RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 BTBD11A6QL63 1104 aa21.01■□□□□ 0.95
VHL-202ENST00000345392 CEBPZQ03701 1054 aaKnown RBP21.01■□□□□ 0.95
VHL-202ENST00000345392 TEFQ10587 303 aa21.01■□□□□ 0.95
VHL-202ENST00000345392 CWF19L2Q2TBE0 894 aaKnown RBP21.01■□□□□ 0.95
VHL-202ENST00000345392 ZNF530Q6P9A1 599 aaPredicted RBP21.01■□□□□ 0.95
VHL-202ENST00000345392 RBM43Q6ZSC3 357 aaKnown RBP21.01■□□□□ 0.95
VHL-202ENST00000345392 USP27XA6NNY8 438 aa21■□□□□ 0.95
VHL-202ENST00000345392 ZNF771Q7L3S4 317 aaPredicted RBP21■□□□□ 0.95
VHL-202ENST00000345392 BOLA2Q9H3K6 86 aa21■□□□□ 0.95
VHL-202ENST00000345392 PHF8Q9UPP1 1060 aa21■□□□□ 0.95
VHL-202ENST00000345392 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21■□□□□ 0.95
VHL-202ENST00000345392 BABAM1Q9NWV8 329 aa21■□□□□ 0.95
VHL-202ENST00000345392 TLR7Q9NYK1 1049 aaKnown RBP21■□□□□ 0.95
VHL-202ENST00000345392 NOL12Q9UGY1 213 aaKnown RBP eCLIP21■□□□□ 0.95
VHL-202ENST00000345392 PAXBP1Q9Y5B6 917 aa21■□□□□ 0.95
VHL-202ENST00000345392 V9GYY5 206 aaPredicted RBP21■□□□□ 0.95
VHL-202ENST00000345392 ADCY9O60503 1353 aa20.99■□□□□ 0.95
VHL-202ENST00000345392 CRYBG1Q9Y4K1 1723 aa20.99■□□□□ 0.95
VHL-202ENST00000345392 RPS6KB1P23443 525 aa20.99■□□□□ 0.95
VHL-202ENST00000345392 CEP135Q66GS9 1140 aa20.99■□□□□ 0.95
VHL-202ENST00000345392 EAF2Q96CJ1 260 aaPredicted RBP20.99■□□□□ 0.95
VHL-202ENST00000345392 N4BP2Q86UW6 1770 aaPredicted RBP20.99■□□□□ 0.95
VHL-202ENST00000345392 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
VHL-202ENST00000345392 A0A087WWV3 80 aa20.99■□□□□ 0.95
VHL-202ENST00000345392 LMOD2Q6P5Q4 547 aa20.99■□□□□ 0.95
VHL-202ENST00000345392 CEMIPQ8WUJ3 1361 aa20.98■□□□□ 0.95
VHL-202ENST00000345392 SYCP1Q15431 976 aa20.98■□□□□ 0.95
VHL-202ENST00000345392 ZNF589Q86UQ0 364 aaPredicted RBP20.98■□□□□ 0.95
VHL-202ENST00000345392 FSD1Q9BTV5 496 aa20.98■□□□□ 0.95
VHL-202ENST00000345392 MAP3K2Q9Y2U5 619 aa20.98■□□□□ 0.95
VHL-202ENST00000345392 ESCO1Q5FWF5 840 aa20.97■□□□□ 0.95
VHL-202ENST00000345392 C11orf57Q6ZUT1 292 aaPredicted RBP20.97■□□□□ 0.95
VHL-202ENST00000345392 LRRC8AQ8IWT6 810 aa20.97■□□□□ 0.95
VHL-202ENST00000345392 IP6K1Q92551 441 aa20.97■□□□□ 0.95
VHL-202ENST00000345392 CGNQ9P2M7 1197 aaKnown RBP20.97■□□□□ 0.95
VHL-202ENST00000345392 SASH1O94885 1247 aa20.97■□□□□ 0.95
VHL-202ENST00000345392 MTX1Q13505 466 aa20.97■□□□□ 0.95
VHL-202ENST00000345392 ANKRD1Q15327 319 aa20.97■□□□□ 0.95
VHL-202ENST00000345392 SIL1Q9H173 461 aa20.97■□□□□ 0.95
VHL-202ENST00000345392 DDX41Q9UJV9 622 aaKnown RBP20.97■□□□□ 0.95
VHL-202ENST00000345392 AIMP1Q12904 312 aaKnown RBP20.96■□□□□ 0.95
VHL-202ENST00000345392 RNF20Q5VTR2 975 aa20.96■□□□□ 0.95
VHL-202ENST00000345392 GOLGA6L19H0YKK7 550 aa20.96■□□□□ 0.95
VHL-202ENST00000345392 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
VHL-202ENST00000345392 BRF1Q92994 677 aa20.96■□□□□ 0.95
VHL-202ENST00000345392 EDC3Q96F86 508 aaKnown RBP20.96■□□□□ 0.95
VHL-202ENST00000345392 LTN1O94822 1766 aa20.96■□□□□ 0.95
VHL-202ENST00000345392 RGPD2P0DJD1 1756 aa20.95■□□□□ 0.94
VHL-202ENST00000345392 FOSBP53539 338 aa20.95■□□□□ 0.94
VHL-202ENST00000345392 TRMT1Q9NXH9 659 aaKnown RBP20.95■□□□□ 0.94
VHL-202ENST00000345392 USP16Q9Y5T5 823 aa20.95■□□□□ 0.94
VHL-202ENST00000345392 PSME1Q06323 249 aa20.95■□□□□ 0.94
VHL-202ENST00000345392 IQCB1Q15051 598 aa20.95■□□□□ 0.94
VHL-202ENST00000345392 FILIP1Q7Z7B0 1213 aa20.95■□□□□ 0.94
VHL-202ENST00000345392 ERC1Q8IUD2 1116 aa20.95■□□□□ 0.94
VHL-202ENST00000345392 ZNF215Q9UL58 517 aaPredicted RBP20.94■□□□□ 0.94
VHL-202ENST00000345392 KIF18AQ8NI77 898 aa20.94■□□□□ 0.94
VHL-202ENST00000345392 FTOQ9C0B1 505 aaKnown RBP eCLIP20.94■□□□□ 0.944e-10■□□□□ 10.1
VHL-202ENST00000345392 H3BQV1 296 aa20.93■□□□□ 0.94
VHL-202ENST00000345392 HIP1O00291 1037 aa20.93■□□□□ 0.94
VHL-202ENST00000345392 SKILP12757 684 aa20.93■□□□□ 0.94
VHL-202ENST00000345392 RESTQ13127 1097 aa20.93■□□□□ 0.94
VHL-202ENST00000345392 IFFO2Q5TF58 517 aa20.93■□□□□ 0.94
VHL-202ENST00000345392 KLHDC4Q8TBB5 520 aa20.93■□□□□ 0.94
VHL-202ENST00000345392 PXDNQ92626 1479 aa20.93■□□□□ 0.94
VHL-202ENST00000345392 G3BP1Q13283 466 aaKnown RBP eCLIP20.93■□□□□ 0.94
VHL-202ENST00000345392 FBXW7Q969H0 707 aa20.93■□□□□ 0.94
VHL-202ENST00000345392 PTPN14Q15678 1187 aa20.92■□□□□ 0.94
VHL-202ENST00000345392 ANKARQ7Z5J8 1434 aa20.92■□□□□ 0.94
VHL-202ENST00000345392 KMT5BQ4FZB7 885 aa20.92■□□□□ 0.94
VHL-202ENST00000345392 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
VHL-202ENST00000345392 ERCC4Q92889 916 aaPredicted RBP20.92■□□□□ 0.94
VHL-202ENST00000345392 SUCLG2Q96I99 432 aa20.92■□□□□ 0.94
VHL-202ENST00000345392 LRRC2Q9BYS8 371 aa20.92■□□□□ 0.94
VHL-202ENST00000345392 CHGBP05060 677 aa20.91■□□□□ 0.94
VHL-202ENST00000345392 HSP90B1P14625 803 aaKnown RBP20.91■□□□□ 0.94
VHL-202ENST00000345392 BICC1Q9H694 974 aaKnown RBP20.91■□□□□ 0.94
VHL-202ENST00000345392 CDC25BP30305 580 aa20.91■□□□□ 0.94
VHL-202ENST00000345392 GTF3C6Q969F1 213 aa20.91■□□□□ 0.94
VHL-202ENST00000345392 KAZALD1Q96I82 304 aa20.91■□□□□ 0.94
VHL-202ENST00000345392 NDUFB9Q9Y6M9 179 aa20.91■□□□□ 0.94
VHL-202ENST00000345392 MORC2Q9Y6X9 1032 aaPredicted RBP20.91■□□□□ 0.94
VHL-202ENST00000345392 NPHP1O15259 732 aa20.91■□□□□ 0.94
VHL-202ENST00000345392 PPFIA3O75145 1194 aa20.91■□□□□ 0.94
VHL-202ENST00000345392 SLFN14P0C7P3 912 aa20.91■□□□□ 0.94
VHL-202ENST00000345392 BECN2A8MW95 431 aa20.9■□□□□ 0.94
VHL-202ENST00000345392 DBF4Q9UBU7 674 aaPredicted RBP20.9■□□□□ 0.94
VHL-202ENST00000345392 CCDC69A6NI79 296 aa20.9■□□□□ 0.94
VHL-202ENST00000345392 AKAP4Q5JQC9 854 aa20.9■□□□□ 0.94
VHL-202ENST00000345392 Q6ZUG5 572 aa20.9■□□□□ 0.94
VHL-202ENST00000345392 CCAR1Q8IX12 1150 aaKnown RBP20.9■□□□□ 0.94
VHL-202ENST00000345392 RNMTO43148 476 aaKnown RBP20.89■□□□□ 0.93
VHL-202ENST00000345392 TAF5LO75529 589 aa20.89■□□□□ 0.93
VHL-202ENST00000345392 RBM6P78332 1123 aaKnown RBP20.89■□□□□ 0.93
VHL-202ENST00000345392 ALDH8A1Q9H2A2 487 aaPredicted RBP20.89■□□□□ 0.93
VHL-202ENST00000345392 GOLPH3LQ9H4A5 285 aa20.89■□□□□ 0.93
VHL-202ENST00000345392 SNRKQ9NRH2 765 aa20.89■□□□□ 0.93
VHL-202ENST00000345392 ADGRL3Q9HAR2 1447 aa20.89■□□□□ 0.93
VHL-202ENST00000345392 HOXB7P09629 217 aa20.89■□□□□ 0.93
VHL-202ENST00000345392 C1orf141Q5JVX7 400 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms