RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 CCDC171Q6TFL3 1326 aa34.48■■■■□ 3.11
SDCCAG3-202ENST00000357365 PRPF40BQ6NWY9 871 aaKnown RBP34.48■■■■□ 3.11
SDCCAG3-202ENST00000357365 ITPK1Q13572 414 aa34.47■■■■□ 3.11
SDCCAG3-202ENST00000357365 LOC102724428A0A0B4J2F2 783 aa34.47■■■■□ 3.11
SDCCAG3-202ENST00000357365 CPA1P15085 419 aa34.47■■■■□ 3.11
SDCCAG3-202ENST00000357365 SIK1P57059 783 aa34.47■■■■□ 3.11
SDCCAG3-202ENST00000357365 ZNF589Q86UQ0 364 aaPredicted RBP34.47■■■■□ 3.11
SDCCAG3-202ENST00000357365 PLA2G12BQ9BX93 195 aa34.47■■■■□ 3.11
SDCCAG3-202ENST00000357365 HIP1O00291 1037 aa34.46■■■■□ 3.11
SDCCAG3-202ENST00000357365 MYH14Q7Z406 1995 aaKnown RBP34.46■■■■□ 3.11
SDCCAG3-202ENST00000357365 CSF1RP07333 972 aa34.46■■■■□ 3.11
SDCCAG3-202ENST00000357365 DDX46Q7L014 1031 aaKnown RBP34.46■■■■□ 3.11
SDCCAG3-202ENST00000357365 NGLY1Q96IV0 654 aa34.46■■■■□ 3.11
SDCCAG3-202ENST00000357365 UBN2Q6ZU65 1347 aa34.45■■■■□ 3.11
SDCCAG3-202ENST00000357365 CIAO1O76071 339 aa34.45■■■■□ 3.11
SDCCAG3-202ENST00000357365 CRKLP46109 303 aaKnown RBP34.45■■■■□ 3.11
SDCCAG3-202ENST00000357365 HAUS7Q99871 368 aa34.45■■■■□ 3.11
SDCCAG3-202ENST00000357365 ZNF609O15014 1411 aa34.44■■■■□ 3.1
SDCCAG3-202ENST00000357365 MCM2P49736 904 aa34.44■■■■□ 3.1
SDCCAG3-202ENST00000357365 ADCK5Q3MIX3 580 aa34.44■■■■□ 3.1
SDCCAG3-202ENST00000357365 HSP90AB3PQ58FF7 597 aa34.44■■■■□ 3.1
SDCCAG3-202ENST00000357365 A0A1B0GUL7 405 aa34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 EIF5P55010 431 aaKnown RBP34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 RBM8AQ9Y5S9 174 aaKnown RBP34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 BCL9LQ86UU0 1499 aa34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 LARP6Q9BRS8 491 aaKnown RBP34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 GPR108Q9NPR9 543 aa34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 CCDC87Q9NVE4 849 aa34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 TRMT112Q9UI30 125 aaKnown RBP34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 MED23Q9ULK4 1368 aa34.43■■■■□ 3.1
SDCCAG3-202ENST00000357365 NECTIN1Q15223 517 aa34.42■■■■□ 3.1
SDCCAG3-202ENST00000357365 SNRKQ9NRH2 765 aa34.42■■■■□ 3.1
SDCCAG3-202ENST00000357365 GREM2Q9H772 168 aa34.42■■■■□ 3.1
SDCCAG3-202ENST00000357365 CDHR2Q9BYE9 1310 aa34.42■■■■□ 3.1
SDCCAG3-202ENST00000357365 PALLDQ8WX93 1383 aa34.42■■■■□ 3.1
SDCCAG3-202ENST00000357365 TTLL11Q8NHH1 800 aa34.41■■■■□ 3.1
SDCCAG3-202ENST00000357365 MAP4K1Q92918 833 aa34.41■■■■□ 3.1
SDCCAG3-202ENST00000357365 TTC14Q96N46 770 aa34.41■■■■□ 3.1
SDCCAG3-202ENST00000357365 ERVV-1B6SEH8 477 aa34.41■■■■□ 3.1
SDCCAG3-202ENST00000357365 IFIT5Q13325 482 aaKnown RBP34.41■■■■□ 3.1
SDCCAG3-202ENST00000357365 CWC22Q9HCG8 908 aaKnown RBP34.41■■■■□ 3.1
SDCCAG3-202ENST00000357365 IRS4O14654 1257 aaPredicted RBP34.4■■■■□ 3.1
SDCCAG3-202ENST00000357365 CYP2E1P05181 493 aaPredicted RBP34.4■■■■□ 3.1
SDCCAG3-202ENST00000357365 MYH3P11055 1940 aa34.4■■■■□ 3.1
SDCCAG3-202ENST00000357365 CASTP20810 708 aaKnown RBP34.4■■■■□ 3.1
SDCCAG3-202ENST00000357365 CUL4AQ13619 759 aa34.4■■■■□ 3.1
SDCCAG3-202ENST00000357365 SLFNL1Q499Z3 407 aa34.39■■■■□ 3.1
SDCCAG3-202ENST00000357365 SEC62Q99442 399 aaKnown RBP34.39■■■■□ 3.1
SDCCAG3-202ENST00000357365 CEP126Q9P2H0 1117 aa34.39■■■■□ 3.1
SDCCAG3-202ENST00000357365 COL9A3Q14050 684 aaPredicted RBP34.39■■■■□ 3.1
SDCCAG3-202ENST00000357365 TAF7LQ5H9L4 462 aa34.39■■■■□ 3.1
SDCCAG3-202ENST00000357365 GBP4Q96PP9 640 aa34.39■■■■□ 3.1
SDCCAG3-202ENST00000357365 TRAK2O60296 914 aa34.38■■■■□ 3.09
SDCCAG3-202ENST00000357365 ZNF34Q8IZ26 560 aa34.38■■■■□ 3.09
SDCCAG3-202ENST00000357365 DDX11L8A8MPP1 907 aa34.38■■■■□ 3.09
SDCCAG3-202ENST00000357365 GOLIM4O00461 696 aa34.38■■■■□ 3.09
SDCCAG3-202ENST00000357365 ITGA6P23229 1130 aa34.38■■■■□ 3.09
SDCCAG3-202ENST00000357365 CREB3L3Q68CJ9 461 aa34.38■■■■□ 3.09
SDCCAG3-202ENST00000357365 ZDHHC9Q9Y397 364 aa34.38■■■■□ 3.09
SDCCAG3-202ENST00000357365 ADORA1P30542 326 aa34.37■■■■□ 3.09
SDCCAG3-202ENST00000357365 KCNJ4P48050 445 aa34.37■■■■□ 3.09
SDCCAG3-202ENST00000357365 AK2P54819 239 aa34.37■■■■□ 3.09
SDCCAG3-202ENST00000357365 CTSWP56202 376 aa34.37■■■■□ 3.09
SDCCAG3-202ENST00000357365 CCDC129Q6ZRS4 1044 aa34.37■■■■□ 3.09
SDCCAG3-202ENST00000357365 KCNB2Q92953 911 aa34.37■■■■□ 3.09
SDCCAG3-202ENST00000357365 JAKMIP1Q96N16 626 aaKnown RBP34.37■■■■□ 3.09
SDCCAG3-202ENST00000357365 TAF6LQ9Y6J9 622 aa34.37■■■■□ 3.09
SDCCAG3-202ENST00000357365 FAM177BA6PVY3 158 aa34.36■■■■□ 3.09
SDCCAG3-202ENST00000357365 PTF1AQ7RTS3 328 aa34.36■■■■□ 3.09
SDCCAG3-202ENST00000357365 KCNQ4P56696 695 aa34.36■■■■□ 3.09
SDCCAG3-202ENST00000357365 NUCB2P80303 420 aa34.36■■■■□ 3.09
SDCCAG3-202ENST00000357365 GZF1Q9H116 711 aaPredicted RBP34.36■■■■□ 3.09
SDCCAG3-202ENST00000357365 JCADQ9P266 1359 aa34.35■■■■□ 3.09
SDCCAG3-202ENST00000357365 VPS72Q15906 364 aa34.35■■■■□ 3.09
SDCCAG3-202ENST00000357365 PAG1Q9NWQ8 432 aa34.35■■■■□ 3.09
SDCCAG3-202ENST00000357365 RUFY3Q7L099 469 aa34.34■■■■□ 3.09
SDCCAG3-202ENST00000357365 KBTBD3Q8NAB2 608 aa34.34■■■■□ 3.09
SDCCAG3-202ENST00000357365 SLC27A2O14975 620 aa34.33■■■■□ 3.09
SDCCAG3-202ENST00000357365 TAF5LO75529 589 aa34.33■■■■□ 3.09
SDCCAG3-202ENST00000357365 BAG4O95429 457 aaKnown RBP34.33■■■■□ 3.09
SDCCAG3-202ENST00000357365 SUSD4Q5VX71 490 aa34.33■■■■□ 3.09
SDCCAG3-202ENST00000357365 RIC1Q4ADV7 1423 aa34.32■■■■□ 3.08
SDCCAG3-202ENST00000357365 IFIT1P09914 478 aaKnown RBP34.32■■■■□ 3.08
SDCCAG3-202ENST00000357365 XAGE2Q96GT9 111 aa34.32■■■■□ 3.08
SDCCAG3-202ENST00000357365 CAMTA2O94983 1202 aa34.31■■■■□ 3.08
SDCCAG3-202ENST00000357365 RIPOR2Q9Y4F9 1068 aa34.31■■■■□ 3.08
SDCCAG3-202ENST00000357365 RREB1Q92766 1687 aa34.31■■■■□ 3.08
SDCCAG3-202ENST00000357365 FOXD4L5Q5VV16 416 aaPredicted RBP34.31■■■■□ 3.08
SDCCAG3-202ENST00000357365 LDHAL6AQ6ZMR3 332 aa34.31■■■■□ 3.08
SDCCAG3-202ENST00000357365 FOXD4L4Q8WXT5 416 aaPredicted RBP34.31■■■■□ 3.08
SDCCAG3-202ENST00000357365 FBXO3Q9UK99 471 aa34.31■■■■□ 3.08
SDCCAG3-202ENST00000357365 CHAMP1Q96JM3 812 aa34.3■■■■□ 3.08
SDCCAG3-202ENST00000357365 ZSWIM6Q9HCJ5 1215 aa34.3■■■■□ 3.08
SDCCAG3-202ENST00000357365 PDE8AO60658 829 aa34.3■■■■□ 3.08
SDCCAG3-202ENST00000357365 HCLS1P14317 486 aaPredicted RBP34.3■■■■□ 3.08
SDCCAG3-202ENST00000357365 CLEC17AQ6ZS10 378 aa34.3■■■■□ 3.08
SDCCAG3-202ENST00000357365 ZKSCAN1P17029 563 aaPredicted RBP34.29■■■■□ 3.08
SDCCAG3-202ENST00000357365 INTS4Q96HW7 963 aaKnown RBP34.29■■■■□ 3.08
SDCCAG3-202ENST00000357365 RFX7Q2KHR2 1363 aa34.29■■■■□ 3.08
SDCCAG3-202ENST00000357365 ANKRD18BA2A2Z9 1011 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms