RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 STMN4Q9H169 189 aaPredicted RBP7.58□□□□□ -1.2
TRIM38-201ENST00000357085 ADGRB3O60242 1522 aa7.58□□□□□ -1.2
TRIM38-201ENST00000357085 CCDC69A6NI79 296 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 FAM160A1Q05DH4 1040 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 CNPY4Q8N129 248 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 TDRD7Q8NHU6 1098 aaKnown RBP7.57□□□□□ -1.2
TRIM38-201ENST00000357085 SERPINC1P01008 464 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 ANKS4BQ8N8V4 417 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 VPS18Q9P253 973 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 MROH2AA6NES4 1674 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 SHPRHQ149N8 1683 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 CCDC175P0C221 793 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 CLUL1Q15846 466 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 SMARCC1Q92922 1105 aaPredicted RBP7.57□□□□□ -1.2
TRIM38-201ENST00000357085 ALS2CR12Q96Q35 445 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 CEP83Q9Y592 693 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 ME1P48163 572 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 DDX12PQ92771 950 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 P3H4Q92791 437 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 SETSIPP0DME0 302 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 SLC4A10Q6U841 1118 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 PYCARDQ9ULZ3 195 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 ARHGAP6O43182 974 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 TOP1P11387 765 aaKnown RBP7.57□□□□□ -1.2
TRIM38-201ENST00000357085 APBA1Q02410 837 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 SYT10Q6XYQ8 523 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 CROCCP2Q86T23 111 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 OSBPL3Q9H4L5 887 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.57□□□□□ -1.2
TRIM38-201ENST00000357085 NOS1P29475 1434 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 CTAGE9A4FU28 777 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 KIF3BO15066 747 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 GIGYF2Q6Y7W6 1299 aaKnown RBP7.57□□□□□ -1.2
TRIM38-201ENST00000357085 FAM71BQ8TC56 605 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 RSRC1Q96IZ7 334 aaKnown RBP7.57□□□□□ -1.2
TRIM38-201ENST00000357085 FMNL2Q96PY5 1086 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 ATP10BO94823 1461 aa7.57□□□□□ -1.2
TRIM38-201ENST00000357085 HNRNPH2P55795 449 aaKnown RBP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 ANKRD18AQ8IVF6 992 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 ARFGAP2Q8N6H7 521 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 PHF23Q9BUL5 403 aaPredicted RBP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 WASHC4Q2M389 1173 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 IFT172Q9UG01 1749 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 PRKAR2BP31323 418 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 SART3Q15020 963 aaKnown RBP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 ESYT1Q9BSJ8 1104 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 SPINK5Q9NQ38 1064 aaPredicted RBP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 SLFN14P0C7P3 912 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 PPFIA1Q13136 1202 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 FBXO38Q6PIJ6 1188 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 SWAP70Q9UH65 585 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 RFX7Q2KHR2 1363 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 CNGA4Q8IV77 575 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 CCDC51Q96ER9 411 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 NRXN1Q9ULB1 1477 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 TXLNAP40222 546 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 MCTP2Q6DN12 878 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 SARM1Q6SZW1 724 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 MMS22LQ6ZRQ5 1243 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 PSME1Q06323 249 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 APLFQ8IW19 511 aaPredicted RBP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 EVI5LQ96CN4 794 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 U3KPZ7 1027 aaPredicted RBP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 ZCCHC11Q5TAX3 1644 aaKnown RBP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 MAP2P11137 1827 aaKnown RBP7.56□□□□□ -1.2
TRIM38-201ENST00000357085 TSGA10Q9BZW7 698 aa7.56□□□□□ -1.2
TRIM38-201ENST00000357085 KIF4BQ2VIQ3 1234 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 BPIFA3Q9BQP9 254 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 LUC7L3O95232 432 aaKnown RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 SLC8A1P32418 973 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 MAGEA9P43362 315 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 LOC102724159A0A0B4J2E5 919 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 PWP2Q15269 919 aaKnown RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 FEZ2Q9UHY8 353 aaPredicted RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 TTF2Q9UNY4 1162 aaKnown RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 SKIDA1Q1XH10 827 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 TMC6Q7Z403 805 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 DLC1Q96QB1 1528 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 CD2BP2O95400 341 aaKnown RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 SPECC1LQ69YQ0 1117 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 NAA16Q6N069 864 aaPredicted RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 EDC4Q6P2E9 1401 aaKnown RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 CCDC151A5D8V7 595 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 RALYLQ86SE5 291 aaKnown RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 C9orf78Q9NZ63 289 aaPredicted RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 KIF3CO14782 793 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 SDSP20132 328 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 HSPA4P34932 840 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 LMNB2Q03252 620 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 FAM177A1Q8N128 213 aaPredicted RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 PLCD4Q9BRC7 762 aa7.55□□□□□ -1.2
TRIM38-201ENST00000357085 CPSF2Q9P2I0 782 aaKnown RBP7.55□□□□□ -1.2
TRIM38-201ENST00000357085 RBM33Q96EV2 1170 aaKnown RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 NSRP1Q9H0G5 558 aaKnown RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 CTAGE15A4D2H0 777 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 CTAGE8P0CG41 777 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 PDE1AP54750 535 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 CTAGE6Q86UF2 777 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms