RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 ALDH1B1P30837 517 aa29.54■■■□□ 2.32
MADCAM1-202ENST00000346144 SLX4Q8IY92 1834 aa29.54■■■□□ 2.32
MADCAM1-202ENST00000346144 CRAMP1Q96RY5 1269 aa29.53■■■□□ 2.32
MADCAM1-202ENST00000346144 CCDC152Q4G0S7 254 aa29.52■■■□□ 2.32
MADCAM1-202ENST00000346144 BCS1LQ9Y276 419 aa29.52■■■□□ 2.32
MADCAM1-202ENST00000346144 TAF1P21675 1872 aa29.52■■■□□ 2.32
MADCAM1-202ENST00000346144 PRPF40BQ6NWY9 871 aaKnown RBP29.51■■■□□ 2.32
MADCAM1-202ENST00000346144 DDX46Q7L014 1031 aaKnown RBP29.51■■■□□ 2.32
MADCAM1-202ENST00000346144 TTLL11Q8NHH1 800 aa29.51■■■□□ 2.32
MADCAM1-202ENST00000346144 PANK1Q8TE04 598 aa29.51■■■□□ 2.32
MADCAM1-202ENST00000346144 SUCLG2Q96I99 432 aa29.51■■■□□ 2.32
MADCAM1-202ENST00000346144 YBX3P16989 372 aaKnown RBP eCLIP29.5■■■□□ 2.31
MADCAM1-202ENST00000346144 FOXO4P98177 505 aa29.5■■■□□ 2.31
MADCAM1-202ENST00000346144 PELP1Q8IZL8 1130 aaKnown RBP29.5■■■□□ 2.31
MADCAM1-202ENST00000346144 RTL9Q8NET4 1388 aa29.5■■■□□ 2.31
MADCAM1-202ENST00000346144 GOLGB1Q14789 3259 aaKnown RBP29.49■■■□□ 2.31
MADCAM1-202ENST00000346144 CSF1RP07333 972 aa29.49■■■□□ 2.31
MADCAM1-202ENST00000346144 UBTFL1P0CB47 393 aaPredicted RBP29.49■■■□□ 2.31
MADCAM1-202ENST00000346144 PDE3AQ14432 1141 aa29.49■■■□□ 2.31
MADCAM1-202ENST00000346144 GPR162Q16538 588 aa29.49■■■□□ 2.31
MADCAM1-202ENST00000346144 MEIS3Q99687 375 aa29.49■■■□□ 2.31
MADCAM1-202ENST00000346144 EPHA10Q5JZY3 1008 aa29.48■■■□□ 2.31
MADCAM1-202ENST00000346144 ITPRIPQ8IWB1 547 aa29.48■■■□□ 2.31
MADCAM1-202ENST00000346144 KAZALD1Q96I82 304 aa29.48■■■□□ 2.31
MADCAM1-202ENST00000346144 GNAI3P08754 354 aa29.47■■■□□ 2.31
MADCAM1-202ENST00000346144 RRP1P56182 461 aaKnown RBP29.47■■■□□ 2.31
MADCAM1-202ENST00000346144 HDAC5Q9UQL6 1122 aa29.47■■■□□ 2.31
MADCAM1-202ENST00000346144 GRAPQ13588 217 aa29.46■■■□□ 2.31
MADCAM1-202ENST00000346144 GRAPLQ8TC17 118 aaPredicted RBP29.46■■■□□ 2.31
MADCAM1-202ENST00000346144 CCDC85AQ96PX6 553 aaPredicted RBP29.46■■■□□ 2.31
MADCAM1-202ENST00000346144 COL4A1P02462 1669 aa29.46■■■□□ 2.31
MADCAM1-202ENST00000346144 DCAF8L1A6NGE4 600 aa29.45■■■□□ 2.31
MADCAM1-202ENST00000346144 GREM2Q9H772 168 aa29.45■■■□□ 2.31
MADCAM1-202ENST00000346144 LMBR1LQ6UX01 489 aa29.45■■■□□ 2.3
MADCAM1-202ENST00000346144 BICC1Q9H694 974 aaKnown RBP29.45■■■□□ 2.3
MADCAM1-202ENST00000346144 SEC31BQ9NQW1 1179 aa29.45■■■□□ 2.3
MADCAM1-202ENST00000346144 BBOX1O75936 387 aa29.44■■■□□ 2.3
MADCAM1-202ENST00000346144 MVPQ14764 893 aaKnown RBP29.44■■■□□ 2.3
MADCAM1-202ENST00000346144 FAM161AQ3B820 660 aa29.44■■■□□ 2.3
MADCAM1-202ENST00000346144 RABL6Q3YEC7 729 aaPredicted RBP29.44■■■□□ 2.3
MADCAM1-202ENST00000346144 C20orf194Q5TEA3 1177 aa29.44■■■□□ 2.3
MADCAM1-202ENST00000346144 C7orf43Q8WVR3 580 aa29.44■■■□□ 2.3
MADCAM1-202ENST00000346144 PPEF1O14829 653 aaPredicted RBP29.43■■■□□ 2.3
MADCAM1-202ENST00000346144 CELF1Q92879 486 aaKnown RBP29.43■■■□□ 2.3
MADCAM1-202ENST00000346144 SPEF2Q9C093 1822 aa29.43■■■□□ 2.3
MADCAM1-202ENST00000346144 LRRC37AA6NMS7 1700 aa29.42■■■□□ 2.3
MADCAM1-202ENST00000346144 ZBTB7BO15156 539 aaPredicted RBP29.42■■■□□ 2.3
MADCAM1-202ENST00000346144 C21orf2O43822 256 aa29.42■■■□□ 2.3
MADCAM1-202ENST00000346144 GRIN3BO60391 1043 aa29.42■■■□□ 2.3
MADCAM1-202ENST00000346144 ANKRD44Q8N8A2 993 aa29.42■■■□□ 2.3
MADCAM1-202ENST00000346144 COG6Q9Y2V7 657 aa29.42■■■□□ 2.3
MADCAM1-202ENST00000346144 ITGA6P23229 1130 aa29.41■■■□□ 2.3
MADCAM1-202ENST00000346144 RPS8P62241 208 aaKnown RBP29.41■■■□□ 2.3
MADCAM1-202ENST00000346144 TMC4Q7Z404 712 aa29.41■■■□□ 2.3
MADCAM1-202ENST00000346144 CDC5LQ99459 802 aaKnown RBP29.41■■■□□ 2.3
MADCAM1-202ENST00000346144 CHMP3Q9Y3E7 222 aa29.41■■■□□ 2.3
MADCAM1-202ENST00000346144 LRRFIP2Q9Y608 721 aaKnown RBP29.41■■■□□ 2.3
MADCAM1-202ENST00000346144 FER1L6Q2WGJ9 1857 aa29.4■■■□□ 2.3
MADCAM1-202ENST00000346144 SOGA3Q5TF21 947 aa29.4■■■□□ 2.3
MADCAM1-202ENST00000346144 ZNF219Q9P2Y4 722 aaPredicted RBP29.4■■■□□ 2.3
MADCAM1-202ENST00000346144 DDX19BQ9UMR2 479 aa29.4■■■□□ 2.3
MADCAM1-202ENST00000346144 CHD4Q14839 1912 aa29.39■■■□□ 2.3
MADCAM1-202ENST00000346144 IFIT5Q13325 482 aaKnown RBP29.39■■■□□ 2.3
MADCAM1-202ENST00000346144 ANKRD18AQ8IVF6 992 aa29.39■■■□□ 2.3
MADCAM1-202ENST00000346144 ATP6V0A2Q9Y487 856 aa29.39■■■□□ 2.3
MADCAM1-202ENST00000346144 ANKRD18BA2A2Z9 1011 aa29.38■■■□□ 2.29
MADCAM1-202ENST00000346144 GNAI2P04899 355 aa29.38■■■□□ 2.29
MADCAM1-202ENST00000346144 YY1P25490 414 aa29.37■■■□□ 2.29
MADCAM1-202ENST00000346144 CCDC57Q2TAC2 916 aa29.37■■■□□ 2.29
MADCAM1-202ENST00000346144 CCDC93Q567U6 631 aa29.37■■■□□ 2.29
MADCAM1-202ENST00000346144 CC2D2BQ6DHV5 1058 aa29.37■■■□□ 2.29
MADCAM1-202ENST00000346144 SP8Q8IXZ3 490 aa29.37■■■□□ 2.29
MADCAM1-202ENST00000346144 SNED1Q8TER0 1413 aa29.35■■■□□ 2.29
MADCAM1-202ENST00000346144 OLFM4Q6UX06 510 aa29.35■■■□□ 2.29
MADCAM1-202ENST00000346144 TMX4Q9H1E5 349 aaPredicted RBP29.35■■■□□ 2.29
MADCAM1-202ENST00000346144 CHMP4BQ9H444 224 aaKnown RBP29.35■■■□□ 2.29
MADCAM1-202ENST00000346144 SUPT16HQ9Y5B9 1047 aaKnown RBP29.35■■■□□ 2.29
MADCAM1-202ENST00000346144 IGHMBP2P38935 993 aaKnown RBP29.34■■■□□ 2.29
MADCAM1-202ENST00000346144 ARHGAP27Q6ZUM4 889 aa29.34■■■□□ 2.29
MADCAM1-202ENST00000346144 GRIPAP1Q4V328 841 aa29.33■■■□□ 2.29
MADCAM1-202ENST00000346144 SLC51AQ86UW1 340 aa29.33■■■□□ 2.29
MADCAM1-202ENST00000346144 RTKN2Q8IZC4 609 aa29.33■■■□□ 2.29
MADCAM1-202ENST00000346144 BSDC1Q9NW68 430 aaPredicted RBP29.33■■■□□ 2.29
MADCAM1-202ENST00000346144 MTX1Q13505 466 aa29.31■■■□□ 2.28
MADCAM1-202ENST00000346144 TAF7LQ5H9L4 462 aa29.31■■■□□ 2.28
MADCAM1-202ENST00000346144 LTBP1Q14766 1721 aa29.3■■■□□ 2.28
MADCAM1-202ENST00000346144 MPHOSPH8Q99549 860 aa29.3■■■□□ 2.28
MADCAM1-202ENST00000346144 ZBTB40Q9NUA8 1239 aa29.3■■■□□ 2.28
MADCAM1-202ENST00000346144 LTBP3Q9NS15 1303 aa29.3■■■□□ 2.28
MADCAM1-202ENST00000346144 SBF1O95248 1867 aa29.29■■■□□ 2.28
MADCAM1-202ENST00000346144 NFKBIEO00221 500 aa29.29■■■□□ 2.28
MADCAM1-202ENST00000346144 ZNF594Q96JF6 807 aaPredicted RBP29.29■■■□□ 2.28
MADCAM1-202ENST00000346144 C1orf115Q9H7X2 142 aa29.29■■■□□ 2.28
MADCAM1-202ENST00000346144 A0A1B0GUL6 1792 aa29.28■■■□□ 2.28
MADCAM1-202ENST00000346144 RFX5P48382 616 aaPredicted RBP29.27■■■□□ 2.28
MADCAM1-202ENST00000346144 FKBP4Q02790 459 aaKnown RBP eCLIP29.27■■■□□ 2.28
MADCAM1-202ENST00000346144 TAOK3Q9H2K8 898 aa29.27■■■□□ 2.28
MADCAM1-202ENST00000346144 CCDC88AQ3V6T2 1871 aa29.27■■■□□ 2.28
MADCAM1-202ENST00000346144 RASSF7Q02833 373 aa29.26■■■□□ 2.27
MADCAM1-202ENST00000346144 MPNDQ8N594 471 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms