RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 SPC24Q8NBT2 197 aa22.7■■□□□ 1.22
RNF38-202ENST00000350199 MKNK2Q9HBH9 465 aa22.7■■□□□ 1.22
RNF38-202ENST00000350199 SOGA3Q5TF21 947 aa22.7■■□□□ 1.22
RNF38-202ENST00000350199 LRRC2Q9BYS8 371 aa22.7■■□□□ 1.22
RNF38-202ENST00000350199 ERVV-2B6SEH9 535 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 IPO7O95373 1038 aaKnown RBP22.69■■□□□ 1.22
RNF38-202ENST00000350199 SLC9C2Q5TAH2 1124 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 CLTCQ00610 1675 aaKnown RBP22.69■■□□□ 1.22
RNF38-202ENST00000350199 AOX1Q06278 1338 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 GOLGA8AA7E2F4 631 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 IQSEC3Q9UPP2 1182 aaPredicted RBP22.69■■□□□ 1.22
RNF38-202ENST00000350199 CCDC183Q5T5S1 534 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 DNAJC10Q8IXB1 793 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 NLRP3Q96P20 1036 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 ZNF287Q9HBT7 754 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 NEXMIFQ5QGS0 1516 aa22.69■■□□□ 1.22
RNF38-202ENST00000350199 HELBQ8NG08 1087 aaPredicted RBP22.68■■□□□ 1.22
RNF38-202ENST00000350199 EYA2O00167 538 aa22.68■■□□□ 1.22
RNF38-202ENST00000350199 MPNDQ8N594 471 aa22.68■■□□□ 1.22
RNF38-202ENST00000350199 PPFIA3O75145 1194 aa22.68■■□□□ 1.22
RNF38-202ENST00000350199 TNNI3KQ59H18 835 aa22.68■■□□□ 1.22
RNF38-202ENST00000350199 FPGT-TNNI3KV9GXZ4 949 aa22.68■■□□□ 1.22
RNF38-202ENST00000350199 MCM5P33992 734 aa22.67■■□□□ 1.22
RNF38-202ENST00000350199 TFIP11Q9UBB9 837 aaKnown RBP22.67■■□□□ 1.22
RNF38-202ENST00000350199 TIMM10P62072 90 aa22.67■■□□□ 1.22
RNF38-202ENST00000350199 TMEM67Q5HYA8 995 aa22.67■■□□□ 1.22
RNF38-202ENST00000350199 CREB3L3Q68CJ9 461 aa22.67■■□□□ 1.22
RNF38-202ENST00000350199 PDILTQ8N807 584 aa22.67■■□□□ 1.22
RNF38-202ENST00000350199 RAD50Q92878 1312 aa22.67■■□□□ 1.22
RNF38-202ENST00000350199 C6orf229H3BNL8 230 aa22.67■■□□□ 1.22
RNF38-202ENST00000350199 PRIM1P49642 420 aaKnown RBP22.67■■□□□ 1.22
RNF38-202ENST00000350199 NEURL1BA8MQ27 555 aa22.66■■□□□ 1.22
RNF38-202ENST00000350199 RNF113AO15541 343 aaKnown RBP22.66■■□□□ 1.22
RNF38-202ENST00000350199 BEND3Q5T5X7 828 aa22.66■■□□□ 1.22
RNF38-202ENST00000350199 RAB11FIP4Q86YS3 637 aa22.66■■□□□ 1.22
RNF38-202ENST00000350199 SSH3Q8TE77 659 aa22.66■■□□□ 1.22
RNF38-202ENST00000350199 CDK5RAP3Q96JB5 506 aa22.66■■□□□ 1.22
RNF38-202ENST00000350199 MFSD6Q6ZSS7 791 aa22.66■■□□□ 1.22
RNF38-202ENST00000350199 CCAR2Q8N163 923 aaKnown RBP22.66■■□□□ 1.22
RNF38-202ENST00000350199 ZSCAN22P10073 491 aaPredicted RBP22.66■■□□□ 1.22
RNF38-202ENST00000350199 CTCFLQ8NI51 663 aaPredicted RBP22.66■■□□□ 1.22
RNF38-202ENST00000350199 AK2P54819 239 aa22.66■■□□□ 1.22
RNF38-202ENST00000350199 CCDC43Q96MW1 224 aaKnown RBP22.66■■□□□ 1.22
RNF38-202ENST00000350199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.66■■□□□ 1.22
RNF38-202ENST00000350199 KLHL40Q2TBA0 621 aa22.65■■□□□ 1.22
RNF38-202ENST00000350199 DBNDD2Q9BQY9 259 aa22.65■■□□□ 1.22
RNF38-202ENST00000350199 MICU3Q86XE3 530 aa22.65■■□□□ 1.22
RNF38-202ENST00000350199 CEP57L1Q8IYX8 460 aa22.65■■□□□ 1.22
RNF38-202ENST00000350199 ERBB3P21860 1342 aa22.65■■□□□ 1.22
RNF38-202ENST00000350199 KDRP35968 1356 aa22.65■■□□□ 1.22
RNF38-202ENST00000350199 PTPRMP28827 1452 aa22.65■■□□□ 1.22
RNF38-202ENST00000350199 CCDC171Q6TFL3 1326 aa22.64■■□□□ 1.22
RNF38-202ENST00000350199 CCDC144CPQ8IYA2 1237 aa22.64■■□□□ 1.22
RNF38-202ENST00000350199 ZGPATQ8N5A5 531 aaKnown RBP22.64■■□□□ 1.22
RNF38-202ENST00000350199 ORC3Q9UBD5 711 aaPredicted RBP22.64■■□□□ 1.22
RNF38-202ENST00000350199 A0A1B0GUL7 405 aa22.64■■□□□ 1.21
RNF38-202ENST00000350199 Q6ZUG5 572 aa22.64■■□□□ 1.21
RNF38-202ENST00000350199 GSPT1P15170 499 aaKnown RBP22.63■■□□□ 1.21
RNF38-202ENST00000350199 SSRP1Q08945 709 aaKnown RBP22.63■■□□□ 1.21
RNF38-202ENST00000350199 ZNF594Q96JF6 807 aaPredicted RBP22.63■■□□□ 1.21
RNF38-202ENST00000350199 ARHGEF40Q8TER5 1519 aa22.63■■□□□ 1.21
RNF38-202ENST00000350199 MED14O60244 1454 aa22.63■■□□□ 1.21
RNF38-202ENST00000350199 CYP7A1P22680 504 aa22.63■■□□□ 1.21
RNF38-202ENST00000350199 KLF18A0A0U1RQI7 1052 aa22.63■■□□□ 1.21
RNF38-202ENST00000350199 PNPLA6Q8IY17 1366 aa22.63■■□□□ 1.21
RNF38-202ENST00000350199 METAP2P50579 478 aaKnown RBP eCLIP22.62■■□□□ 1.21
RNF38-202ENST00000350199 ZNF444Q8N0Y2 327 aaPredicted RBP22.62■■□□□ 1.21
RNF38-202ENST00000350199 RTCBQ9Y3I0 505 aaKnown RBP22.62■■□□□ 1.21
RNF38-202ENST00000350199 AGLP35573 1532 aa22.62■■□□□ 1.21
RNF38-202ENST00000350199 ITGA6P23229 1130 aa22.62■■□□□ 1.21
RNF38-202ENST00000350199 IARSP41252 1262 aaKnown RBP22.62■■□□□ 1.21
RNF38-202ENST00000350199 RAB3GAP1Q15042 981 aa22.62■■□□□ 1.21
RNF38-202ENST00000350199 CEP131Q9UPN4 1083 aa22.62■■□□□ 1.21
RNF38-202ENST00000350199 SERPINC1P01008 464 aa22.61■■□□□ 1.21
RNF38-202ENST00000350199 NYXQ9GZU5 481 aa22.61■■□□□ 1.21
RNF38-202ENST00000350199 ST5P78524 1137 aa22.61■■□□□ 1.21
RNF38-202ENST00000350199 PROSER3Q2NL68 480 aa22.61■■□□□ 1.21
RNF38-202ENST00000350199 TPTE2Q6XPS3 522 aa22.61■■□□□ 1.21
RNF38-202ENST00000350199 CATIPQ7Z7H3 387 aa22.61■■□□□ 1.21
RNF38-202ENST00000350199 R3HCC1Q9Y3T6 440 aaKnown RBP22.61■■□□□ 1.21
RNF38-202ENST00000350199 SPTY2D1Q68D10 685 aaPredicted RBP22.61■■□□□ 1.21
RNF38-202ENST00000350199 SGSM2O43147 1006 aa22.61■■□□□ 1.21
RNF38-202ENST00000350199 LDHCP07864 332 aa22.61■■□□□ 1.21
RNF38-202ENST00000350199 RBM27Q9P2N5 1060 aaKnown RBP22.61■■□□□ 1.21
RNF38-202ENST00000350199 SLF2Q8IX21 1173 aa22.6■■□□□ 1.21
RNF38-202ENST00000350199 DACH1Q9UI36 760 aa22.6■■□□□ 1.21
RNF38-202ENST00000350199 SLC4A4Q9Y6R1 1079 aa22.6■■□□□ 1.21
RNF38-202ENST00000350199 SH3TC1Q8TE82 1336 aa22.6■■□□□ 1.21
RNF38-202ENST00000350199 PIK3C2BO00750 1634 aa22.6■■□□□ 1.21
RNF38-202ENST00000350199 FILIP1LQ4L180 1135 aa22.59■■□□□ 1.21
RNF38-202ENST00000350199 RUFY3Q7L099 469 aa22.59■■□□□ 1.21
RNF38-202ENST00000350199 HCLS1P14317 486 aaPredicted RBP22.59■■□□□ 1.21
RNF38-202ENST00000350199 BAG3O95817 575 aa22.59■■□□□ 1.21
RNF38-202ENST00000350199 UBE2HP62256 183 aa22.59■■□□□ 1.21
RNF38-202ENST00000350199 CDC42BPGQ6DT37 1551 aa22.59■■□□□ 1.21
RNF38-202ENST00000350199 MPHOSPH10O00566 681 aaKnown RBP22.59■■□□□ 1.21
RNF38-202ENST00000350199 CPA1P15085 419 aa22.59■■□□□ 1.21
RNF38-202ENST00000350199 INTS4Q96HW7 963 aaKnown RBP22.58■■□□□ 1.21
RNF38-202ENST00000350199 PARP10Q53GL7 1025 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms