RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 FBXL21Q9UKT6 434 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 RNASE9P60153 205 aaKnown RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 CALD1Q05682 793 aaKnown RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 FKBP5Q13451 457 aaPredicted RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 PLCB4Q15147 1175 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 ANKRD42Q8N9B4 389 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 CDC5LQ99459 802 aaKnown RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 EVLQ9UI08 416 aaPredicted RBP7.01□□□□□ -1.29
RFC1-201ENST00000349703 TSKSQ9UJT2 592 aa7.01□□□□□ -1.29
RFC1-201ENST00000349703 IL33O95760 270 aa7□□□□□ -1.29
RFC1-201ENST00000349703 NAT2P11245 290 aa7□□□□□ -1.29
RFC1-201ENST00000349703 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
RFC1-201ENST00000349703 CASC1Q6TDU7 716 aa7□□□□□ -1.29
RFC1-201ENST00000349703 TMCO5AQ8N6Q1 288 aa7□□□□□ -1.29
RFC1-201ENST00000349703 PARP2Q9UGN5 583 aa7□□□□□ -1.29
RFC1-201ENST00000349703 KCNG1Q9UIX4 513 aa7□□□□□ -1.29
RFC1-201ENST00000349703 PPME1Q9Y570 386 aa7□□□□□ -1.29
RFC1-201ENST00000349703 MAFBQ9Y5Q3 323 aaPredicted RBP7□□□□□ -1.29
RFC1-201ENST00000349703 INSRP06213 1382 aa7□□□□□ -1.29
RFC1-201ENST00000349703 SATB1Q01826 763 aa7□□□□□ -1.29
RFC1-201ENST00000349703 CLEC16AQ2KHT3 1053 aa7□□□□□ -1.29
RFC1-201ENST00000349703 MICALL2Q8IY33 904 aa7□□□□□ -1.29
RFC1-201ENST00000349703 KCNB2Q92953 911 aa7□□□□□ -1.29
RFC1-201ENST00000349703 CEP63Q96MT8 703 aa7□□□□□ -1.29
RFC1-201ENST00000349703 UIMC1Q96RL1 719 aa7□□□□□ -1.29
RFC1-201ENST00000349703 DNAI2Q9GZS0 605 aa7□□□□□ -1.29
RFC1-201ENST00000349703 FANCLQ9NW38 375 aa7□□□□□ -1.29
RFC1-201ENST00000349703 KLHL3Q9UH77 587 aa7□□□□□ -1.29
RFC1-201ENST00000349703 SAP30BPQ9UHR5 308 aaKnown RBP7□□□□□ -1.29
RFC1-201ENST00000349703 APOL3O95236 402 aa7□□□□□ -1.29
RFC1-201ENST00000349703 KCNH2Q12809 1159 aa7□□□□□ -1.29
RFC1-201ENST00000349703 TRIM14Q14142 442 aa7□□□□□ -1.29
RFC1-201ENST00000349703 GK5Q6ZS86 529 aa7□□□□□ -1.29
RFC1-201ENST00000349703 DCAF11Q8TEB1 546 aa7□□□□□ -1.29
RFC1-201ENST00000349703 CDCA7LQ96GN5 454 aa7□□□□□ -1.29
RFC1-201ENST00000349703 CFDP1Q9UEE9 299 aaPredicted RBP7□□□□□ -1.29
RFC1-201ENST00000349703 ROCK1Q13464 1354 aa7□□□□□ -1.29
RFC1-201ENST00000349703 MYL1P05976 194 aa7□□□□□ -1.29
RFC1-201ENST00000349703 PWP1Q13610 501 aa7□□□□□ -1.29
RFC1-201ENST00000349703 UBE2R2Q712K3 238 aaPredicted RBP7□□□□□ -1.29
RFC1-201ENST00000349703 NOP9Q86U38 636 aaKnown RBP7□□□□□ -1.29
RFC1-201ENST00000349703 SYAP1Q96A49 352 aaPredicted RBP7□□□□□ -1.29
RFC1-201ENST00000349703 GOPCQ9HD26 462 aa7□□□□□ -1.29
RFC1-201ENST00000349703 IFT57Q9NWB7 429 aa7□□□□□ -1.29
RFC1-201ENST00000349703 MKS1Q9NXB0 559 aa7□□□□□ -1.29
RFC1-201ENST00000349703 PLEKHD1A6NEE1 506 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 LMAN1P49257 510 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 P3H1Q32P28 736 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 USHBP1Q8N6Y0 703 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 THOC2Q8NI27 1593 aaKnown RBP6.99□□□□□ -1.29
RFC1-201ENST00000349703 KRT9P35527 623 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 STRN3Q13033 797 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 NBPF8Q3BBV2 869 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 PHACTR4Q8IZ21 702 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 EHBP1Q8NDI1 1231 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 CCNL1Q9UK58 526 aaPredicted RBP6.99□□□□□ -1.29
RFC1-201ENST00000349703 PCDHB15Q9Y5E8 787 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 ANO4Q32M45 955 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 ANKS3Q6ZW76 656 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 METTL3Q86U44 580 aaKnown RBP6.99□□□□□ -1.29
RFC1-201ENST00000349703 CPXCR1Q8N123 301 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 CFAP53Q96M91 514 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 GBP5Q96PP8 586 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 F5H423 210 aaPredicted RBP6.99□□□□□ -1.29
RFC1-201ENST00000349703 TLR1Q15399 786 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 CFAP100Q494V2 611 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 ALG1LQ6GMV1 187 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 RIPOR1Q6ZS17 1223 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 RGL4Q8IZJ4 473 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 CCDC33Q8N5R6 958 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 NAT16Q8N8M0 369 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 ANKK1Q8NFD2 765 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 KLHL42Q9P2K6 505 aa6.99□□□□□ -1.29
RFC1-201ENST00000349703 ST20-MTHFSA0A0A6YYL1 179 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 NUDT7P0C024 238 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 COPS2P61201 443 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 TRIM29Q14134 588 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 ZSCAN30Q86W11 494 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 CCDC125Q86Z20 511 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 DDX11Q96FC9 970 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 ACBD3Q9H3P7 528 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 EFR3BQ9Y2G0 817 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 ANKRD30BQ9BXX2 1392 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 CREB3O43889 395 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 CAND2O75155 1236 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 ARL4DP49703 201 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 SSRP1Q08945 709 aaKnown RBP6.98□□□□□ -1.29
RFC1-201ENST00000349703 TAF3Q5VWG9 929 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 PSDA5PKW4 1024 aaPredicted RBP6.98□□□□□ -1.29
RFC1-201ENST00000349703 SLMAPQ14BN4 828 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 TBCELQ5QJ74 424 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 APBB1IPQ7Z5R6 666 aaPredicted RBP6.98□□□□□ -1.29
RFC1-201ENST00000349703 RHPN1Q8TCX5 695 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 ELMO3Q96BJ8 720 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 RRAGDQ9NQL2 400 aaPredicted RBP6.98□□□□□ -1.29
RFC1-201ENST00000349703 MAGEC2Q9UBF1 373 aaPredicted RBP6.98□□□□□ -1.29
RFC1-201ENST00000349703 CCDC39Q9UFE4 941 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 FCGRTP55899 365 aa6.98□□□□□ -1.29
RFC1-201ENST00000349703 LRPPRCP42704 1394 aaKnown RBP6.97□□□□□ -1.29
RFC1-201ENST00000349703 TERF1P54274 439 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms