RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 EIF4A1P60842 406 aaKnown RBP18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 FSIP1Q8NA03 581 aa18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 DDX19AQ9NUU7 478 aaKnown RBP18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 PDE4BQ07343 736 aa18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 IL17REQ8NFR9 667 aa18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
CARMIL3-201ENST00000342740 ZNF76P36508 570 aa18.16■□□□□ 0.5
CARMIL3-201ENST00000342740 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
CARMIL3-201ENST00000342740 USP26Q9BXU7 913 aa18.16■□□□□ 0.5
CARMIL3-201ENST00000342740 CFAP100Q494V2 611 aa18.16■□□□□ 0.5
CARMIL3-201ENST00000342740 EFCAB6Q5THR3 1501 aa18.16■□□□□ 0.5
CARMIL3-201ENST00000342740 NLRP5P59047 1200 aa18.16■□□□□ 0.5
CARMIL3-201ENST00000342740 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 PNMA6EA0A0J9YXQ4 647 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 A1BGP04217 495 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 CTAGE5O15320 804 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 UBE2HP62256 183 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 TANGO6Q9C0B7 1094 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 CRNKL1Q9BZJ0 848 aaKnown RBP18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 TIMM10P62072 90 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 ZSCAN30Q86W11 494 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 KLHDC4Q8TBB5 520 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 SLC26A6Q9BXS9 759 aa18.15■□□□□ 0.5
CARMIL3-201ENST00000342740 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.5
CARMIL3-201ENST00000342740 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.5
CARMIL3-201ENST00000342740 CCDC194A0A1B0GVG4 234 aa18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 Q6ZUG5 572 aa18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 SLC4A4Q9Y6R1 1079 aa18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 CCDC96Q2M329 555 aa18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 SLC4A8Q2Y0W8 1093 aa18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 ZSCAN16Q9H4T2 348 aaPredicted RBP18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 RBM27Q9P2N5 1060 aaKnown RBP18.14■□□□□ 0.49
CARMIL3-201ENST00000342740 RNF113AO15541 343 aaKnown RBP18.13■□□□□ 0.49
CARMIL3-201ENST00000342740 ST5P78524 1137 aa18.13■□□□□ 0.49
CARMIL3-201ENST00000342740 PLEKHG1Q9ULL1 1385 aa18.13■□□□□ 0.49
CARMIL3-201ENST00000342740 KIF5BP33176 963 aa18.13■□□□□ 0.49
CARMIL3-201ENST00000342740 WTAPQ15007 396 aa18.13■□□□□ 0.49
CARMIL3-201ENST00000342740 CREB3L3Q68CJ9 461 aa18.13■□□□□ 0.49
CARMIL3-201ENST00000342740 ZBTB43O43298 467 aa18.13■□□□□ 0.49
CARMIL3-201ENST00000342740 EYA2O00167 538 aa18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 AK2P54819 239 aa18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 KLHL10Q6JEL2 608 aa18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 NAA16Q6N069 864 aaPredicted RBP18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 ZNF622Q969S3 477 aaKnown RBP eCLIP18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 KRT23Q9C075 422 aa18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 USP25Q9UHP3 1055 aa18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 CCDC191Q8NCU4 936 aa18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 CNNM3Q8NE01 707 aa18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 FAM177A1Q8N128 213 aaPredicted RBP18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 STX8Q9UNK0 236 aa18.12■□□□□ 0.49
CARMIL3-201ENST00000342740 ESR2Q92731 530 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 KAT14Q9H8E8 782 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 AATKQ6ZMQ8 1374 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 TRMT2AQ8IZ69 625 aaKnown RBP18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 DEF6Q9H4E7 631 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 FAM135BQ49AJ0 1406 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 ROBO2Q9HCK4 1378 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 KCNQ3O43525 872 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 GCKRQ14397 625 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 CCDC112Q8NEF3 446 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 CNNM2Q9H8M5 875 aa18.11■□□□□ 0.49
CARMIL3-201ENST00000342740 TMEM132AQ24JP5 1023 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 ODF2Q5BJF6 829 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 TMTC2Q8N394 836 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 SUCLG2Q96I99 432 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 CDCA7Q9BWT1 371 aaPredicted RBP18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 NYXQ9GZU5 481 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 ZGPATQ8N5A5 531 aaKnown RBP18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 RAD50Q92878 1312 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 DBNDD2Q9BQY9 259 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 PANK2Q9BZ23 570 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 ABCC4O15439 1325 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 ZFYVE27Q5T4F4 411 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 VAT1LQ9HCJ6 419 aa18.1■□□□□ 0.49
CARMIL3-201ENST00000342740 CCDC171Q6TFL3 1326 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 PRC1O43663 620 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 RBM25P49756 843 aaKnown RBP18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 BIN1O00499 593 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 SFPQP23246 707 aaKnown RBP eCLIP18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 GSTO1P78417 241 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 HSP90B2PQ58FF3 399 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 TNNI3KQ59H18 835 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 TEX35Q5T0J7 233 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 CHST3Q7LGC8 479 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 FPGT-TNNI3KV9GXZ4 949 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 SH3TC1Q8TE82 1336 aa18.09■□□□□ 0.49
CARMIL3-201ENST00000342740 PRIM1P49642 420 aaKnown RBP18.08■□□□□ 0.49
CARMIL3-201ENST00000342740 RUFY1Q96T51 708 aa18.08■□□□□ 0.49
CARMIL3-201ENST00000342740 ALG1Q9BT22 464 aa18.08■□□□□ 0.49
CARMIL3-201ENST00000342740 USP44Q9H0E7 712 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms