RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 SUPT20HQ8NEM7 779 aa20.55■□□□□ 0.88
ATG4B-201ENST00000344376 HSPA6P17066 643 aa20.54■□□□□ 0.88
ATG4B-201ENST00000344376 DPP8Q6V1X1 898 aaPredicted RBP20.53■□□□□ 0.88
ATG4B-201ENST00000344376 LARGE2Q8N3Y3 721 aa20.53■□□□□ 0.88
ATG4B-201ENST00000344376 WDR90Q96KV7 1748 aa20.52■□□□□ 0.88
ATG4B-201ENST00000344376 DDNO94850 711 aaPredicted RBP20.52■□□□□ 0.88
ATG4B-201ENST00000344376 IGKV5-2P06315 115 aa20.52■□□□□ 0.88
ATG4B-201ENST00000344376 FSTL1Q12841 308 aa20.52■□□□□ 0.88
ATG4B-201ENST00000344376 CCDC152Q4G0S7 254 aa20.52■□□□□ 0.88
ATG4B-201ENST00000344376 E9PSI1 815 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 PDE8AO60658 829 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 MPNDQ8N594 471 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 SMC1BQ8NDV3 1235 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 DNAAF4Q8WXU2 420 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 VPS33BQ9H267 617 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 CDHR2Q9BYE9 1310 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 IQCA1LA6NCM1 817 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 NEURL1BA8MQ27 555 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 FZD9O00144 591 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 PPIP5K2O43314 1243 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 EIF6P56537 245 aaKnown RBP20.51■□□□□ 0.87
ATG4B-201ENST00000344376 SLC51AQ86UW1 340 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 NIM1KQ8IY84 436 aa20.51■□□□□ 0.87
ATG4B-201ENST00000344376 ZNF541Q9H0D2 1346 aa20.5■□□□□ 0.87
ATG4B-201ENST00000344376 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
ATG4B-201ENST00000344376 JARID2Q92833 1246 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-201ENST00000344376 CELF1Q92879 486 aaKnown RBP20.5■□□□□ 0.87
ATG4B-201ENST00000344376 RTFDC1Q9BY42 306 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-201ENST00000344376 L3MBTL3Q96JM7 780 aaPredicted RBP20.49■□□□□ 0.87
ATG4B-201ENST00000344376 POTECB2RU33 542 aa20.48■□□□□ 0.87
ATG4B-201ENST00000344376 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
ATG4B-201ENST00000344376 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
ATG4B-201ENST00000344376 AOC3Q16853 763 aa20.47■□□□□ 0.87
ATG4B-201ENST00000344376 GPC2Q8N158 579 aa20.47■□□□□ 0.87
ATG4B-201ENST00000344376 CACNA1FO60840 1977 aa20.47■□□□□ 0.87
ATG4B-201ENST00000344376 CTSWP56202 376 aa20.46■□□□□ 0.87
ATG4B-201ENST00000344376 APLP1P51693 650 aa20.46■□□□□ 0.87
ATG4B-201ENST00000344376 GCKRQ14397 625 aa20.46■□□□□ 0.87
ATG4B-201ENST00000344376 UBE3BQ7Z3V4 1068 aa20.46■□□□□ 0.87
ATG4B-201ENST00000344376 LRRC37AA6NMS7 1700 aa20.45■□□□□ 0.86
ATG4B-201ENST00000344376 KIAA2012Q0VF49 1180 aa20.45■□□□□ 0.86
ATG4B-201ENST00000344376 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
ATG4B-201ENST00000344376 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
ATG4B-201ENST00000344376 SEC31BQ9NQW1 1179 aa20.45■□□□□ 0.86
ATG4B-201ENST00000344376 HACL1Q9UJ83 578 aa20.45■□□□□ 0.86
ATG4B-201ENST00000344376 NSFL1CQ9UNZ2 370 aaKnown RBP20.45■□□□□ 0.86
ATG4B-201ENST00000344376 GJA3Q9Y6H8 435 aa20.45■□□□□ 0.86
ATG4B-201ENST00000344376 H7C1W4 665 aa20.44■□□□□ 0.86
ATG4B-201ENST00000344376 SLFN5Q08AF3 891 aa20.44■□□□□ 0.86
ATG4B-201ENST00000344376 CDC5LQ99459 802 aaKnown RBP20.44■□□□□ 0.86
ATG4B-201ENST00000344376 COL4A5P29400 1685 aa20.44■□□□□ 0.86
ATG4B-201ENST00000344376 ANKRD18AQ8IVF6 992 aa20.43■□□□□ 0.86
ATG4B-201ENST00000344376 ZNRF3Q9ULT6 936 aa20.43■□□□□ 0.86
ATG4B-201ENST00000344376 F6X3S4 739 aa20.42■□□□□ 0.86
ATG4B-201ENST00000344376 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
ATG4B-201ENST00000344376 EYA3Q99504 573 aa20.42■□□□□ 0.86
ATG4B-201ENST00000344376 TAF1DQ9H5J8 278 aaPredicted RBP20.42■□□□□ 0.86
ATG4B-201ENST00000344376 TAF1P21675 1872 aa20.42■□□□□ 0.86
ATG4B-201ENST00000344376 SCN4AP35499 1836 aa20.42■□□□□ 0.86
ATG4B-201ENST00000344376 C6orf229H3BNL8 230 aa20.42■□□□□ 0.86
ATG4B-201ENST00000344376 GPSM2P81274 684 aa20.42■□□□□ 0.86
ATG4B-201ENST00000344376 TTLL11Q8NHH1 800 aa20.42■□□□□ 0.86
ATG4B-201ENST00000344376 RTL9Q8NET4 1388 aa20.41■□□□□ 0.86
ATG4B-201ENST00000344376 WASHC4Q2M389 1173 aa20.41■□□□□ 0.86
ATG4B-201ENST00000344376 BEND3Q5T5X7 828 aa20.41■□□□□ 0.86
ATG4B-201ENST00000344376 PLA2G12BQ9BX93 195 aa20.41■□□□□ 0.86
ATG4B-201ENST00000344376 ANKIB1Q9P2G1 1089 aa20.41■□□□□ 0.86
ATG4B-201ENST00000344376 DUOX1Q9NRD9 1551 aa20.41■□□□□ 0.86
ATG4B-201ENST00000344376 EPHX2P34913 555 aa20.4■□□□□ 0.86
ATG4B-201ENST00000344376 CHADLQ6NUI6 762 aa20.4■□□□□ 0.86
ATG4B-201ENST00000344376 PNMA8AQ86V59 439 aaPredicted RBP20.4■□□□□ 0.86
ATG4B-201ENST00000344376 EAPPQ56P03 285 aaPredicted RBP20.39■□□□□ 0.85
ATG4B-201ENST00000344376 SLC4A10Q6U841 1118 aa20.39■□□□□ 0.85
ATG4B-201ENST00000344376 LDHDQ86WU2 507 aa20.39■□□□□ 0.85
ATG4B-201ENST00000344376 CDCA7LQ96GN5 454 aa20.39■□□□□ 0.85
ATG4B-201ENST00000344376 GREM2Q9H772 168 aa20.39■□□□□ 0.85
ATG4B-201ENST00000344376 PODXL2Q9NZ53 605 aa20.39■□□□□ 0.85
ATG4B-201ENST00000344376 COL4A1P02462 1669 aa20.39■□□□□ 0.85
ATG4B-201ENST00000344376 TBC1D16Q8TBP0 767 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 POLLQ9UGP5 575 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 ALDH1L1O75891 902 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 UFL1O94874 794 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 CASP7P55210 303 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 CXCL9Q07325 125 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 TNIP1Q15025 636 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 CIAPIN1Q6FI81 312 aa20.38■□□□□ 0.85
ATG4B-201ENST00000344376 MRPL50Q8N5N7 158 aaKnown RBP20.38■□□□□ 0.85
ATG4B-201ENST00000344376 PTPRCP08575 1304 aa20.37■□□□□ 0.85
ATG4B-201ENST00000344376 XDHP47989 1333 aa20.37■□□□□ 0.85
ATG4B-201ENST00000344376 RIMBP2O15034 1052 aa20.37■□□□□ 0.85
ATG4B-201ENST00000344376 IGHMBP2P38935 993 aaKnown RBP20.37■□□□□ 0.85
ATG4B-201ENST00000344376 MIER1Q8N108 512 aa20.37■□□□□ 0.85
ATG4B-201ENST00000344376 SRCIN1Q9C0H9 1055 aa20.37■□□□□ 0.85
ATG4B-201ENST00000344376 CLEC11AQ9Y240 323 aa20.37■□□□□ 0.85
ATG4B-201ENST00000344376 CT47B1P0C2W7 299 aaPredicted RBP20.36■□□□□ 0.85
ATG4B-201ENST00000344376 POTEIP0CG38 1075 aa20.36■□□□□ 0.85
ATG4B-201ENST00000344376 POTEJP0CG39 1038 aa20.36■□□□□ 0.85
ATG4B-201ENST00000344376 ALDH1L2Q3SY69 923 aa20.36■□□□□ 0.85
ATG4B-201ENST00000344376 SSH1Q8WYL5 1049 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms