RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RHPN1Q8TCX5 695 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 PRDM15P57071 1507 aaPredicted RBP12.65□□□□□ -0.38
CLCN6-202ENST00000346436 USP48Q86UV5 1035 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 ZSCAN31Q96LW9 406 aaPredicted RBP12.65□□□□□ -0.38
CLCN6-202ENST00000346436 TRPM2O94759 1503 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 CPA1P15085 419 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
CLCN6-202ENST00000346436 CNBD1Q8NA66 436 aa12.64□□□□□ -0.39
CLCN6-202ENST00000346436 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
CLCN6-202ENST00000346436 ADCY5O95622 1261 aa12.64□□□□□ -0.39
CLCN6-202ENST00000346436 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
CLCN6-202ENST00000346436 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
CLCN6-202ENST00000346436 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
CLCN6-202ENST00000346436 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
CLCN6-202ENST00000346436 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
CLCN6-202ENST00000346436 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
CLCN6-202ENST00000346436 PHAXQ9H814 394 aaKnown RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 MAP7D2Q96T17 732 aa12.63□□□□□ -0.39
CLCN6-202ENST00000346436 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 PKNOX2Q96KN3 472 aa12.63□□□□□ -0.39
CLCN6-202ENST00000346436 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 DACH1Q9UI36 760 aa12.63□□□□□ -0.39
CLCN6-202ENST00000346436 NPATQ14207 1427 aa12.63□□□□□ -0.39
CLCN6-202ENST00000346436 CD2BP2O95400 341 aaKnown RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 FAM98CQ17RN3 349 aaKnown RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
CLCN6-202ENST00000346436 FERMT2Q96AC1 680 aa12.63□□□□□ -0.39
CLCN6-202ENST00000346436 YEATS2Q9ULM3 1422 aa12.63□□□□□ -0.39
CLCN6-202ENST00000346436 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 TMEM266Q2M3C6 531 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 ATP8B2P98198 1209 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 PKP1Q13835 747 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 RBSNQ9H1K0 784 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 ECHDC1Q9NTX5 307 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 SYNMO15061 1565 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 LPXNO60711 386 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 KIF5BP33176 963 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 CCT2P78371 535 aaKnown RBP12.62□□□□□ -0.39
CLCN6-202ENST00000346436 TTLL5Q6EMB2 1281 aa12.62□□□□□ -0.39
CLCN6-202ENST00000346436 PUS7Q96PZ0 661 aaKnown RBP12.62□□□□□ -0.39
CLCN6-202ENST00000346436 ATP5J2-PTCD1G3V325 749 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-202ENST00000346436 SMARCE1Q969G3 411 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 EYA1Q99502 592 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 NOD1Q9Y239 953 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 RANBP6O60518 1105 aaKnown RBP12.61□□□□□ -0.39
CLCN6-202ENST00000346436 H7C1D1 291 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 GPS2Q13227 327 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
CLCN6-202ENST00000346436 TRPM1Q7Z4N2 1603 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 KIF20AO95235 890 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 RAB11FIP4Q86YS3 637 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 MNS1Q8NEH6 495 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 USP19O94966 1318 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 CHMLP26374 656 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 CBX1P83916 185 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 CCDC97Q96F63 343 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-202ENST00000346436 DCAF5Q96JK2 942 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 MAST3O60307 1309 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 PIK3R4Q99570 1358 aa12.6□□□□□ -0.39
CLCN6-202ENST00000346436 ZSCAN22P10073 491 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-202ENST00000346436 DNM1Q05193 864 aaKnown RBP12.6□□□□□ -0.39
CLCN6-202ENST00000346436 TTC12Q9H892 705 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-202ENST00000346436 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
CLCN6-202ENST00000346436 EAPPQ56P03 285 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-202ENST00000346436 MTERF4Q7Z6M4 381 aaKnown RBP12.59□□□□□ -0.39
CLCN6-202ENST00000346436 ZNHIT6Q9NWK9 470 aaKnown RBP12.59□□□□□ -0.39
CLCN6-202ENST00000346436 PNMA6EA0A0J9YXQ4 647 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 KIF4AO95239 1232 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 GAS2L3Q86XJ1 694 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 ZFYVE9O95405 1425 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 CCDC112Q8NEF3 446 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 AK2P54819 239 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 SLC39A6Q13433 755 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 FAM196AQ6ZSG2 479 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 STXBP4Q6ZWJ1 553 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 PDIA4P13667 645 aaKnown RBP12.59□□□□□ -0.39
CLCN6-202ENST00000346436 ALDH1B1P30837 517 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 CWF19L2Q2TBE0 894 aaKnown RBP12.59□□□□□ -0.39
CLCN6-202ENST00000346436 TANGO6Q9C0B7 1094 aa12.59□□□□□ -0.39
CLCN6-202ENST00000346436 SLC5A4Q9NY91 659 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms