RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
SMG7-201ENST00000347615 SOGA3Q5TF21 947 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 NFATC2IPQ8NCF5 419 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 PRIMPOLQ96LW4 560 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 ZKSCAN3Q9BRR0 538 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 NBPF7P0C2Y1 421 aaPredicted RBP12.12□□□□□ -0.47
SMG7-201ENST00000347615 SYKP43405 635 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 MCM6Q14566 821 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
SMG7-201ENST00000347615 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 IGHMBP2P38935 993 aaKnown RBP12.12□□□□□ -0.47
SMG7-201ENST00000347615 JAKMIP3Q5VZ66 844 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 IFNKQ9P0W0 207 aa12.12□□□□□ -0.47
SMG7-201ENST00000347615 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMG7-201ENST00000347615 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
SMG7-201ENST00000347615 UBA5Q9GZZ9 404 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 PHACTR2O75167 634 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 ALG1Q9BT22 464 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 AKAP2Q9Y2D5 859 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 HMGB1P09429 215 aaKnown RBP12.11□□□□□ -0.47
SMG7-201ENST00000347615 RDXP35241 583 aaKnown RBP12.11□□□□□ -0.47
SMG7-201ENST00000347615 NLRP5P59047 1200 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 CDC37L1Q7L3B6 337 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 IL13P35225 146 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 PLCH2O75038 1416 aa12.11□□□□□ -0.47
SMG7-201ENST00000347615 UHRF1BP1Q6BDS2 1440 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 CTAGE5O15320 804 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 TIMM10P62072 90 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 AMOTQ4VCS5 1084 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
SMG7-201ENST00000347615 PLIN2Q99541 437 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 PUF60Q9UHX1 559 aaKnown RBP12.1□□□□□ -0.47
SMG7-201ENST00000347615 FAM170AA1A519 330 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 FAM107BQ9H098 131 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 LZTFL1Q9NQ48 299 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 JAK2O60674 1132 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 MCMDC2Q4G0Z9 681 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 NUP160Q12769 1436 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 USP19O94966 1318 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
SMG7-201ENST00000347615 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
SMG7-201ENST00000347615 A0A087WWV3 80 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 CCDC148Q8NFR7 591 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMG7-201ENST00000347615 KIAA0754O94854 1291 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 ANAPC15P60006 121 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 KRT28Q7Z3Y7 464 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 NCOA7Q8NI08 942 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 CCDC113Q9H0I3 377 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 MKNK2Q9HBH9 465 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 ABCC1P33527 1531 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 ABCC10Q5T3U5 1492 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 GOLGA6L10A6NI86 522 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 STARD3NLO95772 234 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 WASF1Q92558 559 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 RTL1A6NKG5 1358 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
SMG7-201ENST00000347615 MAP3K19Q56UN5 1328 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 ADAMTS2O95450 1211 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 MIGA1Q8NAN2 632 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 MRPS27Q92552 414 aaKnown RBP12.09□□□□□ -0.47
SMG7-201ENST00000347615 ZNF594Q96JF6 807 aaPredicted RBP12.09□□□□□ -0.47
SMG7-201ENST00000347615 RIMS2Q9UQ26 1411 aa12.09□□□□□ -0.47
SMG7-201ENST00000347615 PIP4K2BP78356 416 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 MAP3K12Q12852 859 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 FKBP15Q5T1M5 1219 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 CCDC94Q9BW85 323 aaPredicted RBP12.08□□□□□ -0.48
SMG7-201ENST00000347615 PTPN21Q16825 1174 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 TDRD12Q587J7 1177 aaKnown RBP12.08□□□□□ -0.48
SMG7-201ENST00000347615 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 CEP131Q9UPN4 1083 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 PRC1O43663 620 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 DHX58Q96C10 678 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 UTP14AQ9BVJ6 771 aaKnown RBP12.08□□□□□ -0.48
SMG7-201ENST00000347615 KAT6BQ8WYB5 2073 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 ANKRD18BA2A2Z9 1011 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 GSDMDP57764 484 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 SPTY2D1Q68D10 685 aaPredicted RBP12.08□□□□□ -0.48
SMG7-201ENST00000347615 CAPZA3Q96KX2 299 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 JADE2Q9NQC1 790 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 PAG1Q9NWQ8 432 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 ARHGEF12Q9NZN5 1544 aa12.08□□□□□ -0.48
SMG7-201ENST00000347615 PAXBP1Q9Y5B6 917 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 CDR1P51861 262 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 SLC9C2Q5TAH2 1124 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 EIF2AK4Q9P2K8 1649 aaKnown RBP12.07□□□□□ -0.48
SMG7-201ENST00000347615 SLC27A2O14975 620 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 KCNQ3O43525 872 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 ZSCAN16Q9H4T2 348 aaPredicted RBP12.07□□□□□ -0.48
SMG7-201ENST00000347615 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
SMG7-201ENST00000347615 NSFL1CQ9UNZ2 370 aaKnown RBP12.07□□□□□ -0.48
SMG7-201ENST00000347615 IDEP14735 1019 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 LRMPQ12912 555 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms