RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 AOPEPQ8N6M6 819 aa17.89■□□□□ 0.46
SNX18-202ENST00000343017 BRF1Q92994 677 aa17.89■□□□□ 0.46
SNX18-202ENST00000343017 DNAJC2Q99543 621 aaKnown RBP17.89■□□□□ 0.46
SNX18-202ENST00000343017 GOLPH3LQ9H4A5 285 aa17.89■□□□□ 0.46
SNX18-202ENST00000343017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.89■□□□□ 0.46
SNX18-202ENST00000343017 SEC31AO94979 1220 aaKnown RBP17.89■□□□□ 0.45
SNX18-202ENST00000343017 BLOC1S2Q6QNY1 142 aa17.89■□□□□ 0.45
SNX18-202ENST00000343017 TAF7Q15545 349 aaPredicted RBP17.89■□□□□ 0.45
SNX18-202ENST00000343017 SARM1Q6SZW1 724 aa17.89■□□□□ 0.45
SNX18-202ENST00000343017 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.88■□□□□ 0.45
SNX18-202ENST00000343017 TTC21BQ7Z4L5 1316 aa17.88■□□□□ 0.45
SNX18-202ENST00000343017 SLFNL1Q499Z3 407 aa17.88■□□□□ 0.45
SNX18-202ENST00000343017 CCAR1Q8IX12 1150 aaKnown RBP17.88■□□□□ 0.45
SNX18-202ENST00000343017 THEMISQ8N1K5 641 aaPredicted RBP17.88■□□□□ 0.45
SNX18-202ENST00000343017 ADCY9O60503 1353 aa17.88■□□□□ 0.45
SNX18-202ENST00000343017 ST5P78524 1137 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 NBPF11Q86T75 865 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 NGDNQ8NEJ9 315 aaKnown RBP17.87■□□□□ 0.45
SNX18-202ENST00000343017 NEMFO60524 1076 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 KCNB2Q92953 911 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 ZFP91Q96JP5 570 aaPredicted RBP17.87■□□□□ 0.45
SNX18-202ENST00000343017 PPP1R13BQ96KQ4 1090 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 LRRC2Q9BYS8 371 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 RAD51AP2Q09MP3 1159 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 HDGFL1Q5TGJ6 251 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
SNX18-202ENST00000343017 FEZ2Q9UHY8 353 aaPredicted RBP17.87■□□□□ 0.45
SNX18-202ENST00000343017 ACEP12821 1306 aa17.86■□□□□ 0.45
SNX18-202ENST00000343017 A0A0D9SFI3 127 aa17.86■□□□□ 0.45
SNX18-202ENST00000343017 H3BQV1 296 aa17.86■□□□□ 0.45
SNX18-202ENST00000343017 RESTQ13127 1097 aa17.86■□□□□ 0.45
SNX18-202ENST00000343017 STX1AQ16623 288 aa17.86■□□□□ 0.45
SNX18-202ENST00000343017 IFFO2Q5TF58 517 aa17.86■□□□□ 0.45
SNX18-202ENST00000343017 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
SNX18-202ENST00000343017 ECHDC1Q9NTX5 307 aa17.86■□□□□ 0.45
SNX18-202ENST00000343017 CLASRPQ8N2M8 674 aaKnown RBP17.86■□□□□ 0.45
SNX18-202ENST00000343017 RIMS1Q86UR5 1692 aaKnown RBP17.86■□□□□ 0.45
SNX18-202ENST00000343017 CCDC8Q9H0W5 538 aaPredicted RBP17.85■□□□□ 0.45
SNX18-202ENST00000343017 RPS6KB1P23443 525 aa17.85■□□□□ 0.45
SNX18-202ENST00000343017 GYS2P54840 703 aa17.85■□□□□ 0.45
SNX18-202ENST00000343017 PTPN21Q16825 1174 aa17.85■□□□□ 0.45
SNX18-202ENST00000343017 ARMCX5Q6P1M9 558 aa17.85■□□□□ 0.45
SNX18-202ENST00000343017 AACSQ86V21 672 aa17.85■□□□□ 0.45
SNX18-202ENST00000343017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNX18-202ENST00000343017 PI4KAP2A4QPH2 592 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 TMC6Q7Z403 805 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 HOMER1Q86YM7 354 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 PI4KAP1Q8N8J0 262 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 NFATC2IPQ8NCF5 419 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 EYA1Q99502 592 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 L2HGDHQ9H9P8 463 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 SMC2O95347 1197 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 PSMA5P28066 241 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 IL17REQ8NFR9 667 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 DNAI1Q9UI46 699 aa17.84■□□□□ 0.45
SNX18-202ENST00000343017 CHGBP05060 677 aa17.83■□□□□ 0.45
SNX18-202ENST00000343017 KCNA6P17658 529 aa17.83■□□□□ 0.45
SNX18-202ENST00000343017 CCDC93Q567U6 631 aa17.83■□□□□ 0.45
SNX18-202ENST00000343017 ZNF589Q86UQ0 364 aaPredicted RBP17.83■□□□□ 0.45
SNX18-202ENST00000343017 SMARCE1Q969G3 411 aa17.83■□□□□ 0.45
SNX18-202ENST00000343017 EDC3Q96F86 508 aaKnown RBP17.83■□□□□ 0.45
SNX18-202ENST00000343017 BOLA2Q9H3K6 86 aa17.83■□□□□ 0.45
SNX18-202ENST00000343017 GUCY1B3Q02153 619 aa17.83■□□□□ 0.44
SNX18-202ENST00000343017 ARHGEF10O15013 1369 aa17.83■□□□□ 0.44
SNX18-202ENST00000343017 MAP3K5Q99683 1374 aa17.83■□□□□ 0.44
SNX18-202ENST00000343017 XPO4Q9C0E2 1151 aaKnown RBP17.83■□□□□ 0.44
SNX18-202ENST00000343017 IFNKQ9P0W0 207 aa17.83■□□□□ 0.44
SNX18-202ENST00000343017 TTC41PQ6P2S7 1318 aa17.82■□□□□ 0.44
SNX18-202ENST00000343017 HTATSF1O43719 755 aaKnown RBP17.82■□□□□ 0.44
SNX18-202ENST00000343017 HSP90B1P14625 803 aaKnown RBP17.82■□□□□ 0.44
SNX18-202ENST00000343017 TMX1Q9H3N1 280 aa17.82■□□□□ 0.44
SNX18-202ENST00000343017 TLR7Q9NYK1 1049 aaKnown RBP17.82■□□□□ 0.44
SNX18-202ENST00000343017 KRBA2Q6ZNG9 492 aa17.82■□□□□ 0.44
SNX18-202ENST00000343017 FAM177A1Q8N128 213 aaPredicted RBP17.82■□□□□ 0.44
SNX18-202ENST00000343017 CCDC34Q96HJ3 373 aa17.82■□□□□ 0.44
SNX18-202ENST00000343017 ADAMTS13Q76LX8 1427 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 BIN1O00499 593 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 FANCGO15287 622 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
SNX18-202ENST00000343017 TMCO3Q6UWJ1 677 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 EVI5LQ96CN4 794 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 LCMT1Q9UIC8 334 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 GOLGA8FQ08AF8 430 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 GOLGA8DPQ0D2H9 430 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 UBXN4Q92575 508 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 USP28Q96RU2 1077 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 SIL1Q9H173 461 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
SNX18-202ENST00000343017 TRIM66O15016 1216 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 KINO60870 393 aaKnown RBP17.81■□□□□ 0.44
SNX18-202ENST00000343017 ZRANB2O95218 330 aaKnown RBP eCLIP17.81■□□□□ 0.44
SNX18-202ENST00000343017 ISM2Q6H9L7 571 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 ORC3Q9UBD5 711 aaPredicted RBP17.81■□□□□ 0.44
SNX18-202ENST00000343017 NDUFB9Q9Y6M9 179 aa17.81■□□□□ 0.44
SNX18-202ENST00000343017 SASH3O75995 380 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 CAVIN2O95810 425 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 FSIP1Q8NA03 581 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 SEC62Q99442 399 aaKnown RBP17.8■□□□□ 0.44
SNX18-202ENST00000343017 FSD1Q9BTV5 496 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 ANO10Q9NW15 660 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms