RNA–Protein interactions for RNA: ENST00000355697.6

SFXN4-201, Transcript of sideroflexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN4, Length 1,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-201ENST00000355697 CTSWP56202 376 aa17.22■□□□□ 0.35
SFXN4-201ENST00000355697 STYK1Q6J9G0 422 aa17.22■□□□□ 0.35
SFXN4-201ENST00000355697 C3orf67Q6ZVT6 689 aa17.22■□□□□ 0.35
SFXN4-201ENST00000355697 PLA2G12BQ9BX93 195 aa17.22■□□□□ 0.35
SFXN4-201ENST00000355697 PIM2Q9P1W9 311 aa17.22■□□□□ 0.35
SFXN4-201ENST00000355697 CACNA1SQ13698 1873 aa17.21■□□□□ 0.35
SFXN4-201ENST00000355697 GNAI3P08754 354 aa17.21■□□□□ 0.35
SFXN4-201ENST00000355697 SF3B3Q15393 1217 aaKnown RBP17.21■□□□□ 0.35
SFXN4-201ENST00000355697 CCDC152Q4G0S7 254 aa17.21■□□□□ 0.35
SFXN4-201ENST00000355697 RBM17Q96I25 401 aaKnown RBP17.21■□□□□ 0.35
SFXN4-201ENST00000355697 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
SFXN4-201ENST00000355697 DDX46Q7L014 1031 aaKnown RBP17.2■□□□□ 0.34
SFXN4-201ENST00000355697 CNKSR1Q969H4 720 aa17.2■□□□□ 0.34
SFXN4-201ENST00000355697 MEIS3Q99687 375 aa17.2■□□□□ 0.34
SFXN4-201ENST00000355697 KCNA3P22001 575 aa17.19■□□□□ 0.34
SFXN4-201ENST00000355697 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
SFXN4-201ENST00000355697 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
SFXN4-201ENST00000355697 TTLL6Q8N841 843 aa17.19■□□□□ 0.34
SFXN4-201ENST00000355697 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
SFXN4-201ENST00000355697 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
SFXN4-201ENST00000355697 COG6Q9Y2V7 657 aa17.19■□□□□ 0.34
SFXN4-201ENST00000355697 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
SFXN4-201ENST00000355697 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
SFXN4-201ENST00000355697 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
SFXN4-201ENST00000355697 C20orf194Q5TEA3 1177 aa17.18■□□□□ 0.34
SFXN4-201ENST00000355697 TTLL11Q8NHH1 800 aa17.18■□□□□ 0.34
SFXN4-201ENST00000355697 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
SFXN4-201ENST00000355697 CRAMP1Q96RY5 1269 aa17.18■□□□□ 0.34
SFXN4-201ENST00000355697 CHMP4BQ9H444 224 aaKnown RBP17.18■□□□□ 0.34
SFXN4-201ENST00000355697 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
SFXN4-201ENST00000355697 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
SFXN4-201ENST00000355697 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
SFXN4-201ENST00000355697 FOXO4P98177 505 aa17.16■□□□□ 0.34
SFXN4-201ENST00000355697 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
SFXN4-201ENST00000355697 LMBR1LQ6UX01 489 aa17.16■□□□□ 0.34
SFXN4-201ENST00000355697 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
SFXN4-201ENST00000355697 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
SFXN4-201ENST00000355697 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
SFXN4-201ENST00000355697 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
SFXN4-201ENST00000355697 TAF1P21675 1872 aa17.16■□□□□ 0.34
SFXN4-201ENST00000355697 ZBTB7BO15156 539 aaPredicted RBP17.15■□□□□ 0.34
SFXN4-201ENST00000355697 GNAI2P04899 355 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 CSF1RP07333 972 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 GRAPQ13588 217 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 PRPF40BQ6NWY9 871 aaKnown RBP17.15■□□□□ 0.34
SFXN4-201ENST00000355697 GRAPLQ8TC17 118 aaPredicted RBP17.15■□□□□ 0.34
SFXN4-201ENST00000355697 KAZALD1Q96I82 304 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
SFXN4-201ENST00000355697 GREM2Q9H772 168 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 ARFGEF1Q9Y6D6 1849 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 GPR162Q16538 588 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
SFXN4-201ENST00000355697 ANKRD18BA2A2Z9 1011 aa17.14■□□□□ 0.33
SFXN4-201ENST00000355697 PPEF1O14829 653 aaPredicted RBP17.14■□□□□ 0.33
SFXN4-201ENST00000355697 BBOX1O75936 387 aa17.14■□□□□ 0.33
SFXN4-201ENST00000355697 ITGA6P23229 1130 aa17.14■□□□□ 0.33
SFXN4-201ENST00000355697 IFIT5Q13325 482 aaKnown RBP17.14■□□□□ 0.33
SFXN4-201ENST00000355697 CCDC57Q2TAC2 916 aa17.14■□□□□ 0.33
SFXN4-201ENST00000355697 RABL6Q3YEC7 729 aaPredicted RBP17.14■□□□□ 0.33
SFXN4-201ENST00000355697 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
SFXN4-201ENST00000355697 SEC31BQ9NQW1 1179 aa17.14■□□□□ 0.33
SFXN4-201ENST00000355697 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
SFXN4-201ENST00000355697 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
SFXN4-201ENST00000355697 ANKRD44Q8N8A2 993 aa17.13■□□□□ 0.33
SFXN4-201ENST00000355697 CELF1Q92879 486 aaKnown RBP17.13■□□□□ 0.33
SFXN4-201ENST00000355697 SPEF2Q9C093 1822 aa17.12■□□□□ 0.33
SFXN4-201ENST00000355697 IGHMBP2P38935 993 aaKnown RBP17.12■□□□□ 0.33
SFXN4-201ENST00000355697 RPS8P62241 208 aaKnown RBP17.12■□□□□ 0.33
SFXN4-201ENST00000355697 TAF7LQ5H9L4 462 aa17.12■□□□□ 0.33
SFXN4-201ENST00000355697 SOGA3Q5TF21 947 aa17.12■□□□□ 0.33
SFXN4-201ENST00000355697 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
SFXN4-201ENST00000355697 C21orf2O43822 256 aa17.11■□□□□ 0.33
SFXN4-201ENST00000355697 C1orf115Q9H7X2 142 aa17.11■□□□□ 0.33
SFXN4-201ENST00000355697 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.337e-7■■□□□ 11.4
SFXN4-201ENST00000355697 MPHOSPH8Q99549 860 aa17.1■□□□□ 0.33
SFXN4-201ENST00000355697 ZBTB40Q9NUA8 1239 aa17.1■□□□□ 0.33
SFXN4-201ENST00000355697 GRIN3BO60391 1043 aa17.09■□□□□ 0.33
SFXN4-201ENST00000355697 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
SFXN4-201ENST00000355697 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
SFXN4-201ENST00000355697 ATP6V0A2Q9Y487 856 aa17.09■□□□□ 0.33
SFXN4-201ENST00000355697 COL4A1P02462 1669 aa17.09■□□□□ 0.33
SFXN4-201ENST00000355697 SRGAP3O43295 1099 aa17.08■□□□□ 0.32
SFXN4-201ENST00000355697 MTX1Q13505 466 aa17.08■□□□□ 0.32
SFXN4-201ENST00000355697 CCDC93Q567U6 631 aa17.08■□□□□ 0.32
SFXN4-201ENST00000355697 SP8Q8IXZ3 490 aa17.08■□□□□ 0.32
SFXN4-201ENST00000355697 BSDC1Q9NW68 430 aaPredicted RBP17.08■□□□□ 0.32
SFXN4-201ENST00000355697 LRRC37AA6NMS7 1700 aa17.08■□□□□ 0.32
SFXN4-201ENST00000355697 GOLGB1Q14789 3259 aaKnown RBP17.07■□□□□ 0.32
SFXN4-201ENST00000355697 GRIPAP1Q4V328 841 aa17.07■□□□□ 0.32
SFXN4-201ENST00000355697 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
SFXN4-201ENST00000355697 LDHAL6AQ6ZMR3 332 aa17.06■□□□□ 0.32
SFXN4-201ENST00000355697 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
SFXN4-201ENST00000355697 RTKN2Q8IZC4 609 aa17.06■□□□□ 0.32
SFXN4-201ENST00000355697 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
SFXN4-201ENST00000355697 CNNM1Q9NRU3 951 aa17.06■□□□□ 0.32
SFXN4-201ENST00000355697 FER1L6Q2WGJ9 1857 aa17.06■□□□□ 0.32
SFXN4-201ENST00000355697 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
SFXN4-201ENST00000355697 OLFM4Q6UX06 510 aa17.05■□□□□ 0.32
SFXN4-201ENST00000355697 CEP85Q6P2H3 762 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms