RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SEPT14Q6ZU15 432 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 ZNF444Q8N0Y2 327 aaPredicted RBP15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 CTAGE1Q96RT6 745 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 ANKIB1Q9P2G1 1089 aa15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 SPTY2D1Q68D10 685 aaPredicted RBP15.01□□□□□ -0.01
SRGAP3-201ENST00000360413 IL1RAPL2Q9NP60 686 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 GJB2P29033 226 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 ERCC6LQ2NKX8 1250 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 NCAPGQ9BPX3 1015 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 MYCBPQ99417 103 aaPredicted RBP15□□□□□ -0.01
SRGAP3-201ENST00000360413 TTLL12Q14166 644 aaPredicted RBP15□□□□□ -0.01
SRGAP3-201ENST00000360413 IMPG2Q9BZV3 1241 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 HFM1A2PYH4 1435 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 VCX3BQ9H321 246 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 TFIP11Q9UBB9 837 aaKnown RBP15□□□□□ -0.01
SRGAP3-201ENST00000360413 BAG3O95817 575 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 AFAP1L1Q8TED9 768 aa15□□□□□ -0.01
SRGAP3-201ENST00000360413 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 TMEM57Q8N5G2 664 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 SEC62Q99442 399 aaKnown RBP14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 TXNDC16Q9P2K2 825 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 CIB2O75838 187 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 SYT1P21579 422 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 CYLC1P35663 651 aaPredicted RBP14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 PDE4BQ07343 736 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 TRIM7Q9C029 511 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 HLA-DOAP06340 250 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 RHOXF2BP0C7M4 288 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 RHOXF2Q9BQY4 288 aa14.99□□□□□ -0.01
SRGAP3-201ENST00000360413 HECW1Q76N89 1606 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 ARL1P40616 181 aaPredicted RBP14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 ARFGAP2Q8N6H7 521 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 SLC12A7Q9Y666 1083 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 CASQ2O14958 399 aaPredicted RBP14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 TSNAXIP1Q2TAA8 658 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 N4BP3O15049 544 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 CEP85LQ5SZL2 805 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 CAPZA3Q96KX2 299 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 ANKRD30BQ9BXX2 1392 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 BTBD11A6QL63 1104 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 PRC1O43663 620 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 CCDC63Q8NA47 563 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 INTS8Q75QN2 995 aaKnown RBP14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 NUTM1Q86Y26 1132 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 RABGAP1Q9Y3P9 1069 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 SMIM23A6NLE4 172 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 SLC5A1P13866 664 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 CCDC40Q4G0X9 1142 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 KCNH5Q8NCM2 988 aa14.98□□□□□ -0.01
SRGAP3-201ENST00000360413 AKR1B10O60218 316 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 MX1P20591 662 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 GCKP35557 465 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 SKAP1Q86WV1 359 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 RPGRQ92834 1020 aaKnown RBP14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 KIF1BPQ96EK5 621 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 VCXQ9H320 206 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 LMBR1Q8WVP7 490 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 KRT13P13646 458 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 PUF60Q9UHX1 559 aaKnown RBP14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 GABPB1Q06547 395 aaPredicted RBP14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 MAP7Q14244 749 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 WHAMMP3Q1A5X7 153 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 SH2D4BQ5SQS7 431 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 TTC36A6NLP5 189 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 ERCC3P19447 782 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 SSRP1Q08945 709 aaKnown RBP14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 CACYBPQ9HB71 228 aaKnown RBP14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 MRVI1Q9Y6F6 885 aa14.97□□□□□ -0.01
SRGAP3-201ENST00000360413 TCERG1LQ5VWI1 586 aa14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 FAM200AQ8TCP9 573 aa14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 TUBBP07437 444 aa14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 AP1ARQ63HQ0 302 aa14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 IDH1O75874 414 aaKnown RBP14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 METTL24Q5JXM2 366 aa14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 ZNF530Q6P9A1 599 aaPredicted RBP14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 IFT81Q8WYA0 676 aa14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 TBCAO75347 108 aaKnown RBP14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 DDX54Q8TDD1 881 aaKnown RBP14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 LDHCP07864 332 aa14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 U2AF2P26368 475 aaKnown RBP eCLIP14.96□□□□□ -0.01
SRGAP3-201ENST00000360413 VAV2P52735 878 aa14.96□□□□□ -0.02
SRGAP3-201ENST00000360413 ZGPATQ8N5A5 531 aaKnown RBP14.96□□□□□ -0.02
SRGAP3-201ENST00000360413 KCNK9Q9NPC2 374 aa14.96□□□□□ -0.02
SRGAP3-201ENST00000360413 SYNJ2O15056 1496 aa14.96□□□□□ -0.02
SRGAP3-201ENST00000360413 ERICH3Q5RHP9 1530 aa14.96□□□□□ -0.02
SRGAP3-201ENST00000360413 AFAP1L2Q8N4X5 818 aa14.96□□□□□ -0.02
SRGAP3-201ENST00000360413 ATAD2Q6PL18 1390 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 RPGRIP1LQ68CZ1 1315 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 NDUFAB1O14561 156 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 NEDD9Q14511 834 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 PROSER2Q86WR7 435 aaPredicted RBP14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 GSTO1P78417 241 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 TMCO4Q5TGY1 634 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 LARP6Q9BRS8 491 aaKnown RBP14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 EXOC6BQ9Y2D4 811 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 SH3BP5O60239 455 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 PTGS1P23219 599 aa14.95□□□□□ -0.02
SRGAP3-201ENST00000360413 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms