RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 CALRP27797 417 aaKnown RBP18.38■□□□□ 0.53
RTN3-205ENST00000356000 PPP2R5AQ15172 486 aa18.38■□□□□ 0.53
RTN3-205ENST00000356000 MRPL50Q8N5N7 158 aaKnown RBP18.38■□□□□ 0.53
RTN3-205ENST00000356000 ESYT1Q9BSJ8 1104 aa18.38■□□□□ 0.53
RTN3-205ENST00000356000 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
RTN3-205ENST00000356000 TACO1Q9BSH4 297 aaKnown RBP18.37■□□□□ 0.53
RTN3-205ENST00000356000 PHLPP2Q6ZVD8 1323 aa18.37■□□□□ 0.53
RTN3-205ENST00000356000 C21orf2O43822 256 aa18.37■□□□□ 0.53
RTN3-205ENST00000356000 KCNJ6P48051 423 aa18.37■□□□□ 0.53
RTN3-205ENST00000356000 GPR161Q8N6U8 529 aaKnown RBP18.37■□□□□ 0.53
RTN3-205ENST00000356000 JMYQ8N9B5 988 aa18.37■□□□□ 0.53
RTN3-205ENST00000356000 DNAJC25Q9H1X3 360 aa18.37■□□□□ 0.53
RTN3-205ENST00000356000 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
RTN3-205ENST00000356000 SPATA31A6Q5VVP1 1343 aa18.37■□□□□ 0.53
RTN3-205ENST00000356000 MAP2K7O14733 419 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 GORABQ5T7V8 394 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 TBC1D22AQ8WUA7 517 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 SH3BP1Q9Y3L3 701 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 GSDMDP57764 484 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 SSH2Q76I76 1423 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 SMC2O95347 1197 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 MNAT1P51948 309 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 EVCP57679 992 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 IQCB1Q15051 598 aa18.36■□□□□ 0.53
RTN3-205ENST00000356000 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
RTN3-205ENST00000356000 ANKRD65E5RJM6 399 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 ETF1P62495 437 aaKnown RBP18.35■□□□□ 0.53
RTN3-205ENST00000356000 SEMA3FQ13275 785 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 LRRC31Q6UY01 552 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 OSBPL3Q9H4L5 887 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 VPS18Q9P253 973 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 MTMR6Q9Y217 621 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 TTC41PQ6P2S7 1318 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 KIF24Q5T7B8 1368 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 MYO5BQ9ULV0 1848 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 COL16A1Q07092 1604 aaPredicted RBP18.35■□□□□ 0.53
RTN3-205ENST00000356000 SGSM2O43147 1006 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 LRRFIP1Q32MZ4 808 aaKnown RBP18.35■□□□□ 0.53
RTN3-205ENST00000356000 TTC6Q86TZ1 520 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 MICALL1Q8N3F8 863 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 CLSTN2Q9H4D0 955 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
RTN3-205ENST00000356000 GOLGA6L19H0YKK7 550 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 USP8P40818 1118 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 EIF5P55010 431 aaKnown RBP18.34■□□□□ 0.53
RTN3-205ENST00000356000 PRAM1Q96QH2 718 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 YTHDC2Q9H6S0 1430 aaKnown RBP18.34■□□□□ 0.53
RTN3-205ENST00000356000 SPHKAPQ2M3C7 1700 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
RTN3-205ENST00000356000 ANKRD44Q8N8A2 993 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 STAG1Q8WVM7 1258 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 SYTL4Q96C24 671 aaPredicted RBP18.34■□□□□ 0.53
RTN3-205ENST00000356000 CARD6Q9BX69 1037 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 OSBPL5Q9H0X9 879 aaPredicted RBP18.34■□□□□ 0.53
RTN3-205ENST00000356000 DNAI1Q9UI46 699 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 SMC3Q9UQE7 1217 aa18.34■□□□□ 0.53
RTN3-205ENST00000356000 XRN1Q8IZH2 1706 aaKnown RBP18.33■□□□□ 0.53
RTN3-205ENST00000356000 GNAI3P08754 354 aa18.33■□□□□ 0.53
RTN3-205ENST00000356000 CADPS2Q86UW7 1296 aa18.33■□□□□ 0.53
RTN3-205ENST00000356000 KAT2BQ92831 832 aa18.33■□□□□ 0.53
RTN3-205ENST00000356000 ADAMTS13Q76LX8 1427 aa18.33■□□□□ 0.52
RTN3-205ENST00000356000 HNRNPH1P31943 449 aaKnown RBP18.33■□□□□ 0.52
RTN3-205ENST00000356000 MSL3Q8N5Y2 521 aaKnown RBP18.33■□□□□ 0.52
RTN3-205ENST00000356000 EPC1Q9H2F5 836 aa18.33■□□□□ 0.52
RTN3-205ENST00000356000 SCP2P22307 547 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 FAM107BQ9H098 131 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
RTN3-205ENST00000356000 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 KLHL33A6NCF5 533 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 SRGAP3O43295 1099 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 PPFIA4O75335 1185 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 BIRC2Q13490 618 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 LONRF2Q1L5Z9 754 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 CCDC30Q5VVM6 783 aa18.32■□□□□ 0.52
RTN3-205ENST00000356000 ANO2Q9NQ90 1003 aa18.31■□□□□ 0.52
RTN3-205ENST00000356000 USP32Q8NFA0 1604 aa18.31■□□□□ 0.52
RTN3-205ENST00000356000 PLEKHO1Q53GL0 409 aaPredicted RBP18.31■□□□□ 0.52
RTN3-205ENST00000356000 MIEF2Q96C03 454 aa18.31■□□□□ 0.52
RTN3-205ENST00000356000 AKAP2Q9Y2D5 859 aa18.31■□□□□ 0.52
RTN3-205ENST00000356000 CDK12Q9NYV4 1490 aaPredicted RBP18.31■□□□□ 0.52
RTN3-205ENST00000356000 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 VAMP4O75379 141 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 ERLIN2O94905 339 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 KRT85P78386 507 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 JAKMIP3Q5VZ66 844 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 TTLL5Q6EMB2 1281 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 NBPF10Q6P3W6 841 aaKnown RBP18.3■□□□□ 0.52
RTN3-205ENST00000356000 KCNV1Q6PIU1 500 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 TICAM2Q86XR7 235 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 PARD6BQ9BYG5 372 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 IMPACTQ9P2X3 320 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 RSRC2Q7L4I2 434 aaKnown RBP18.3■□□□□ 0.52
RTN3-205ENST00000356000 FAXDC2Q96IV6 333 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 SLAIN2Q9P270 581 aa18.3■□□□□ 0.52
RTN3-205ENST00000356000 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.3■□□□□ 0.52
RTN3-205ENST00000356000 CCDC151A5D8V7 595 aa18.29■□□□□ 0.52
RTN3-205ENST00000356000 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
RTN3-205ENST00000356000 RPAP2Q8IXW5 612 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms