RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CLASRPQ8N2M8 674 aaKnown RBP21■□□□□ 0.95
TPM1-205ENST00000357980 LRP5O75197 1615 aa20.99■□□□□ 0.95
TPM1-205ENST00000357980 CCDC57Q2TAC2 916 aa20.99■□□□□ 0.95
TPM1-205ENST00000357980 ATG9AQ7Z3C6 839 aa20.99■□□□□ 0.95
TPM1-205ENST00000357980 NUTM1Q86Y26 1132 aa20.99■□□□□ 0.95
TPM1-205ENST00000357980 HCLS1P14317 486 aaPredicted RBP20.99■□□□□ 0.95
TPM1-205ENST00000357980 TSHZ3Q63HK5 1081 aa20.99■□□□□ 0.95
TPM1-205ENST00000357980 ZNF594Q96JF6 807 aaPredicted RBP20.99■□□□□ 0.95
TPM1-205ENST00000357980 GREM2Q9H772 168 aa20.99■□□□□ 0.95
TPM1-205ENST00000357980 CIAO1O76071 339 aa20.98■□□□□ 0.95
TPM1-205ENST00000357980 IFIT5Q13325 482 aaKnown RBP20.98■□□□□ 0.95
TPM1-205ENST00000357980 HSP90B1P14625 803 aaKnown RBP20.97■□□□□ 0.95
TPM1-205ENST00000357980 BICDL1Q6ZP65 573 aa20.97■□□□□ 0.95
TPM1-205ENST00000357980 AKT1S1Q96B36 256 aa20.97■□□□□ 0.95
TPM1-205ENST00000357980 CCDC85AQ96PX6 553 aaPredicted RBP20.97■□□□□ 0.95
TPM1-205ENST00000357980 SETDB2Q96T68 719 aa20.97■□□□□ 0.95
TPM1-205ENST00000357980 FBXO3Q9UK99 471 aa20.97■□□□□ 0.95
TPM1-205ENST00000357980 EYA2O00167 538 aa20.97■□□□□ 0.95
TPM1-205ENST00000357980 ITGA6P23229 1130 aa20.97■□□□□ 0.95
TPM1-205ENST00000357980 ZNF827Q17R98 1081 aa20.97■□□□□ 0.95
TPM1-205ENST00000357980 EAF2Q96CJ1 260 aaPredicted RBP20.97■□□□□ 0.95
TPM1-205ENST00000357980 IL15P40933 162 aaPredicted RBP20.96■□□□□ 0.95
TPM1-205ENST00000357980 TFCP2Q12800 502 aa20.96■□□□□ 0.95
TPM1-205ENST00000357980 AACSQ86V21 672 aa20.96■□□□□ 0.95
TPM1-205ENST00000357980 RTL9Q8NET4 1388 aa20.96■□□□□ 0.95
TPM1-205ENST00000357980 ERFEQ4G0M1 354 aa20.95■□□□□ 0.94
TPM1-205ENST00000357980 LRRC24Q50LG9 513 aa20.95■□□□□ 0.94
TPM1-205ENST00000357980 PI4K2BQ8TCG2 481 aa20.95■□□□□ 0.94
TPM1-205ENST00000357980 NYXQ9GZU5 481 aa20.95■□□□□ 0.94
TPM1-205ENST00000357980 TTC41PQ6P2S7 1318 aa20.95■□□□□ 0.94
TPM1-205ENST00000357980 SDSP20132 328 aa20.94■□□□□ 0.94
TPM1-205ENST00000357980 PUS3Q9BZE2 481 aaKnown RBP20.94■□□□□ 0.94
TPM1-205ENST00000357980 ABCC12Q96J65 1359 aa20.94■□□□□ 0.94
TPM1-205ENST00000357980 ANKRD18BA2A2Z9 1011 aa20.94■□□□□ 0.94
TPM1-205ENST00000357980 SEC24BO95487 1268 aa20.94■□□□□ 0.94
TPM1-205ENST00000357980 IFIT2P09913 472 aaKnown RBP20.94■□□□□ 0.94
TPM1-205ENST00000357980 GYS1P13807 737 aa20.94■□□□□ 0.94
TPM1-205ENST00000357980 CARMIL3Q8ND23 1372 aa20.94■□□□□ 0.94
TPM1-205ENST00000357980 AK9Q5TCS8 1911 aa20.93■□□□□ 0.94
TPM1-205ENST00000357980 NFIXQ14938 502 aa20.93■□□□□ 0.94
TPM1-205ENST00000357980 TNNI3KQ59H18 835 aa20.93■□□□□ 0.94
TPM1-205ENST00000357980 SLC10A5Q5PT55 438 aa20.93■□□□□ 0.94
TPM1-205ENST00000357980 FPGT-TNNI3KV9GXZ4 949 aa20.93■□□□□ 0.94
TPM1-205ENST00000357980 SPEF2Q9C093 1822 aa20.92■□□□□ 0.94
TPM1-205ENST00000357980 NBPF5PQ86XG9 351 aaPredicted RBP20.92■□□□□ 0.94
TPM1-205ENST00000357980 RIC1Q4ADV7 1423 aa20.92■□□□□ 0.94
TPM1-205ENST00000357980 CCDC152Q4G0S7 254 aa20.92■□□□□ 0.94
TPM1-205ENST00000357980 TAF7LQ5H9L4 462 aa20.92■□□□□ 0.94
TPM1-205ENST00000357980 CAMKK2Q96RR4 588 aa20.92■□□□□ 0.94
TPM1-205ENST00000357980 GPR108Q9NPR9 543 aa20.92■□□□□ 0.94
TPM1-205ENST00000357980 TLR7Q9NYK1 1049 aaKnown RBP20.92■□□□□ 0.94
TPM1-205ENST00000357980 TFCP2L1Q9NZI6 479 aa20.92■□□□□ 0.94
TPM1-205ENST00000357980 ZNF609O15014 1411 aa20.92■□□□□ 0.94
TPM1-205ENST00000357980 TBC1D9Q6ZT07 1266 aa20.91■□□□□ 0.94
TPM1-205ENST00000357980 CCDC8Q9H0W5 538 aaPredicted RBP20.91■□□□□ 0.94
TPM1-205ENST00000357980 ECHDC1Q9NTX5 307 aa20.91■□□□□ 0.94
TPM1-205ENST00000357980 RIPOR2Q9Y4F9 1068 aa20.91■□□□□ 0.94
TPM1-205ENST00000357980 COL4A1P02462 1669 aa20.9■□□□□ 0.94
TPM1-205ENST00000357980 TNRC6CQ9HCJ0 1690 aaKnown RBP20.9■□□□□ 0.94
TPM1-205ENST00000357980 CDC45O75419 566 aa20.9■□□□□ 0.94
TPM1-205ENST00000357980 TPTE2Q6XPS3 522 aa20.9■□□□□ 0.94
TPM1-205ENST00000357980 GPATCH3Q96I76 525 aa20.9■□□□□ 0.94
TPM1-205ENST00000357980 SF3B3Q15393 1217 aaKnown RBP20.9■□□□□ 0.94
TPM1-205ENST00000357980 C3orf67Q6ZVT6 689 aa20.9■□□□□ 0.94
TPM1-205ENST00000357980 DBNLQ9UJU6 430 aaKnown RBP20.9■□□□□ 0.94
TPM1-205ENST00000357980 QSER1Q2KHR3 1735 aa20.89■□□□□ 0.94
TPM1-205ENST00000357980 GLRX3O76003 335 aaKnown RBP20.89■□□□□ 0.93
TPM1-205ENST00000357980 LDHAL6AQ6ZMR3 332 aa20.89■□□□□ 0.93
TPM1-205ENST00000357980 ERC2O15083 957 aa20.88■□□□□ 0.93
TPM1-205ENST00000357980 GTF2E1P29083 439 aaPredicted RBP20.88■□□□□ 0.93
TPM1-205ENST00000357980 TM4SF1P30408 202 aa20.88■□□□□ 0.93
TPM1-205ENST00000357980 EN1Q05925 392 aaPredicted RBP20.88■□□□□ 0.93
TPM1-205ENST00000357980 EZH2Q15910 746 aaKnown RBP20.88■□□□□ 0.93
TPM1-205ENST00000357980 SEC31BQ9NQW1 1179 aa20.88■□□□□ 0.93
TPM1-205ENST00000357980 TAF1P21675 1872 aa20.88■□□□□ 0.93
TPM1-205ENST00000357980 COL23A1Q86Y22 540 aaPredicted RBP20.88■□□□□ 0.93
TPM1-205ENST00000357980 CEP126Q9P2H0 1117 aa20.88■□□□□ 0.93
TPM1-205ENST00000357980 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
TPM1-205ENST00000357980 A0A1B0GUL6 1792 aa20.86■□□□□ 0.93
TPM1-205ENST00000357980 ILDR1Q86SU0 546 aaPredicted RBP20.86■□□□□ 0.93
TPM1-205ENST00000357980 VGLL2Q8N8G2 317 aa20.86■□□□□ 0.93
TPM1-205ENST00000357980 DBNDD2Q9BQY9 259 aa20.85■□□□□ 0.93
TPM1-205ENST00000357980 CNNM1Q9NRU3 951 aa20.85■□□□□ 0.93
TPM1-205ENST00000357980 PNPLA7Q6ZV29 1317 aa20.85■□□□□ 0.93
TPM1-205ENST00000357980 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
TPM1-205ENST00000357980 ANO8Q9HCE9 1232 aaPredicted RBP20.85■□□□□ 0.93
TPM1-205ENST00000357980 ARAP2Q8WZ64 1704 aa20.85■□□□□ 0.93
TPM1-205ENST00000357980 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
TPM1-205ENST00000357980 A0A1B0GUL7 405 aa20.84■□□□□ 0.93
TPM1-205ENST00000357980 TRIM6-TRIM34B2RNG4 842 aa20.84■□□□□ 0.93
TPM1-205ENST00000357980 METTL24Q5JXM2 366 aa20.84■□□□□ 0.93
TPM1-205ENST00000357980 NLRP3Q96P20 1036 aa20.84■□□□□ 0.93
TPM1-205ENST00000357980 AKAP2Q9Y2D5 859 aa20.84■□□□□ 0.93
TPM1-205ENST00000357980 TIMM10P62072 90 aa20.83■□□□□ 0.93
TPM1-205ENST00000357980 DDR1Q08345 913 aa20.83■□□□□ 0.93
TPM1-205ENST00000357980 PRR5LQ6MZQ0 368 aa20.83■□□□□ 0.93
TPM1-205ENST00000357980 CCDC24Q8N4L8 307 aa20.83■□□□□ 0.93
TPM1-205ENST00000357980 MROH5Q6ZUA9 1318 aa20.83■□□□□ 0.92
TPM1-205ENST00000357980 POLRMTO00411 1230 aaKnown RBP20.83■□□□□ 0.92
TPM1-205ENST00000357980 ATP5JP18859 108 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms