RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
SPAST-202ENST00000345662 CCDC121Q6ZUS5 278 aa19.98■□□□□ 0.79
SPAST-202ENST00000345662 IQCA1Q86XH1 822 aa19.98■□□□□ 0.79
SPAST-202ENST00000345662 NLRP5P59047 1200 aa19.98■□□□□ 0.79
SPAST-202ENST00000345662 CEP57Q86XR8 500 aa19.98■□□□□ 0.79
SPAST-202ENST00000345662 BCL2L12Q9HB09 334 aa19.98■□□□□ 0.79
SPAST-202ENST00000345662 SPTLC2O15270 562 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 RMND1Q9NWS8 449 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 KARSQ15046 597 aaKnown RBP19.97■□□□□ 0.79
SPAST-202ENST00000345662 MSL1Q68DK7 614 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 KLF18A0A0U1RQI7 1052 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 PPP2R3AQ06190 1150 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 CCDC96Q2M329 555 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 CEP85Q6P2H3 762 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 Q6ZUG5 572 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 ABCF2Q9UG63 623 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
SPAST-202ENST00000345662 RHOXF2BP0C7M4 288 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 NOP2P46087 812 aaKnown RBP19.97■□□□□ 0.79
SPAST-202ENST00000345662 AMPD3Q01432 767 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 MAP3K12Q12852 859 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 UBE4AQ14139 1066 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 ELF2Q15723 593 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 TMEM67Q5HYA8 995 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 TRIM47Q96LD4 638 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 RHOXF2Q9BQY4 288 aa19.97■□□□□ 0.79
SPAST-202ENST00000345662 UTP14AQ9BVJ6 771 aaKnown RBP19.97■□□□□ 0.79
SPAST-202ENST00000345662 LRRC2Q9BYS8 371 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 HAND2P61296 217 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 FAM69CQ0P6D2 419 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 LZTFL1Q9NQ48 299 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 TMEM132AQ24JP5 1023 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 GBP6Q6ZN66 633 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 SLC26A6Q9BXS9 759 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 NESP48681 1621 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 PI4KAP2A4QPH2 592 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 CHMLP26374 656 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 PI4KAP1Q8N8J0 262 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 IQGAP2Q13576 1575 aa19.96■□□□□ 0.79
SPAST-202ENST00000345662 TACC1O75410 805 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 ZNF569Q5MCW4 686 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 RRAGBQ5VZM2 374 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 RAB11FIP4Q86YS3 637 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 CCDC144CPQ8IYA2 1237 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 FAM76AQ8TAV0 307 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 NSRP1Q9H0G5 558 aaKnown RBP19.95■□□□□ 0.78
SPAST-202ENST00000345662 SEC63Q9UGP8 760 aaKnown RBP19.95■□□□□ 0.78
SPAST-202ENST00000345662 MAP3K2Q9Y2U5 619 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 KRT86O43790 486 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 KRT83P78385 493 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 TMEM266Q2M3C6 531 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 WAPLQ7Z5K2 1190 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 C8orf58Q8NAV2 365 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 MYO1BO43795 1136 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 IFI16Q16666 785 aaKnown RBP19.95■□□□□ 0.78
SPAST-202ENST00000345662 CCDC40Q4G0X9 1142 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 TCP11L1Q9NUJ3 509 aa19.95■□□□□ 0.78
SPAST-202ENST00000345662 POTEJP0CG39 1038 aa19.94■□□□□ 0.78
SPAST-202ENST00000345662 UBA7P41226 1012 aa19.94■□□□□ 0.78
SPAST-202ENST00000345662 ANKRD24Q8TF21 1146 aa19.94■□□□□ 0.78
SPAST-202ENST00000345662 ALG1Q9BT22 464 aa19.94■□□□□ 0.78
SPAST-202ENST00000345662 MARCKSP29966 332 aaPredicted RBP19.94■□□□□ 0.78
SPAST-202ENST00000345662 USP5P45974 858 aa19.94■□□□□ 0.78
SPAST-202ENST00000345662 PRPF4BQ13523 1007 aaKnown RBP19.94■□□□□ 0.78
SPAST-202ENST00000345662 ZNF75DP51815 510 aa19.94■□□□□ 0.78
SPAST-202ENST00000345662 CATIPQ7Z7H3 387 aa19.94■□□□□ 0.78
SPAST-202ENST00000345662 RANBP6O60518 1105 aaKnown RBP19.93■□□□□ 0.78
SPAST-202ENST00000345662 ARFGAP2Q8N6H7 521 aa19.93■□□□□ 0.78
SPAST-202ENST00000345662 A0A087WZG4 1122 aa19.93■□□□□ 0.78
SPAST-202ENST00000345662 CCDC155Q8N6L0 562 aa19.93■□□□□ 0.78
SPAST-202ENST00000345662 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
SPAST-202ENST00000345662 BMP15O95972 392 aa19.93■□□□□ 0.78
SPAST-202ENST00000345662 AFMP43652 599 aa19.93■□□□□ 0.78
SPAST-202ENST00000345662 ANKS4BQ8N8V4 417 aa19.93■□□□□ 0.78
SPAST-202ENST00000345662 IGHMBP2P38935 993 aaKnown RBP19.93■□□□□ 0.78
SPAST-202ENST00000345662 VAMP4O75379 141 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 AMOTQ4VCS5 1084 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 CUL7Q14999 1698 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 RUFY3Q7L099 469 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 CCDC114Q96M63 670 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 BAG1Q99933 345 aaPredicted RBP19.92■□□□□ 0.78
SPAST-202ENST00000345662 TMEM63CQ9P1W3 806 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 ZEB2O60315 1214 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 NUP160Q12769 1436 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 DRC1Q96MC2 740 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 ZMYM4Q5VZL5 1548 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 PRAG1Q86YV5 1406 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 TTC41PQ6P2S7 1318 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 ZNF76P36508 570 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 KIF5AQ12840 1032 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 CALML4Q96GE6 196 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
SPAST-202ENST00000345662 ATL3Q6DD88 541 aa19.91■□□□□ 0.78
SPAST-202ENST00000345662 CTNNBL1Q8WYA6 563 aaPredicted RBP19.91■□□□□ 0.78
SPAST-202ENST00000345662 MRC2Q9UBG0 1479 aa19.91■□□□□ 0.78
SPAST-202ENST00000345662 PER1O15534 1290 aaPredicted RBP19.91■□□□□ 0.78
SPAST-202ENST00000345662 IFIT5Q13325 482 aaKnown RBP19.91■□□□□ 0.78
SPAST-202ENST00000345662 ZNF287Q9HBT7 754 aa19.91■□□□□ 0.78
SPAST-202ENST00000345662 IDEP14735 1019 aa19.91■□□□□ 0.78
SPAST-202ENST00000345662 CREB3L3Q68CJ9 461 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms