RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 ARXQ96QS3 562 aa12.78□□□□□ -0.36
PTPN2-203ENST00000353319 CHMP5Q9NZZ3 219 aa12.78□□□□□ -0.36
PTPN2-203ENST00000353319 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
PTPN2-203ENST00000353319 CHMP3Q9Y3E7 222 aa12.78□□□□□ -0.36
PTPN2-203ENST00000353319 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
PTPN2-203ENST00000353319 ST18O60284 1047 aa12.77□□□□□ -0.37
PTPN2-203ENST00000353319 TTLL11Q8NHH1 800 aa12.77□□□□□ -0.37
PTPN2-203ENST00000353319 LSG1Q9H089 658 aaKnown RBP12.77□□□□□ -0.37
PTPN2-203ENST00000353319 IL25Q9H293 177 aa12.77□□□□□ -0.37
PTPN2-203ENST00000353319 SLKQ9H2G2 1235 aaPredicted RBP12.77□□□□□ -0.37
PTPN2-203ENST00000353319 BOLA2Q9H3K6 86 aa12.77□□□□□ -0.37
PTPN2-203ENST00000353319 DIAPH3Q9NSV4 1193 aa12.77□□□□□ -0.37
PTPN2-203ENST00000353319 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
PTPN2-203ENST00000353319 RFX7Q2KHR2 1363 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 RAD50Q92878 1312 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 PDE8AO60658 829 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 CAMTA2O94983 1202 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 GPTP24298 496 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 MCM2P49736 904 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 IFIT5Q13325 482 aaKnown RBP12.76□□□□□ -0.37
PTPN2-203ENST00000353319 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 KIAA1211Q6ZU35 1233 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 GJD4Q96KN9 370 aaPredicted RBP12.76□□□□□ -0.37
PTPN2-203ENST00000353319 HAUS7Q99871 368 aa12.76□□□□□ -0.37
PTPN2-203ENST00000353319 TRMT112Q9UI30 125 aaKnown RBP12.76□□□□□ -0.37
PTPN2-203ENST00000353319 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
PTPN2-203ENST00000353319 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
PTPN2-203ENST00000353319 UBN2Q6ZU65 1347 aa12.75□□□□□ -0.37
PTPN2-203ENST00000353319 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
PTPN2-203ENST00000353319 LRRC24Q50LG9 513 aa12.75□□□□□ -0.37
PTPN2-203ENST00000353319 RC3H1Q5TC82 1133 aaKnown RBP12.75□□□□□ -0.37
PTPN2-203ENST00000353319 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
PTPN2-203ENST00000353319 CLEC4GQ6UXB4 293 aa12.75□□□□□ -0.37
PTPN2-203ENST00000353319 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTPN2-203ENST00000353319 KCNB2Q92953 911 aa12.75□□□□□ -0.37
PTPN2-203ENST00000353319 DBNDD2Q9BQY9 259 aa12.75□□□□□ -0.37
PTPN2-203ENST00000353319 CEP126Q9P2H0 1117 aa12.75□□□□□ -0.37
PTPN2-203ENST00000353319 AKAP2Q9Y2D5 859 aa12.75□□□□□ -0.37
PTPN2-203ENST00000353319 CNTNAP4Q9C0A0 1308 aa12.74□□□□□ -0.37
PTPN2-203ENST00000353319 HSPA1LP34931 641 aa12.74□□□□□ -0.37
PTPN2-203ENST00000353319 CTSWP56202 376 aa12.74□□□□□ -0.37
PTPN2-203ENST00000353319 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
PTPN2-203ENST00000353319 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
PTPN2-203ENST00000353319 A0A0G2JS52 829 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
PTPN2-203ENST00000353319 MYT1Q01538 1121 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 SYNE4Q8N205 404 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 PALD1Q9ULE6 856 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 ZNF609O15014 1411 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 ATRNO75882 1429 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 SH3TC1Q8TE82 1336 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 MYH3P11055 1940 aa12.73□□□□□ -0.37
PTPN2-203ENST00000353319 ANKRD18BA2A2Z9 1011 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 KCNA4P22459 653 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 TIMM10P62072 90 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 MEX3CQ5U5Q3 659 aaKnown RBP12.72□□□□□ -0.37
PTPN2-203ENST00000353319 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 UTP14AQ9BVJ6 771 aaKnown RBP12.72□□□□□ -0.37
PTPN2-203ENST00000353319 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
PTPN2-203ENST00000353319 A0A1B0GUL7 405 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 ITGA6P23229 1130 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 NEK4P51957 841 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 TAF7LQ5H9L4 462 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 LINC00116Q8NCU8 138 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 NHSQ6T4R5 1651 aa12.72□□□□□ -0.37
PTPN2-203ENST00000353319 AFF2P51816 1311 aa12.71□□□□□ -0.37
PTPN2-203ENST00000353319 NMIQ13287 307 aaPredicted RBP12.71□□□□□ -0.38
PTPN2-203ENST00000353319 NECTIN1Q15223 517 aa12.71□□□□□ -0.38
PTPN2-203ENST00000353319 KBTBD3Q8NAB2 608 aa12.71□□□□□ -0.38
PTPN2-203ENST00000353319 GREM2Q9H772 168 aa12.71□□□□□ -0.38
PTPN2-203ENST00000353319 CWC22Q9HCG8 908 aaKnown RBP12.71□□□□□ -0.38
PTPN2-203ENST00000353319 SNX14Q9Y5W7 946 aa12.71□□□□□ -0.38
PTPN2-203ENST00000353319 RTL9Q8NET4 1388 aa12.71□□□□□ -0.38
PTPN2-203ENST00000353319 MED23Q9ULK4 1368 aa12.71□□□□□ -0.38
PTPN2-203ENST00000353319 CCDC171Q6TFL3 1326 aa12.7□□□□□ -0.38
PTPN2-203ENST00000353319 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
PTPN2-203ENST00000353319 RPS6KA4O75676 772 aa12.7□□□□□ -0.38
PTPN2-203ENST00000353319 HSP90AA1P07900 732 aaKnown RBP12.7□□□□□ -0.38
PTPN2-203ENST00000353319 PTH1RQ03431 593 aa12.7□□□□□ -0.38
PTPN2-203ENST00000353319 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
PTPN2-203ENST00000353319 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
PTPN2-203ENST00000353319 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
PTPN2-203ENST00000353319 SPEF2Q9C093 1822 aa12.7□□□□□ -0.38
PTPN2-203ENST00000353319 BCORQ6W2J9 1755 aa12.7□□□□□ -0.38
PTPN2-203ENST00000353319 BTAF1O14981 1849 aa12.69□□□□□ -0.38
PTPN2-203ENST00000353319 NTSR2O95665 410 aa12.69□□□□□ -0.38
PTPN2-203ENST00000353319 CCDC158Q5M9N0 1113 aa12.69□□□□□ -0.38
PTPN2-203ENST00000353319 PTF1AQ7RTS3 328 aa12.69□□□□□ -0.38
PTPN2-203ENST00000353319 VGLL2Q8N8G2 317 aa12.69□□□□□ -0.38
PTPN2-203ENST00000353319 ZNF512BQ96KM6 892 aaPredicted RBP12.69□□□□□ -0.38
PTPN2-203ENST00000353319 NIP7Q9Y221 180 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTPN2-203ENST00000353319 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
PTPN2-203ENST00000353319 A0A0D9SFI3 127 aa12.68□□□□□ -0.38
PTPN2-203ENST00000353319 CUL4AQ13619 759 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms