RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 ANKIB1Q9P2G1 1089 aa16.41■□□□□ 0.22
PCMTD1-201ENST00000360540 TTC41PQ6P2S7 1318 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 CBX1P83916 185 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 ZBTB9Q96C00 473 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 TNNT1P13805 278 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 OTUD7BQ6GQQ9 843 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 NCOA7Q8NI08 942 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 GAS2L3Q86XJ1 694 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 CAGE1Q8TC20 777 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 TMEM2Q9UHN6 1383 aa16.4■□□□□ 0.22
PCMTD1-201ENST00000360540 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.22
PCMTD1-201ENST00000360540 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.22
PCMTD1-201ENST00000360540 GPS2Q13227 327 aa16.39■□□□□ 0.21
PCMTD1-201ENST00000360540 RUFY3Q7L099 469 aa16.39■□□□□ 0.21
PCMTD1-201ENST00000360540 NOL7Q9UMY1 257 aaKnown RBP16.39■□□□□ 0.21
PCMTD1-201ENST00000360540 MCM5P33992 734 aa16.39■□□□□ 0.21
PCMTD1-201ENST00000360540 LUZP1Q86V48 1076 aa16.39■□□□□ 0.21
PCMTD1-201ENST00000360540 C17orf53Q8N3J3 647 aaPredicted RBP16.39■□□□□ 0.21
PCMTD1-201ENST00000360540 MIGA1Q8NAN2 632 aa16.39■□□□□ 0.21
PCMTD1-201ENST00000360540 TMC6Q7Z403 805 aa16.39■□□□□ 0.21
PCMTD1-201ENST00000360540 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 TMEM63CQ9P1W3 806 aa16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 PPP1R1BQ9UD71 204 aaPredicted RBP16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 CTDP1Q9Y5B0 961 aaPredicted RBP16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 EPS15P42566 896 aa16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 MAGEC2Q9UBF1 373 aaPredicted RBP16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 KRT18P05783 430 aaKnown RBP16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 PDCL2Q8N4E4 241 aa16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 DCAF5Q96JK2 942 aa16.38■□□□□ 0.21
PCMTD1-201ENST00000360540 PRC1O43663 620 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 DZIP1Q86YF9 867 aaKnown RBP16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 CCDC43Q96MW1 224 aaKnown RBP16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 LMBRD1Q9NUN5 540 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 ZPR1O75312 459 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 PTH1RQ03431 593 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 CCDC70Q6NSX1 233 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 EAF2Q96CJ1 260 aaPredicted RBP16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 SEC62Q99442 399 aaKnown RBP16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 VAT1LQ9HCJ6 419 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 CDC42BPAQ5VT25 1732 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 TRPM2O94759 1503 aa16.37■□□□□ 0.21
PCMTD1-201ENST00000360540 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 IQCA1Q86XH1 822 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 INTS4Q96HW7 963 aaKnown RBP16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 ALG1Q9BT22 464 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 TANGO6Q9C0B7 1094 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 JAK2O60674 1132 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 URI1O94763 535 aaPredicted RBP16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 ERCC4Q92889 916 aaPredicted RBP16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 SLC27A2O14975 620 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 MTERF4Q7Z6M4 381 aaKnown RBP16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 ROBO2Q9HCK4 1378 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 SMTNL1A8MU46 457 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 RRP9O43818 475 aaKnown RBP16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 IL2RBP14784 551 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 TYRO3Q06418 890 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 ZKSCAN5Q9Y2L8 839 aa16.36■□□□□ 0.21
PCMTD1-201ENST00000360540 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 ZNF652Q9Y2D9 606 aa16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 LMOD1P29536 600 aaPredicted RBP16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 TNNI3KQ59H18 835 aa16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 WASF1Q92558 559 aa16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 SMARCE1Q969G3 411 aa16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 FPGT-TNNI3KV9GXZ4 949 aa16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 V9GYY5 206 aaPredicted RBP16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 SPDYE4A6NLX3 237 aa16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 GCKRQ14397 625 aa16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 FAM200AQ8TCP9 573 aa16.35■□□□□ 0.21
PCMTD1-201ENST00000360540 RAD50Q92878 1312 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 ZBTB43O43298 467 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 NOLC1Q14978 699 aaKnown RBP eCLIP16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 RASEFQ8IZ41 740 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 ATP6V1AP38606 617 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 HSP90B2PQ58FF3 399 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 TEX35Q5T0J7 233 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 CYP7A1P22680 504 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 AOPEPQ8N6M6 819 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 STX8Q9UNK0 236 aa16.34■□□□□ 0.21
PCMTD1-201ENST00000360540 IRS4O14654 1257 aaPredicted RBP16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 STX1AQ16623 288 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms