RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ANKRD44Q8N8A2 993 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 PARP3Q9Y6F1 533 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 IFIT5Q13325 482 aaKnown RBP11.59□□□□□ -0.55
SIN3A-201ENST00000360439 METTL24Q5JXM2 366 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 DDX46Q7L014 1031 aaKnown RBP11.59□□□□□ -0.55
SIN3A-201ENST00000360439 NCAPGQ9BPX3 1015 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 CTDP1Q9Y5B0 961 aaPredicted RBP11.59□□□□□ -0.55
SIN3A-201ENST00000360439 ZBTB7BO15156 539 aaPredicted RBP11.59□□□□□ -0.55
SIN3A-201ENST00000360439 PSMA5P28066 241 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 PLEKHF1Q96S99 279 aa11.59□□□□□ -0.55
SIN3A-201ENST00000360439 FSD2A1L4K1 749 aa11.58□□□□□ -0.55
SIN3A-201ENST00000360439 VAMP4O75379 141 aa11.58□□□□□ -0.55
SIN3A-201ENST00000360439 DCTPP1Q9H773 170 aa11.58□□□□□ -0.55
SIN3A-201ENST00000360439 UBE3BQ7Z3V4 1068 aa11.58□□□□□ -0.56
SIN3A-201ENST00000360439 USP19O94966 1318 aa11.58□□□□□ -0.56
SIN3A-201ENST00000360439 ATP7BP35670 1465 aa11.58□□□□□ -0.56
SIN3A-201ENST00000360439 ARGLU1Q9NWB6 273 aaPredicted RBP11.58□□□□□ -0.56
SIN3A-201ENST00000360439 CARD10Q9BWT7 1032 aa11.58□□□□□ -0.56
SIN3A-201ENST00000360439 CWC25Q9NXE8 425 aaPredicted RBP11.58□□□□□ -0.56
SIN3A-201ENST00000360439 OGFRQ9NZT2 677 aa11.58□□□□□ -0.56
SIN3A-201ENST00000360439 SOS1Q07889 1333 aaPredicted RBP11.58□□□□□ -0.56
SIN3A-201ENST00000360439 ICE2Q659A1 982 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 FAM196AQ6ZSG2 479 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 FSD1Q9BTV5 496 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 BIN2Q9UBW5 565 aaPredicted RBP11.57□□□□□ -0.56
SIN3A-201ENST00000360439 USP6P35125 1406 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 NOC3LQ8WTT2 800 aaKnown RBP11.57□□□□□ -0.56
SIN3A-201ENST00000360439 ZSCAN31Q96LW9 406 aaPredicted RBP11.57□□□□□ -0.56
SIN3A-201ENST00000360439 VWDEQ8N2E2 1590 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 NF2P35240 595 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 ZNF790Q6PG37 636 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 PRDM16Q9HAZ2 1276 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 FKBP4Q02790 459 aaKnown RBP eCLIP11.57□□□□□ -0.561e-6■■■■■ 33.9
SIN3A-201ENST00000360439 CEP120Q8N960 986 aa11.57□□□□□ -0.56
SIN3A-201ENST00000360439 MX1P20591 662 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 PDCP20941 246 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 UVSSAQ2YD98 709 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 CCDC112Q8NEF3 446 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 JCADQ9P266 1359 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 SETD1BQ9UPS6 1966 aaKnown RBP11.56□□□□□ -0.56
SIN3A-201ENST00000360439 GABPB1Q06547 395 aaPredicted RBP11.56□□□□□ -0.56
SIN3A-201ENST00000360439 ABCC4O15439 1325 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 DHX16O60231 1041 aaKnown RBP11.56□□□□□ -0.56
SIN3A-201ENST00000360439 KRT24Q2M2I5 525 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 WDR17Q8IZU2 1322 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 TPD52L2O43399 206 aaKnown RBP11.56□□□□□ -0.56
SIN3A-201ENST00000360439 ZSCAN23Q3MJ62 389 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 TPTE2Q6XPS3 522 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 ABCF2Q9UG63 623 aa11.56□□□□□ -0.56
SIN3A-201ENST00000360439 ANKRD18BA2A2Z9 1011 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 TTC36A6NLP5 189 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 SUFUQ9UMX1 484 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 ALKQ9UM73 1620 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 TERF1P54274 439 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 TRDNQ13061 729 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 IL1RAPL2Q9NP60 686 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 SLC52A2Q9HAB3 445 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 MYOM1P52179 1685 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 IBTKQ9P2D0 1353 aaPredicted RBP11.55□□□□□ -0.56
SIN3A-201ENST00000360439 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 LRSAM1Q6UWE0 723 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 C8orf58Q8NAV2 365 aa11.55□□□□□ -0.56
SIN3A-201ENST00000360439 VPS53Q5VIR6 699 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 AACSQ86V21 672 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 DNAJC10Q8IXB1 793 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 PPRC1Q5VV67 1664 aaKnown RBP11.54□□□□□ -0.56
SIN3A-201ENST00000360439 DZIP1Q86YF9 867 aaKnown RBP11.54□□□□□ -0.56
SIN3A-201ENST00000360439 EGFL6Q8IUX8 553 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 RNF217Q8TC41 542 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 MTMR7Q9Y216 660 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 RBM6P78332 1123 aaKnown RBP11.54□□□□□ -0.56
SIN3A-201ENST00000360439 ZRSR2Q15696 482 aaKnown RBP11.54□□□□□ -0.56
SIN3A-201ENST00000360439 CAVIN4Q5BKX8 364 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 GBP6Q6ZN66 633 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 ZSCAN29Q8IWY8 852 aaPredicted RBP11.54□□□□□ -0.56
SIN3A-201ENST00000360439 CDC5LQ99459 802 aaKnown RBP11.54□□□□□ -0.56
SIN3A-201ENST00000360439 FEZ1Q99689 392 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 PTCH1Q13635 1447 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 PLEKHM2Q8IWE5 1019 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 ACRBPQ8NEB7 543 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 RAI14Q9P0K7 980 aa11.54□□□□□ -0.56
SIN3A-201ENST00000360439 EPB41L2O43491 1005 aaKnown RBP11.53□□□□□ -0.56
SIN3A-201ENST00000360439 IFIT1P09914 478 aaKnown RBP11.53□□□□□ -0.56
SIN3A-201ENST00000360439 CCDC183Q5T5S1 534 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 LDHAL6AQ6ZMR3 332 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 KRBA2Q6ZNG9 492 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 MRFAP1L1Q96HT8 127 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 EXOC6BQ9Y2D4 811 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 JRKLQ9Y4A0 524 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 CEP170BQ9Y4F5 1589 aaPredicted RBP11.53□□□□□ -0.56
SIN3A-201ENST00000360439 GOLGA6L19H0YKK7 550 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 ZNF445P59923 1031 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 AATKQ6ZMQ8 1374 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 SYNE3Q6ZMZ3 975 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 SPC24Q8NBT2 197 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 ERBB3P21860 1342 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 A1BGP04217 495 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms