□ 0.85
SDCBP2-202ENST00000360779 SLC16A10Q8TF71 515 aa20.36■□□□□ 0.85
SDCBP2-202ENST00000360779 EAF2Q96CJ1 260 aaPredicted RBP20.36■□□□□ 0.85
SDCBP2-202ENST00000360779 PDGFDQ9GZP0 370 aaPredicted RBP20.36■□□□□ 0.85
SDCBP2-202ENST00000360779 RIC1Q4ADV7 1423 aa20.35■□□□□ 0.85
SDCBP2-202ENST00000360779 MROH5Q6ZUA9 1318 aa20.35■□□□□ 0.85
SDCBP2-202ENST00000360779 TTC22Q5TAA0 569 aa20.35■□□□□ 0.85
SDCBP2-202ENST00000360779 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
SDCBP2-202ENST00000360779 R3HDM1Q15032 1099 aaKnown RBP20.34■□□□□ 0.85
SDCBP2-202ENST00000360779 GORABQ5T7V8 394 aa20.34■□□□□ 0.85
SDCBP2-202ENST00000360779 RIPOR2Q9Y4F9 1068 aa20.34■□□□□ 0.85
SDCBP2-202ENST00000360779 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.34■□□□□ 0.85
SDCBP2-202ENST00000360779 CASZ1Q86V15 1759 aa20.33■□□□□ 0.85
SDCBP2-202ENST00000360779 ERC2O15083 957 aa20.33■□□□□ 0.85
SDCBP2-202ENST00000360779 PDE6BP35913 854 aa20.33■□□□□ 0.85
SDCBP2-202ENST00000360779 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.85
SDCBP2-202ENST00000360779 BRIP1Q9BX63 1249 aa20.33■□□□□ 0.85
SDCBP2-202ENST00000360779 GPR108Q9NPR9 543 aa20.33■□□□□ 0.85
SDCBP2-202ENST00000360779 ECHDC1Q9NTX5 307 aa20.33■□□□□ 0.85
SDCBP2-202ENST00000360779 SPEF2Q9C093 1822 aa20.33■□□□□ 0.84
SDCBP2-202ENST00000360779 RPS8P62241 208 aaKnown RBP20.32■□□□□ 0.84
SDCBP2-202ENST00000360779 BMP2KLQ5H9B9 411 aa20.32■□□□□ 0.84
SDCBP2-202ENST00000360779 HELBQ8NG08 1087 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms