RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 TBC1D9Q6ZT07 1266 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 TBC1D5Q92609 795 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 SPAG5Q96R06 1193 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 NCOA7Q8NI08 942 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 LRRC27Q9C0I9 530 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 CABP5Q9NP86 173 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 AFMP43652 599 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 PAXBP1Q9Y5B6 917 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 UBASH3AP57075 661 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 TSHZ3Q63HK5 1081 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
RXRA-201ENST00000356384 RPGRIP1LQ68CZ1 1315 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
RXRA-201ENST00000356384 SRRTQ9BXP5 876 aaKnown RBP18.36■□□□□ 0.53
RXRA-201ENST00000356384 CCDC172P0C7W6 258 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
RXRA-201ENST00000356384 APBB1IPQ7Z5R6 666 aaPredicted RBP18.36■□□□□ 0.53
RXRA-201ENST00000356384 ZNF354CQ86Y25 554 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 CAMSAP2Q08AD1 1489 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 MCM5P33992 734 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 LDHAL6AQ6ZMR3 332 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 MAP3K2Q9Y2U5 619 aa18.36■□□□□ 0.53
RXRA-201ENST00000356384 SYKP43405 635 aa18.35■□□□□ 0.53
RXRA-201ENST00000356384 SREK1Q8WXA9 508 aaKnown RBP18.35■□□□□ 0.53
RXRA-201ENST00000356384 RMND1Q9NWS8 449 aa18.35■□□□□ 0.53
RXRA-201ENST00000356384 PLVAPQ9BX97 442 aa18.35■□□□□ 0.53
RXRA-201ENST00000356384 KIF14Q15058 1648 aa18.35■□□□□ 0.53
RXRA-201ENST00000356384 BAG3O95817 575 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 LDHCP07864 332 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 FLIIQ13045 1269 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 UVSSAQ2YD98 709 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 ZNF830Q96NB3 372 aaPredicted RBP18.34■□□□□ 0.53
RXRA-201ENST00000356384 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.34■□□□□ 0.53
RXRA-201ENST00000356384 NME9Q86XW9 330 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 CTAGE15A4D2H0 777 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 CTAGE8P0CG41 777 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 CTAGE6Q86UF2 777 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 CTAGE4Q8IX94 777 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 DDX12PQ92771 950 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 RAB3IL1Q8TBN0 382 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 ATP5J2-PTCD1G3V325 749 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
RXRA-201ENST00000356384 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.53
RXRA-201ENST00000356384 HLA-DOAP06340 250 aa18.33■□□□□ 0.53
RXRA-201ENST00000356384 CYLC1P35663 651 aaPredicted RBP18.33■□□□□ 0.53
RXRA-201ENST00000356384 MRPS9P82933 396 aaKnown RBP18.33■□□□□ 0.53
RXRA-201ENST00000356384 NSRP1Q9H0G5 558 aaKnown RBP18.33■□□□□ 0.53
RXRA-201ENST00000356384 CEBPAP49715 358 aaPredicted RBP18.33■□□□□ 0.53
RXRA-201ENST00000356384 RSPH14Q9UHP6 348 aa18.33■□□□□ 0.53
RXRA-201ENST00000356384 KIF4AO95239 1232 aa18.33■□□□□ 0.52
RXRA-201ENST00000356384 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
RXRA-201ENST00000356384 CCDC171Q6TFL3 1326 aa18.33■□□□□ 0.52
RXRA-201ENST00000356384 ATRIPQ8WXE1 791 aa18.33■□□□□ 0.52
RXRA-201ENST00000356384 ABCC11Q96J66 1382 aa18.33■□□□□ 0.52
RXRA-201ENST00000356384 TRIM27P14373 513 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 MCM6Q14566 821 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 DNAI1Q9UI46 699 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 PTGS1P23219 599 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 STAT6P42226 847 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 GJC1P36383 396 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 NECAB1Q8N987 351 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 STX8Q9UNK0 236 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.521e-6■■■■■ 41.5
RXRA-201ENST00000356384 CCDC160A6NGH7 325 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 NBPF7P0C2Y1 421 aaPredicted RBP18.32■□□□□ 0.52
RXRA-201ENST00000356384 OTUD6BQ8N6M0 293 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 DYNC1I1O14576 645 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 CAVIN2O95810 425 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 ERMNQ8TAM6 284 aa18.32■□□□□ 0.52
RXRA-201ENST00000356384 POGZQ7Z3K3 1410 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 PHACTR2O75167 634 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 KRT13P13646 458 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 KRT222Q8N1A0 295 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 CDC5LQ99459 802 aaKnown RBP18.31■□□□□ 0.52
RXRA-201ENST00000356384 SELENOOQ9BVL4 669 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 RASAL2Q9UJF2 1139 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 NAIPQ13075 1403 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 CA8P35219 290 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
RXRA-201ENST00000356384 HMG20BQ9P0W2 317 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 MRVI1Q9Y6F6 885 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 PTPRCP08575 1304 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 BRF1Q92994 677 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 SKILP12757 684 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 TERF1P54274 439 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 ANO6Q4KMQ2 910 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 ARFGAP3Q9NP61 516 aa18.31■□□□□ 0.52
RXRA-201ENST00000356384 CCDC63Q8NA47 563 aa18.3■□□□□ 0.52
RXRA-201ENST00000356384 JARID2Q92833 1246 aaPredicted RBP18.3■□□□□ 0.52
RXRA-201ENST00000356384 CTAGE1Q96RT6 745 aa18.3■□□□□ 0.52
RXRA-201ENST00000356384 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
RXRA-201ENST00000356384 WTAPQ15007 396 aa18.3■□□□□ 0.52
RXRA-201ENST00000356384 UBE3BQ7Z3V4 1068 aa18.3■□□□□ 0.52
RXRA-201ENST00000356384 CFAP57Q96MR6 1250 aa18.3■□□□□ 0.52
RXRA-201ENST00000356384 MSL1Q68DK7 614 aa18.3■□□□□ 0.52
RXRA-201ENST00000356384 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
RXRA-201ENST00000356384 TIGD1Q96MW7 591 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms