RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FEZ2Q9UHY8 353 aaPredicted RBP14.64□□□□□ -0.07
SMC4-202ENST00000357388 COMMD10Q9Y6G5 202 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 AQRO60306 1485 aaKnown RBP eCLIP14.64□□□□□ -0.074e-8■■■■■ 71.8
SMC4-202ENST00000357388 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 ERBINQ96RT1 1412 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 LRPPRCP42704 1394 aaKnown RBP14.64□□□□□ -0.07
SMC4-202ENST00000357388 GOLGA8AA7E2F4 631 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 GOLGA8BA8MQT2 603 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 PTCD1O75127 700 aaKnown RBP14.64□□□□□ -0.07
SMC4-202ENST00000357388 NUTM1Q86Y26 1132 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 NUDT16Q96DE0 195 aaKnown RBP14.64□□□□□ -0.07
SMC4-202ENST00000357388 UBA5Q9GZZ9 404 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 ZSWIM4Q9H7M6 989 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 USH1CQ9Y6N9 552 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 DAPK1P53355 1430 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 KRT86O43790 486 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 ATP11AP98196 1134 aa14.64□□□□□ -0.07
SMC4-202ENST00000357388 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
SMC4-202ENST00000357388 TRMT112Q9UI30 125 aaKnown RBP14.63□□□□□ -0.07
SMC4-202ENST00000357388 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
SMC4-202ENST00000357388 ZSCAN22P10073 491 aaPredicted RBP14.63□□□□□ -0.07
SMC4-202ENST00000357388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMC4-202ENST00000357388 MKRN1Q9UHC7 482 aaKnown RBP14.63□□□□□ -0.07
SMC4-202ENST00000357388 XRCC6P12956 609 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMC4-202ENST00000357388 HCLS1P14317 486 aaPredicted RBP14.63□□□□□ -0.07
SMC4-202ENST00000357388 CCDC186Q7Z3E2 898 aa14.63□□□□□ -0.07
SMC4-202ENST00000357388 C10orf67Q8IYJ2 551 aa14.63□□□□□ -0.07
SMC4-202ENST00000357388 NGLY1Q96IV0 654 aa14.63□□□□□ -0.07
SMC4-202ENST00000357388 ZFP91Q96JP5 570 aaPredicted RBP14.63□□□□□ -0.07
SMC4-202ENST00000357388 LRRC9Q6ZRR7 1453 aa14.63□□□□□ -0.07
SMC4-202ENST00000357388 CIB2O75838 187 aa14.63□□□□□ -0.07
SMC4-202ENST00000357388 MAP7D1Q3KQU3 841 aa14.63□□□□□ -0.07
SMC4-202ENST00000357388 KCNG4Q8TDN1 519 aa14.63□□□□□ -0.07
SMC4-202ENST00000357388 MYO1BO43795 1136 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 HLA-DOAP06340 250 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 VAV2P52735 878 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 EXOC5O00471 708 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 BAG3O95817 575 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 ATP5DP30049 168 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 RRS1Q15050 365 aaKnown RBP14.62□□□□□ -0.07
SMC4-202ENST00000357388 SPTY2D1Q68D10 685 aaPredicted RBP14.62□□□□□ -0.07
SMC4-202ENST00000357388 STMN2Q93045 179 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 EVI5LQ96CN4 794 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 CDC5LQ99459 802 aaKnown RBP14.62□□□□□ -0.07
SMC4-202ENST00000357388 C9orf84Q5VXU9 1444 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 RANBP6O60518 1105 aaKnown RBP14.62□□□□□ -0.07
SMC4-202ENST00000357388 GIGYF1O75420 1035 aaPredicted RBP14.62□□□□□ -0.07
SMC4-202ENST00000357388 TERF1P54274 439 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 NLRP5P59047 1200 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 CEP128Q6ZU80 1094 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 CATIPQ7Z7H3 387 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 ZNF213O14771 459 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 GBP1P32455 592 aa14.62□□□□□ -0.07
SMC4-202ENST00000357388 C6orf229H3BNL8 230 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 TAF7Q15545 349 aaPredicted RBP14.61□□□□□ -0.07
SMC4-202ENST00000357388 KIAA1524Q8TCG1 905 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 JAKMIP2Q96AA8 810 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 ERO1AQ96HE7 468 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 TRIM47Q96LD4 638 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 SSX2IPQ9Y2D8 614 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 PRC1O43663 620 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 SELENOSQ9BQE4 189 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 KIAA1107Q9UPP5 1409 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 BIN1O00499 593 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 TTF1Q15361 905 aaPredicted RBP14.61□□□□□ -0.07
SMC4-202ENST00000357388 USP37Q86T82 979 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 VCX3BQ9H321 246 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 MTRF1LQ9UGC7 380 aaKnown RBP14.61□□□□□ -0.07
SMC4-202ENST00000357388 DUSP27Q5VZP5 1158 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 RPUSD2Q8IZ73 545 aaKnown RBP14.61□□□□□ -0.07
SMC4-202ENST00000357388 CEP120Q8N960 986 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 MYD88Q99836 296 aa14.61□□□□□ -0.07
SMC4-202ENST00000357388 RBM27Q9P2N5 1060 aaKnown RBP14.61□□□□□ -0.07
SMC4-202ENST00000357388 ARHGAP25P42331 645 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 TPD52P55327 224 aaPredicted RBP14.6□□□□□ -0.07
SMC4-202ENST00000357388 TSNAXIP1Q2TAA8 658 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 ANO6Q4KMQ2 910 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 EXOC1Q9NV70 894 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 EXOC6BQ9Y2D4 811 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 SYKP43405 635 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 TNNC1P63316 161 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 CROCCP2Q86T23 111 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 IARSP41252 1262 aaKnown RBP14.6□□□□□ -0.07
SMC4-202ENST00000357388 KIF5AQ12840 1032 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 TSGA10Q9BZW7 698 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 VCXQ9H320 206 aa14.6□□□□□ -0.07
SMC4-202ENST00000357388 CASQ2O14958 399 aaPredicted RBP14.59□□□□□ -0.07
SMC4-202ENST00000357388 RARSP54136 660 aaKnown RBP14.59□□□□□ -0.07
SMC4-202ENST00000357388 SNX21Q969T3 373 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 SYT1P21579 422 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 CLNS1AP54105 237 aaKnown RBP14.59□□□□□ -0.07
SMC4-202ENST00000357388 TCERG1LQ5VWI1 586 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 INTS8Q75QN2 995 aaKnown RBP14.59□□□□□ -0.07
SMC4-202ENST00000357388 AFAP1L1Q8TED9 768 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 UBA7P41226 1012 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 NBPF8Q3BBV2 869 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 ATP2A2P16615 1042 aaKnown RBP14.59□□□□□ -0.07
SMC4-202ENST00000357388 PDE4BQ07343 736 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 KRBA2Q6ZNG9 492 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 FMNL3Q8IVF7 1028 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms