RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 SEC31BQ9NQW1 1179 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 PDZRN3Q9UPQ7 1066 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 COL11A2P13942 1736 aaPredicted RBP8.09□□□□□ -1.11
SUDS3-201ENST00000360286 UTYO14607 1347 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 SLX4Q8IY92 1834 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 CSF1RP07333 972 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 PRKCSHP14314 528 aaPredicted RBP8.09□□□□□ -1.11
SUDS3-201ENST00000360286 ALDH1B1P30837 517 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 HOXA10P31260 410 aaPredicted RBP8.09□□□□□ -1.11
SUDS3-201ENST00000360286 GPR162Q16538 588 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 DALRD3Q5D0E6 543 aaKnown RBP8.09□□□□□ -1.11
SUDS3-201ENST00000360286 OLFM4Q6UX06 510 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 DDX46Q7L014 1031 aaKnown RBP8.09□□□□□ -1.11
SUDS3-201ENST00000360286 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 MEIS3Q99687 375 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 PLA2G12BQ9BX93 195 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 SUPT16HQ9Y5B9 1047 aaKnown RBP8.09□□□□□ -1.11
SUDS3-201ENST00000360286 RIC1Q4ADV7 1423 aa8.09□□□□□ -1.11
SUDS3-201ENST00000360286 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.12
SUDS3-201ENST00000360286 CACNA1SQ13698 1873 aa8.09□□□□□ -1.12
SUDS3-201ENST00000360286 ZBTB7BO15156 539 aaPredicted RBP8.08□□□□□ -1.12
SUDS3-201ENST00000360286 C21orf2O43822 256 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 HSP90B1P14625 803 aaKnown RBP8.08□□□□□ -1.12
SUDS3-201ENST00000360286 RRP1P56182 461 aaKnown RBP8.08□□□□□ -1.12
SUDS3-201ENST00000360286 CTSWP56202 376 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 CCDC152Q4G0S7 254 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
SUDS3-201ENST00000360286 LMBR1LQ6UX01 489 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 ITPRIPQ8IWB1 547 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.08□□□□□ -1.12
SUDS3-201ENST00000360286 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 CELF1Q92879 486 aaKnown RBP8.08□□□□□ -1.12
SUDS3-201ENST00000360286 CRAMP1Q96RY5 1269 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 BICC1Q9H694 974 aaKnown RBP8.08□□□□□ -1.12
SUDS3-201ENST00000360286 GREM2Q9H772 168 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 GTF3C3Q9Y5Q9 886 aa8.08□□□□□ -1.12
SUDS3-201ENST00000360286 MYH3P11055 1940 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 DLEC1Q9Y238 1755 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 UBTFL1P0CB47 393 aaPredicted RBP8.07□□□□□ -1.12
SUDS3-201ENST00000360286 MS4A1P11836 297 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 GRAPQ13588 217 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 PDE3AQ14432 1141 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 ARHGAP27Q6ZUM4 889 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 ANKRD44Q8N8A2 993 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 GRAPLQ8TC17 118 aaPredicted RBP8.07□□□□□ -1.12
SUDS3-201ENST00000360286 CHMP3Q9Y3E7 222 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 LRRFIP2Q9Y608 721 aaKnown RBP8.07□□□□□ -1.12
SUDS3-201ENST00000360286 COL4A1P02462 1669 aa8.07□□□□□ -1.12
SUDS3-201ENST00000360286 PPEF1O14829 653 aaPredicted RBP8.06□□□□□ -1.12
SUDS3-201ENST00000360286 BBOX1O75936 387 aa8.06□□□□□ -1.12
SUDS3-201ENST00000360286 GNAI3P08754 354 aa8.06□□□□□ -1.12
SUDS3-201ENST00000360286 ITGA6P23229 1130 aa8.06□□□□□ -1.12
SUDS3-201ENST00000360286 RPS8P62241 208 aaKnown RBP8.06□□□□□ -1.12
SUDS3-201ENST00000360286 MVPQ14764 893 aaKnown RBP8.06□□□□□ -1.12
SUDS3-201ENST00000360286 FAM161AQ3B820 660 aa8.06□□□□□ -1.12
SUDS3-201ENST00000360286 RABL6Q3YEC7 729 aaPredicted RBP8.06□□□□□ -1.12
SUDS3-201ENST00000360286 ZNF594Q96JF6 807 aaPredicted RBP8.06□□□□□ -1.12
SUDS3-201ENST00000360286 C1orf115Q9H7X2 142 aa8.06□□□□□ -1.12
SUDS3-201ENST00000360286 GOLGB1Q14789 3259 aaKnown RBP8.05□□□□□ -1.12
SUDS3-201ENST00000360286 ANKRD18BA2A2Z9 1011 aa8.05□□□□□ -1.12
SUDS3-201ENST00000360286 DCAF8L1A6NGE4 600 aa8.05□□□□□ -1.12
SUDS3-201ENST00000360286 GRIN3BO60391 1043 aa8.05□□□□□ -1.12
SUDS3-201ENST00000360286 GNAI2P04899 355 aa8.05□□□□□ -1.12
SUDS3-201ENST00000360286 IFIT5Q13325 482 aaKnown RBP8.05□□□□□ -1.12
SUDS3-201ENST00000360286 CCDC57Q2TAC2 916 aa8.05□□□□□ -1.12
SUDS3-201ENST00000360286 ANKRD18AQ8IVF6 992 aa8.05□□□□□ -1.12
SUDS3-201ENST00000360286 SP8Q8IXZ3 490 aa8.05□□□□□ -1.12
SUDS3-201ENST00000360286 KLHDC4Q8TBB5 520 aa8.05□□□□□ -1.12
SUDS3-201ENST00000360286 ARFGEF1Q9Y6D6 1849 aa8.04□□□□□ -1.12
SUDS3-201ENST00000360286 RFX5P48382 616 aaPredicted RBP8.04□□□□□ -1.12
SUDS3-201ENST00000360286 PRELPP51888 382 aa8.04□□□□□ -1.12
SUDS3-201ENST00000360286 GPSM2P81274 684 aa8.04□□□□□ -1.12
SUDS3-201ENST00000360286 RASSF7Q02833 373 aa8.04□□□□□ -1.12
SUDS3-201ENST00000360286 CRBNQ96SW2 442 aa8.04□□□□□ -1.12
SUDS3-201ENST00000360286 CDC5LQ99459 802 aaKnown RBP8.04□□□□□ -1.12
SUDS3-201ENST00000360286 PUS3Q9BZE2 481 aaKnown RBP8.04□□□□□ -1.12
SUDS3-201ENST00000360286 DDX19BQ9UMR2 479 aa8.04□□□□□ -1.12
SUDS3-201ENST00000360286 ATP6V0A2Q9Y487 856 aa8.04□□□□□ -1.12
SUDS3-201ENST00000360286 RTL9Q8NET4 1388 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 PNMA6EA0A0J9YXQ4 647 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 WTIPA6NIX2 430 aaPredicted RBP8.03□□□□□ -1.12
SUDS3-201ENST00000360286 NFKBIEO00221 500 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 IGHMBP2P38935 993 aaKnown RBP8.03□□□□□ -1.12
SUDS3-201ENST00000360286 IRX6P78412 446 aaPredicted RBP8.03□□□□□ -1.12
SUDS3-201ENST00000360286 ATP8B2P98198 1209 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 CCDC93Q567U6 631 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 TAF7LQ5H9L4 462 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 MPNDQ8N594 471 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 MPHOSPH8Q99549 860 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 ZBTB40Q9NUA8 1239 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 BSDC1Q9NW68 430 aaPredicted RBP8.03□□□□□ -1.12
SUDS3-201ENST00000360286 MINPP1Q9UNW1 487 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 HDAC5Q9UQL6 1122 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 SPEF2Q9C093 1822 aa8.03□□□□□ -1.12
SUDS3-201ENST00000360286 CCDC88AQ3V6T2 1871 aa8.02□□□□□ -1.12
SUDS3-201ENST00000360286 SRGAP3O43295 1099 aa8.02□□□□□ -1.13
SUDS3-201ENST00000360286 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
SUDS3-201ENST00000360286 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
SUDS3-201ENST00000360286 LRRC24Q50LG9 513 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms