RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PLCH2O75038 1416 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 TTC41PQ6P2S7 1318 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 FANCAO15360 1455 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 MAP2K7O14733 419 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 SGSM2O43147 1006 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 MNAT1P51948 309 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 DCTN1Q14203 1278 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 SLC4A10Q6U841 1118 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 EFCAB13Q8IY85 973 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 CCDC150Q8NCX0 1101 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 JAKMIP1Q96N16 626 aaKnown RBP15.42■□□□□ 0.06
IFT88-202ENST00000351808 SH2B1Q9NRF2 756 aaPredicted RBP15.42■□□□□ 0.06
IFT88-202ENST00000351808 AKAP2Q9Y2D5 859 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 FYB1O15117 783 aa15.41■□□□□ 0.06
IFT88-202ENST00000351808 EPB41L2O43491 1005 aaKnown RBP15.41■□□□□ 0.06
IFT88-202ENST00000351808 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
IFT88-202ENST00000351808 ERCC4Q92889 916 aaPredicted RBP15.41■□□□□ 0.06
IFT88-202ENST00000351808 ZSCAN31Q96LW9 406 aaPredicted RBP15.41■□□□□ 0.06
IFT88-202ENST00000351808 CCDC189A1A4V9 331 aa15.41■□□□□ 0.06
IFT88-202ENST00000351808 XPO4Q9C0E2 1151 aaKnown RBP15.41■□□□□ 0.06
IFT88-202ENST00000351808 INO80Q9ULG1 1556 aaPredicted RBP15.41■□□□□ 0.06
IFT88-202ENST00000351808 ZRSR1Q15695 479 aaKnown RBP15.4■□□□□ 0.06
IFT88-202ENST00000351808 PLEKHO1Q53GL0 409 aaPredicted RBP15.4■□□□□ 0.06
IFT88-202ENST00000351808 JPH4Q96JJ6 628 aa15.4■□□□□ 0.06
IFT88-202ENST00000351808 SRGAP3O43295 1099 aa15.4■□□□□ 0.06
IFT88-202ENST00000351808 NRDCO43847 1150 aa15.4■□□□□ 0.06
IFT88-202ENST00000351808 PPP2R3AQ06190 1150 aa15.4■□□□□ 0.06
IFT88-202ENST00000351808 IFNKQ9P0W0 207 aa15.4■□□□□ 0.06
IFT88-202ENST00000351808 STAP2Q9UGK3 403 aa15.4■□□□□ 0.06
IFT88-202ENST00000351808 KCNJ6P48051 423 aa15.39■□□□□ 0.05
IFT88-202ENST00000351808 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
IFT88-202ENST00000351808 LARP1Q6PKG0 1096 aaKnown RBP15.39■□□□□ 0.05
IFT88-202ENST00000351808 RSRC2Q7L4I2 434 aaKnown RBP15.39■□□□□ 0.05
IFT88-202ENST00000351808 A0A087WUV0 522 aaPredicted RBP15.39■□□□□ 0.05
IFT88-202ENST00000351808 PHACTR2O75167 634 aa15.39■□□□□ 0.05
IFT88-202ENST00000351808 KAT2BQ92831 832 aa15.39■□□□□ 0.05
IFT88-202ENST00000351808 IL1RAPL2Q9NP60 686 aa15.39■□□□□ 0.05
IFT88-202ENST00000351808 TPCN1Q9ULQ1 816 aa15.39■□□□□ 0.05
IFT88-202ENST00000351808 CEBPZQ03701 1054 aaKnown RBP15.38■□□□□ 0.05
IFT88-202ENST00000351808 SAFB2Q14151 953 aaKnown RBP eCLIP15.38■□□□□ 0.05
IFT88-202ENST00000351808 A0A1W2PP64 1363 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 ARHGAP5Q13017 1502 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 CCDC151A5D8V7 595 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 F6X3S4 739 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 PREX2Q70Z35 1606 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 NUTM1Q86Y26 1132 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 RABGGTAQ92696 567 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 ZSWIM4Q9H7M6 989 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 ANO10Q9NW15 660 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 QRICH2Q9H0J4 1663 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 PNMA6EA0A0J9YXQ4 647 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 PDCP20941 246 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 BICC1Q9H694 974 aaKnown RBP15.38■□□□□ 0.05
IFT88-202ENST00000351808 CYP46A1Q9Y6A2 500 aa15.38■□□□□ 0.05
IFT88-202ENST00000351808 TUBGCP6Q96RT7 1819 aa15.37■□□□□ 0.05
IFT88-202ENST00000351808 CHGAP10645 457 aaKnown RBP15.37■□□□□ 0.05
IFT88-202ENST00000351808 ISM2Q6H9L7 571 aa15.37■□□□□ 0.05
IFT88-202ENST00000351808 CEP57L1Q8IYX8 460 aa15.37■□□□□ 0.05
IFT88-202ENST00000351808 SUGCTQ9HAC7 445 aa15.37■□□□□ 0.05
IFT88-202ENST00000351808 UGGT1Q9NYU2 1555 aa15.37■□□□□ 0.05
IFT88-202ENST00000351808 MAP3K9P80192 1104 aa15.37■□□□□ 0.05
IFT88-202ENST00000351808 WWC2Q6AWC2 1192 aa15.37■□□□□ 0.05
IFT88-202ENST00000351808 PRPF40BQ6NWY9 871 aaKnown RBP15.37■□□□□ 0.05
IFT88-202ENST00000351808 CNNM3Q8NE01 707 aa15.37■□□□□ 0.05
IFT88-202ENST00000351808 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
IFT88-202ENST00000351808 PNPLA6Q8IY17 1366 aa15.36■□□□□ 0.05
IFT88-202ENST00000351808 CCP110O43303 1012 aa15.36■□□□□ 0.05
IFT88-202ENST00000351808 LIG3P49916 1009 aa15.36■□□□□ 0.05
IFT88-202ENST00000351808 WDR24Q96S15 920 aa15.36■□□□□ 0.05
IFT88-202ENST00000351808 HNRNPH1P31943 449 aaKnown RBP15.36■□□□□ 0.05
IFT88-202ENST00000351808 TXLNAP40222 546 aa15.36■□□□□ 0.05
IFT88-202ENST00000351808 ADCY9O60503 1353 aa15.36■□□□□ 0.05
IFT88-202ENST00000351808 PPFIA4O75335 1185 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 ERLIN2O94905 339 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 GNAI2P04899 355 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 GNG11P61952 73 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 BRD3Q15059 726 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 BEND6Q5SZJ8 279 aaPredicted RBP15.35■□□□□ 0.05
IFT88-202ENST00000351808 GOLGA1Q92805 767 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 ZSWIM6Q9HCJ5 1215 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 CTAGE5O15320 804 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 COL9A3Q14050 684 aaPredicted RBP15.35■□□□□ 0.05
IFT88-202ENST00000351808 PPP2R5AQ15172 486 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 HDXQ7Z353 690 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
IFT88-202ENST00000351808 DDX11Q96FC9 970 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 MRFAP1Q9Y605 127 aa15.35■□□□□ 0.05
IFT88-202ENST00000351808 PTH1RQ03431 593 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 JAKMIP3Q5VZ66 844 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 FBXW10Q5XX13 1052 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 RPAINQ86UA6 219 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 CCDC102AQ96A19 550 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 MPHOSPH8Q99549 860 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 GLI2P10070 1586 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 VWA3AA6NCI4 1184 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms