RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CHMP3Q9Y3E7 222 aa13.51□□□□□ -0.25
ECM1-201ENST00000346569 BCORQ6W2J9 1755 aa13.5□□□□□ -0.25
ECM1-201ENST00000346569 EYA2O00167 538 aa13.5□□□□□ -0.25
ECM1-201ENST00000346569 HCLS1P14317 486 aaPredicted RBP13.5□□□□□ -0.25
ECM1-201ENST00000346569 SDSP20132 328 aa13.5□□□□□ -0.25
ECM1-201ENST00000346569 RFC4P35249 363 aa13.5□□□□□ -0.25
ECM1-201ENST00000346569 IL15P40933 162 aaPredicted RBP13.5□□□□□ -0.25
ECM1-201ENST00000346569 BAG6P46379 1132 aa13.5□□□□□ -0.25
ECM1-201ENST00000346569 ZNF594Q96JF6 807 aaPredicted RBP13.5□□□□□ -0.25
ECM1-201ENST00000346569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
ECM1-201ENST00000346569 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
ECM1-201ENST00000346569 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
ECM1-201ENST00000346569 TFCP2Q12800 502 aa13.49□□□□□ -0.25
ECM1-201ENST00000346569 IFIT5Q13325 482 aaKnown RBP13.49□□□□□ -0.25
ECM1-201ENST00000346569 LRRC24Q50LG9 513 aa13.49□□□□□ -0.25
ECM1-201ENST00000346569 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
ECM1-201ENST00000346569 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
ECM1-201ENST00000346569 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
ECM1-201ENST00000346569 PUS3Q9BZE2 481 aaKnown RBP13.49□□□□□ -0.25
ECM1-201ENST00000346569 GREM2Q9H772 168 aa13.49□□□□□ -0.25
ECM1-201ENST00000346569 GPR108Q9NPR9 543 aa13.49□□□□□ -0.25
ECM1-201ENST00000346569 ITGA6P23229 1130 aa13.48□□□□□ -0.25
ECM1-201ENST00000346569 RIPOR2Q9Y4F9 1068 aa13.48□□□□□ -0.25
ECM1-201ENST00000346569 TTC41PQ6P2S7 1318 aa13.48□□□□□ -0.25
ECM1-201ENST00000346569 ANKRD18BA2A2Z9 1011 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 PHF14O94880 888 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
ECM1-201ENST00000346569 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
ECM1-201ENST00000346569 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 AACSQ86V21 672 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
ECM1-201ENST00000346569 CCDC8Q9H0W5 538 aaPredicted RBP13.47□□□□□ -0.25
ECM1-201ENST00000346569 GYS1P13807 737 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 TM4SF1P30408 202 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
ECM1-201ENST00000346569 ERFEQ4G0M1 354 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 BICDL1Q6ZP65 573 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 CAMKK2Q96RR4 588 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 NYXQ9GZU5 481 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
ECM1-201ENST00000346569 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.25
ECM1-201ENST00000346569 SCN7AQ01118 1682 aa13.46□□□□□ -0.26
ECM1-201ENST00000346569 LRP5O75197 1615 aa13.46□□□□□ -0.26
ECM1-201ENST00000346569 NFIXQ14938 502 aa13.46□□□□□ -0.26
ECM1-201ENST00000346569 ZNF827Q17R98 1081 aa13.46□□□□□ -0.26
ECM1-201ENST00000346569 TPTE2Q6XPS3 522 aa13.46□□□□□ -0.26
ECM1-201ENST00000346569 CEP126Q9P2H0 1117 aa13.46□□□□□ -0.26
ECM1-201ENST00000346569 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
ECM1-201ENST00000346569 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
ECM1-201ENST00000346569 CDC45O75419 566 aa13.45□□□□□ -0.26
ECM1-201ENST00000346569 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
ECM1-201ENST00000346569 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
ECM1-201ENST00000346569 LDHAL6AQ6ZMR3 332 aa13.45□□□□□ -0.26
ECM1-201ENST00000346569 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
ECM1-201ENST00000346569 TLR7Q9NYK1 1049 aaKnown RBP13.45□□□□□ -0.26
ECM1-201ENST00000346569 ERC2O15083 957 aa13.44□□□□□ -0.26
ECM1-201ENST00000346569 TIMM10P62072 90 aa13.44□□□□□ -0.26
ECM1-201ENST00000346569 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
ECM1-201ENST00000346569 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
ECM1-201ENST00000346569 DBNLQ9UJU6 430 aaKnown RBP13.44□□□□□ -0.26
ECM1-201ENST00000346569 ATP5JP18859 108 aa13.43□□□□□ -0.26
ECM1-201ENST00000346569 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
ECM1-201ENST00000346569 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
ECM1-201ENST00000346569 COL23A1Q86Y22 540 aaPredicted RBP13.43□□□□□ -0.26
ECM1-201ENST00000346569 VGLL2Q8N8G2 317 aa13.43□□□□□ -0.26
ECM1-201ENST00000346569 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
ECM1-201ENST00000346569 TFCP2L1Q9NZI6 479 aa13.43□□□□□ -0.26
ECM1-201ENST00000346569 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
ECM1-201ENST00000346569 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
ECM1-201ENST00000346569 MYH3P11055 1940 aa13.42□□□□□ -0.26
ECM1-201ENST00000346569 GTF2E1P29083 439 aaPredicted RBP13.42□□□□□ -0.26
ECM1-201ENST00000346569 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
ECM1-201ENST00000346569 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
ECM1-201ENST00000346569 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
ECM1-201ENST00000346569 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
ECM1-201ENST00000346569 ABCC12Q96J65 1359 aa13.42□□□□□ -0.26
ECM1-201ENST00000346569 A0A1B0GUL7 405 aa13.41□□□□□ -0.26
ECM1-201ENST00000346569 CHMLP26374 656 aa13.41□□□□□ -0.26
ECM1-201ENST00000346569 RILPL2Q969X0 211 aa13.41□□□□□ -0.26
ECM1-201ENST00000346569 CNNM1Q9NRU3 951 aa13.41□□□□□ -0.26
ECM1-201ENST00000346569 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
ECM1-201ENST00000346569 COL24A1Q17RW2 1714 aa13.41□□□□□ -0.26
ECM1-201ENST00000346569 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
ECM1-201ENST00000346569 PDE8BO95263 885 aa13.4□□□□□ -0.26
ECM1-201ENST00000346569 SERPINB2P05120 415 aa13.4□□□□□ -0.26
ECM1-201ENST00000346569 NLGN1Q8N2Q7 840 aa13.4□□□□□ -0.26
ECM1-201ENST00000346569 TBC1D32Q96NH3 1257 aa13.4□□□□□ -0.26
ECM1-201ENST00000346569 NEUROD6Q96NK8 337 aa13.4□□□□□ -0.26
ECM1-201ENST00000346569 TUBGCP6Q96RT7 1819 aa13.4□□□□□ -0.27
ECM1-201ENST00000346569 EIF5BO60841 1220 aaKnown RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 MAP4K4O95819 1239 aaPredicted RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 FGFR2P21802 821 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 MFAP1P55081 439 aaKnown RBP13.39□□□□□ -0.27
ECM1-201ENST00000346569 METTL24Q5JXM2 366 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 PRR5LQ6MZQ0 368 aa13.39□□□□□ -0.27
ECM1-201ENST00000346569 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms