RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 CDHR2Q9BYE9 1310 aa9.82□□□□□ -0.84
CFAP54-201ENST00000342887 WDR19Q8NEZ3 1342 aa9.82□□□□□ -0.84
CFAP54-201ENST00000342887 SRGAP3O43295 1099 aa9.82□□□□□ -0.84
CFAP54-201ENST00000342887 MCM5P33992 734 aa9.82□□□□□ -0.84
CFAP54-201ENST00000342887 ESCO1Q5FWF5 840 aa9.82□□□□□ -0.84
CFAP54-201ENST00000342887 PLBD2Q8NHP8 589 aa9.82□□□□□ -0.84
CFAP54-201ENST00000342887 KCND1Q9NSA2 647 aa9.82□□□□□ -0.84
CFAP54-201ENST00000342887 DBNLQ9UJU6 430 aaKnown RBP9.82□□□□□ -0.84
CFAP54-201ENST00000342887 MORC2Q9Y6X9 1032 aaPredicted RBP9.82□□□□□ -0.84
CFAP54-201ENST00000342887 PRIM1P49642 420 aaKnown RBP9.81□□□□□ -0.84
CFAP54-201ENST00000342887 CASC1Q6TDU7 716 aa9.81□□□□□ -0.84
CFAP54-201ENST00000342887 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
CFAP54-201ENST00000342887 ATAD5Q96QE3 1844 aa9.81□□□□□ -0.84
CFAP54-201ENST00000342887 SLC27A2O14975 620 aa9.81□□□□□ -0.84
CFAP54-201ENST00000342887 CWF19L2Q2TBE0 894 aaKnown RBP9.81□□□□□ -0.84
CFAP54-201ENST00000342887 SPTLC3Q9NUV7 552 aa9.81□□□□□ -0.84
CFAP54-201ENST00000342887 A0A0D9SFI3 127 aa9.81□□□□□ -0.84
CFAP54-201ENST00000342887 UVSSAQ2YD98 709 aa9.81□□□□□ -0.84
CFAP54-201ENST00000342887 CNTROBQ8N137 903 aa9.81□□□□□ -0.84
CFAP54-201ENST00000342887 MBD3O95983 291 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 ZSCAN22P10073 491 aaPredicted RBP9.8□□□□□ -0.84
CFAP54-201ENST00000342887 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 NAP1L5Q96NT1 182 aaPredicted RBP9.8□□□□□ -0.84
CFAP54-201ENST00000342887 SH2B1Q9NRF2 756 aaPredicted RBP9.8□□□□□ -0.84
CFAP54-201ENST00000342887 LIMCH1Q9UPQ0 1083 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 AP5Z1O43299 807 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 ME3Q16798 604 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 CARD10Q9BWT7 1032 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 TPCN1Q9ULQ1 816 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 GTF2F1P35269 517 aaKnown RBP eCLIP9.8□□□□□ -0.84
CFAP54-201ENST00000342887 ZNF589Q86UQ0 364 aaPredicted RBP9.8□□□□□ -0.84
CFAP54-201ENST00000342887 IFNL2Q8IZJ0 200 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 CHAMP1Q96JM3 812 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 PCDH11XQ9BZA7 1347 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 PCDH11YQ9BZA8 1340 aa9.8□□□□□ -0.84
CFAP54-201ENST00000342887 F13A1P00488 732 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 SYT1P21579 422 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 NUTM2GQ5VZR2 741 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 CREB3L3Q68CJ9 461 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 LARP1Q6PKG0 1096 aaKnown RBP9.79□□□□□ -0.84
CFAP54-201ENST00000342887 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 TAF1P21675 1872 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 RPS6KB1P23443 525 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 PSME1Q06323 249 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 TNNI3KQ59H18 835 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
CFAP54-201ENST00000342887 FPGT-TNNI3KV9GXZ4 949 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 WDR33Q9C0J8 1336 aaKnown RBP9.79□□□□□ -0.84
CFAP54-201ENST00000342887 ESPNB1AK53 854 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 HIP1O00291 1037 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 GADD45BO75293 160 aaPredicted RBP9.79□□□□□ -0.84
CFAP54-201ENST00000342887 OFD1O75665 1012 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 CTDNEP1O95476 244 aa9.79□□□□□ -0.84
CFAP54-201ENST00000342887 HSP90AA1P07900 732 aaKnown RBP9.79□□□□□ -0.84
CFAP54-201ENST00000342887 SNRPA1P09661 255 aaKnown RBP9.78□□□□□ -0.84
CFAP54-201ENST00000342887 NEK4P51957 841 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 STOX1Q6ZVD7 989 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 ZSCAN31Q96LW9 406 aaPredicted RBP9.78□□□□□ -0.84
CFAP54-201ENST00000342887 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 FAM237AA0A1B0GTK4 181 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 RGL2O15211 777 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 NAV1Q8NEY1 1877 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 PSME4Q14997 1843 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 NMIQ13287 307 aaPredicted RBP9.78□□□□□ -0.84
CFAP54-201ENST00000342887 SLC4A10Q6U841 1118 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 IL1RAPL2Q9NP60 686 aa9.78□□□□□ -0.84
CFAP54-201ENST00000342887 SURF6O75683 361 aaKnown RBP9.77□□□□□ -0.84
CFAP54-201ENST00000342887 RESTQ13127 1097 aa9.77□□□□□ -0.84
CFAP54-201ENST00000342887 DSCC1Q9BVC3 393 aa9.77□□□□□ -0.84
CFAP54-201ENST00000342887 NBPF3Q9H094 633 aa9.77□□□□□ -0.84
CFAP54-201ENST00000342887 PA2G4Q9UQ80 394 aaKnown RBP9.77□□□□□ -0.84
CFAP54-201ENST00000342887 HDAC5Q9UQL6 1122 aa9.77□□□□□ -0.84
CFAP54-201ENST00000342887 IRS2Q9Y4H2 1338 aa9.77□□□□□ -0.85
CFAP54-201ENST00000342887 ZMYM1Q5SVZ6 1142 aa9.77□□□□□ -0.85
CFAP54-201ENST00000342887 USP48Q86UV5 1035 aa9.77□□□□□ -0.85
CFAP54-201ENST00000342887 FAM227BQ96M60 508 aa9.77□□□□□ -0.85
CFAP54-201ENST00000342887 SPRYD3Q8NCJ5 442 aa9.77□□□□□ -0.85
CFAP54-201ENST00000342887 SPG7Q9UQ90 795 aa9.77□□□□□ -0.85
CFAP54-201ENST00000342887 SIPA1L1O43166 1804 aa9.76□□□□□ -0.85
CFAP54-201ENST00000342887 MAP3K15Q6ZN16 1313 aa9.76□□□□□ -0.85
CFAP54-201ENST00000342887 ANXA1P04083 346 aa9.76□□□□□ -0.85
CFAP54-201ENST00000342887 GTF3C6Q969F1 213 aa9.76□□□□□ -0.85
CFAP54-201ENST00000342887 RBBP6Q7Z6E9 1792 aaKnown RBP9.76□□□□□ -0.85
CFAP54-201ENST00000342887 UBE2HP62256 183 aa9.76□□□□□ -0.85
CFAP54-201ENST00000342887 MCTP1Q6DN14 999 aa9.76□□□□□ -0.85
CFAP54-201ENST00000342887 ZSCAN30Q86W11 494 aa9.76□□□□□ -0.85
CFAP54-201ENST00000342887 SLC4A9Q96Q91 983 aa9.76□□□□□ -0.85
CFAP54-201ENST00000342887 RBM8AQ9Y5S9 174 aaKnown RBP9.76□□□□□ -0.85
CFAP54-201ENST00000342887 STX6O43752 255 aa9.75□□□□□ -0.85
CFAP54-201ENST00000342887 CADPS2Q86UW7 1296 aa9.75□□□□□ -0.85
CFAP54-201ENST00000342887 NFATC2IPQ8NCF5 419 aa9.75□□□□□ -0.85
CFAP54-201ENST00000342887 XAGE3Q8WTP9 111 aa9.75□□□□□ -0.85
CFAP54-201ENST00000342887 LLPHQ9BRT6 129 aaKnown RBP9.75□□□□□ -0.85
CFAP54-201ENST00000342887 ENGASEQ8NFI3 743 aa9.75□□□□□ -0.85
CFAP54-201ENST00000342887 HELLSQ9NRZ9 838 aa9.75□□□□□ -0.85
CFAP54-201ENST00000342887 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
CFAP54-201ENST00000342887 COL1A1P02452 1464 aaPredicted RBP9.75□□□□□ -0.85
CFAP54-201ENST00000342887 ANKRD31Q8N7Z5 1873 aa9.75□□□□□ -0.85
CFAP54-201ENST00000342887 TCRBV5S4A2TA0A5A2 114 aa9.75□□□□□ -0.85
CFAP54-201ENST00000342887 NASPP49321 788 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms