RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 IQCA1LA6NCM1 817 aa23.69■■□□□ 1.38
CDHR4-201ENST00000343366 SOGA3Q5TF21 947 aa23.69■■□□□ 1.38
CDHR4-201ENST00000343366 ZKSCAN2Q63HK3 967 aa23.69■■□□□ 1.38
CDHR4-201ENST00000343366 TPTE2Q6XPS3 522 aa23.69■■□□□ 1.38
CDHR4-201ENST00000343366 CNBD1Q8NA66 436 aa23.69■■□□□ 1.38
CDHR4-201ENST00000343366 LINS1Q8NG48 757 aa23.69■■□□□ 1.38
CDHR4-201ENST00000343366 MASTLQ96GX5 879 aa23.69■■□□□ 1.38
CDHR4-201ENST00000343366 ISCA1Q9BUE6 129 aa23.69■■□□□ 1.38
CDHR4-201ENST00000343366 KLRG2A4D1S0 409 aaPredicted RBP23.68■■□□□ 1.38
CDHR4-201ENST00000343366 HSP90B1P14625 803 aaKnown RBP23.68■■□□□ 1.38
CDHR4-201ENST00000343366 ATF7IPQ6VMQ6 1270 aa23.68■■□□□ 1.38
CDHR4-201ENST00000343366 CTCFP49711 727 aaPredicted RBP23.67■■□□□ 1.38
CDHR4-201ENST00000343366 NBPF5PQ86XG9 351 aaPredicted RBP23.67■■□□□ 1.38
CDHR4-201ENST00000343366 FRAT1Q92837 279 aaPredicted RBP23.67■■□□□ 1.38
CDHR4-201ENST00000343366 MYD88Q99836 296 aa23.67■■□□□ 1.38
CDHR4-201ENST00000343366 ZNF541Q9H0D2 1346 aa23.66■■□□□ 1.38
CDHR4-201ENST00000343366 TMEM88BA6NKF7 163 aa23.66■■□□□ 1.38
CDHR4-201ENST00000343366 NPHP1O15259 732 aa23.66■■□□□ 1.38
CDHR4-201ENST00000343366 ALDH1L1O75891 902 aa23.66■■□□□ 1.38
CDHR4-201ENST00000343366 SLC34A2O95436 690 aa23.66■■□□□ 1.38
CDHR4-201ENST00000343366 NLRP10Q86W26 655 aa23.66■■□□□ 1.38
CDHR4-201ENST00000343366 CCT4P50991 539 aaKnown RBP23.65■■□□□ 1.38
CDHR4-201ENST00000343366 UTP14AQ9BVJ6 771 aaKnown RBP23.65■■□□□ 1.38
CDHR4-201ENST00000343366 CWC25Q9NXE8 425 aaPredicted RBP23.65■■□□□ 1.38
CDHR4-201ENST00000343366 RASSF10A6NK89 507 aa23.64■■□□□ 1.37
CDHR4-201ENST00000343366 GPTP24298 496 aa23.64■■□□□ 1.37
CDHR4-201ENST00000343366 GTF2E1P29083 439 aaPredicted RBP23.64■■□□□ 1.37
CDHR4-201ENST00000343366 ST5P78524 1137 aa23.64■■□□□ 1.37
CDHR4-201ENST00000343366 BEND3Q5T5X7 828 aa23.64■■□□□ 1.37
CDHR4-201ENST00000343366 SRCIN1Q9C0H9 1055 aa23.64■■□□□ 1.37
CDHR4-201ENST00000343366 UBN2Q6ZU65 1347 aa23.63■■□□□ 1.37
CDHR4-201ENST00000343366 F6X3S4 739 aa23.63■■□□□ 1.37
CDHR4-201ENST00000343366 CCDC93Q567U6 631 aa23.63■■□□□ 1.37
CDHR4-201ENST00000343366 SLC4A10Q6U841 1118 aa23.63■■□□□ 1.37
CDHR4-201ENST00000343366 LTBP1Q14766 1721 aa23.62■■□□□ 1.37
CDHR4-201ENST00000343366 NEURL1BA8MQ27 555 aa23.62■■□□□ 1.37
CDHR4-201ENST00000343366 ATP5J2-PTCD1G3V325 749 aa23.62■■□□□ 1.37
CDHR4-201ENST00000343366 TRIM27P14373 513 aa23.62■■□□□ 1.37
CDHR4-201ENST00000343366 FKBP4Q02790 459 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDHR4-201ENST00000343366 SUSD4Q5VX71 490 aa23.62■■□□□ 1.37
CDHR4-201ENST00000343366 ABCC4O15439 1325 aa23.61■■□□□ 1.37
CDHR4-201ENST00000343366 IGKV5-2P06315 115 aa23.61■■□□□ 1.37
CDHR4-201ENST00000343366 LBX1P52954 281 aa23.61■■□□□ 1.37
CDHR4-201ENST00000343366 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
CDHR4-201ENST00000343366 ZBTB38Q8NAP3 1195 aaPredicted RBP23.61■■□□□ 1.37
CDHR4-201ENST00000343366 TRMT112Q9UI30 125 aaKnown RBP23.61■■□□□ 1.37
CDHR4-201ENST00000343366 COL4A5P29400 1685 aa23.6■■□□□ 1.37
CDHR4-201ENST00000343366 SH3TC1Q8TE82 1336 aa23.6■■□□□ 1.37
CDHR4-201ENST00000343366 RIC1Q4ADV7 1423 aa23.6■■□□□ 1.37
CDHR4-201ENST00000343366 FZD9O00144 591 aa23.6■■□□□ 1.37
CDHR4-201ENST00000343366 NTSR2O95665 410 aa23.6■■□□□ 1.37
CDHR4-201ENST00000343366 PCCAP05165 728 aaPredicted RBP23.6■■□□□ 1.37
CDHR4-201ENST00000343366 HSPA8P11142 646 aaKnown RBP23.6■■□□□ 1.37
CDHR4-201ENST00000343366 DZIP1LQ8IYY4 767 aaKnown RBP23.6■■□□□ 1.37
CDHR4-201ENST00000343366 HDAC5Q9UQL6 1122 aa23.6■■□□□ 1.37
CDHR4-201ENST00000343366 NPR1P16066 1061 aa23.59■■□□□ 1.37
CDHR4-201ENST00000343366 GCKRQ14397 625 aa23.59■■□□□ 1.37
CDHR4-201ENST00000343366 INTS3Q68E01 1043 aaKnown RBP23.59■■□□□ 1.37
CDHR4-201ENST00000343366 OLFM4Q6UX06 510 aa23.59■■□□□ 1.37
CDHR4-201ENST00000343366 AIDAQ96BJ3 306 aa23.59■■□□□ 1.37
CDHR4-201ENST00000343366 ZNF277Q9NRM2 450 aaPredicted RBP23.59■■□□□ 1.37
CDHR4-201ENST00000343366 HACL1Q9UJ83 578 aa23.59■■□□□ 1.37
CDHR4-201ENST00000343366 EPHX2P34913 555 aa23.58■■□□□ 1.37
CDHR4-201ENST00000343366 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
CDHR4-201ENST00000343366 PDE3AQ14432 1141 aa23.57■■□□□ 1.36
CDHR4-201ENST00000343366 CWF19L2Q2TBE0 894 aaKnown RBP23.57■■□□□ 1.36
CDHR4-201ENST00000343366 SLC10A5Q5PT55 438 aa23.57■■□□□ 1.36
CDHR4-201ENST00000343366 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
CDHR4-201ENST00000343366 C9orf78Q9NZ63 289 aaPredicted RBP23.57■■□□□ 1.36
CDHR4-201ENST00000343366 CDHR2Q9BYE9 1310 aa23.57■■□□□ 1.36
CDHR4-201ENST00000343366 TRPM7Q96QT4 1865 aa23.56■■□□□ 1.36
CDHR4-201ENST00000343366 FAM177BA6PVY3 158 aa23.55■■□□□ 1.36
CDHR4-201ENST00000343366 H7C1W4 665 aa23.55■■□□□ 1.36
CDHR4-201ENST00000343366 EAPPQ56P03 285 aaPredicted RBP23.55■■□□□ 1.36
CDHR4-201ENST00000343366 PNMA8AQ86V59 439 aaPredicted RBP23.55■■□□□ 1.36
CDHR4-201ENST00000343366 CNTROBQ8N137 903 aa23.55■■□□□ 1.36
CDHR4-201ENST00000343366 ABHD8Q96I13 439 aa23.55■■□□□ 1.36
CDHR4-201ENST00000343366 GRM8O00222 908 aa23.54■■□□□ 1.36
CDHR4-201ENST00000343366 DEFB115Q30KQ5 88 aa23.54■■□□□ 1.36
CDHR4-201ENST00000343366 MAP1SQ66K74 1059 aaPredicted RBP23.54■■□□□ 1.36
CDHR4-201ENST00000343366 RTKN2Q8IZC4 609 aa23.54■■□□□ 1.36
CDHR4-201ENST00000343366 LAMB2P55268 1798 aa23.54■■□□□ 1.36
CDHR4-201ENST00000343366 WDR33Q9C0J8 1336 aaKnown RBP23.54■■□□□ 1.36
CDHR4-201ENST00000343366 IARSP41252 1262 aaKnown RBP23.53■■□□□ 1.36
CDHR4-201ENST00000343366 GPC2Q8N158 579 aa23.53■■□□□ 1.36
CDHR4-201ENST00000343366 CLUAP1Q96AJ1 413 aa23.53■■□□□ 1.36
CDHR4-201ENST00000343366 NLRP3Q96P20 1036 aa23.53■■□□□ 1.36
CDHR4-201ENST00000343366 UTYO14607 1347 aa23.53■■□□□ 1.36
CDHR4-201ENST00000343366 TNRC18O15417 2968 aaPredicted RBP23.52■■□□□ 1.36
CDHR4-201ENST00000343366 RRP1P56182 461 aaKnown RBP23.52■■□□□ 1.36
CDHR4-201ENST00000343366 NUTM1Q86Y26 1132 aa23.52■■□□□ 1.36
CDHR4-201ENST00000343366 FAM89AQ96GI7 184 aa23.52■■□□□ 1.36
CDHR4-201ENST00000343366 IRS4O14654 1257 aaPredicted RBP23.51■■□□□ 1.35
CDHR4-201ENST00000343366 GNAI3P08754 354 aa23.51■■□□□ 1.35
CDHR4-201ENST00000343366 CRY2Q49AN0 593 aa23.51■■□□□ 1.35
CDHR4-201ENST00000343366 PSMD1Q99460 953 aa23.51■■□□□ 1.35
CDHR4-201ENST00000343366 PDE8AO60658 829 aa23.5■■□□□ 1.35
CDHR4-201ENST00000343366 MAP2K1Q02750 393 aaPredicted RBP23.5■■□□□ 1.35
CDHR4-201ENST00000343366 UBE3BQ7Z3V4 1068 aa23.5■■□□□ 1.35
CDHR4-201ENST00000343366 SYNE4Q8N205 404 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms