RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 PRPF40BQ6NWY9 871 aaKnown RBP27.67■■■□□ 2.02
RBM38-201ENST00000342690 PLA2G12BQ9BX93 195 aa27.67■■■□□ 2.02
RBM38-201ENST00000342690 CTSWP56202 376 aa27.66■■■□□ 2.02
RBM38-201ENST00000342690 CRAMP1Q96RY5 1269 aa27.66■■■□□ 2.02
RBM38-201ENST00000342690 DCAF8L1A6NGE4 600 aa27.65■■■□□ 2.02
RBM38-201ENST00000342690 NBPF7P0C2Y1 421 aaPredicted RBP27.65■■■□□ 2.02
RBM38-201ENST00000342690 ALDH1B1P30837 517 aa27.65■■■□□ 2.02
RBM38-201ENST00000342690 TMEM57Q8N5G2 664 aa27.65■■■□□ 2.02
RBM38-201ENST00000342690 USP44Q9H0E7 712 aa27.65■■■□□ 2.02
RBM38-201ENST00000342690 SUPT16HQ9Y5B9 1047 aaKnown RBP27.65■■■□□ 2.02
RBM38-201ENST00000342690 TAF1P21675 1872 aa27.65■■■□□ 2.02
RBM38-201ENST00000342690 COL4A1P02462 1669 aa27.65■■■□□ 2.02
RBM38-201ENST00000342690 PDE3AQ14432 1141 aa27.64■■■□□ 2.02
RBM38-201ENST00000342690 PANK1Q8TE04 598 aa27.64■■■□□ 2.02
RBM38-201ENST00000342690 RLBP1P12271 317 aa27.63■■■□□ 2.01
RBM38-201ENST00000342690 DDX46Q7L014 1031 aaKnown RBP27.63■■■□□ 2.01
RBM38-201ENST00000342690 ITPRIPQ8IWB1 547 aa27.63■■■□□ 2.01
RBM38-201ENST00000342690 SUCLG2Q96I99 432 aa27.63■■■□□ 2.01
RBM38-201ENST00000342690 CCDC85AQ96PX6 553 aaPredicted RBP27.63■■■□□ 2.01
RBM38-201ENST00000342690 CCDC152Q4G0S7 254 aa27.62■■■□□ 2.01
RBM38-201ENST00000342690 EPHA10Q5JZY3 1008 aa27.62■■■□□ 2.01
RBM38-201ENST00000342690 TTLL11Q8NHH1 800 aa27.62■■■□□ 2.01
RBM38-201ENST00000342690 ZNF219Q9P2Y4 722 aaPredicted RBP27.62■■■□□ 2.01
RBM38-201ENST00000342690 FOXO4P98177 505 aa27.61■■■□□ 2.01
RBM38-201ENST00000342690 GRAPQ13588 217 aa27.61■■■□□ 2.01
RBM38-201ENST00000342690 GRAPLQ8TC17 118 aaPredicted RBP27.61■■■□□ 2.01
RBM38-201ENST00000342690 C21orf2O43822 256 aa27.6■■■□□ 2.01
RBM38-201ENST00000342690 GRIN3BO60391 1043 aa27.6■■■□□ 2.01
RBM38-201ENST00000342690 KAZALD1Q96I82 304 aa27.6■■■□□ 2.01
RBM38-201ENST00000342690 SEC31BQ9NQW1 1179 aa27.6■■■□□ 2.01
RBM38-201ENST00000342690 PPEF1O14829 653 aaPredicted RBP27.59■■■□□ 2.01
RBM38-201ENST00000342690 CSF1RP07333 972 aa27.59■■■□□ 2.01
RBM38-201ENST00000342690 C7orf43Q8WVR3 580 aa27.59■■■□□ 2.01
RBM38-201ENST00000342690 GREM2Q9H772 168 aa27.59■■■□□ 2.01
RBM38-201ENST00000342690 RTL9Q8NET4 1388 aa27.59■■■□□ 2.01
RBM38-201ENST00000342690 C20orf194Q5TEA3 1177 aa27.58■■■□□ 2.01
RBM38-201ENST00000342690 SLC51AQ86UW1 340 aa27.58■■■□□ 2.01
RBM38-201ENST00000342690 CELF1Q92879 486 aaKnown RBP27.58■■■□□ 2.01
RBM38-201ENST00000342690 MEIS3Q99687 375 aa27.58■■■□□ 2.01
RBM38-201ENST00000342690 MVPQ14764 893 aaKnown RBP27.57■■■□□ 2
RBM38-201ENST00000342690 FAM161AQ3B820 660 aa27.57■■■□□ 2
RBM38-201ENST00000342690 UBTFL1P0CB47 393 aaPredicted RBP27.56■■■□□ 2
RBM38-201ENST00000342690 OLFM4Q6UX06 510 aa27.56■■■□□ 2
RBM38-201ENST00000342690 COG6Q9Y2V7 657 aa27.56■■■□□ 2
RBM38-201ENST00000342690 GOLGB1Q14789 3259 aaKnown RBP27.56■■■□□ 2
RBM38-201ENST00000342690 GNAI3P08754 354 aa27.55■■■□□ 2
RBM38-201ENST00000342690 LMBR1LQ6UX01 489 aa27.55■■■□□ 2
RBM38-201ENST00000342690 ARHGAP27Q6ZUM4 889 aa27.55■■■□□ 2
RBM38-201ENST00000342690 BICC1Q9H694 974 aaKnown RBP27.55■■■□□ 2
RBM38-201ENST00000342690 HDAC5Q9UQL6 1122 aa27.55■■■□□ 2
RBM38-201ENST00000342690 FER1L6Q2WGJ9 1857 aa27.55■■■□□ 2
RBM38-201ENST00000342690 LRRC37AA6NMS7 1700 aa27.54■■■□□ 2
RBM38-201ENST00000342690 BBOX1O75936 387 aa27.54■■■□□ 2
RBM38-201ENST00000342690 ANKRD44Q8N8A2 993 aa27.54■■■□□ 2
RBM38-201ENST00000342690 SPEF2Q9C093 1822 aa27.54■■■□□ 2
RBM38-201ENST00000342690 CHMP4BQ9H444 224 aaKnown RBP27.54■■■□□ 2
RBM38-201ENST00000342690 DDX19BQ9UMR2 479 aa27.54■■■□□ 2
RBM38-201ENST00000342690 SNED1Q8TER0 1413 aa27.53■■■□□ 2
RBM38-201ENST00000342690 CCDC93Q567U6 631 aa27.53■■■□□ 2
RBM38-201ENST00000342690 SOGA3Q5TF21 947 aa27.53■■■□□ 2
RBM38-201ENST00000342690 CHMP3Q9Y3E7 222 aa27.53■■■□□ 2
RBM38-201ENST00000342690 ITGA6P23229 1130 aa27.52■■■□□ 2
RBM38-201ENST00000342690 RPS8P62241 208 aaKnown RBP27.52■■■□□ 2
RBM38-201ENST00000342690 RABL6Q3YEC7 729 aaPredicted RBP27.52■■■□□ 2
RBM38-201ENST00000342690 CDC5LQ99459 802 aaKnown RBP27.52■■■□□ 2
RBM38-201ENST00000342690 ATP6V0A2Q9Y487 856 aa27.52■■■□□ 2
RBM38-201ENST00000342690 RASSF7Q02833 373 aa27.51■■□□□ 1.99
RBM38-201ENST00000342690 ANKRD18AQ8IVF6 992 aa27.51■■□□□ 1.99
RBM38-201ENST00000342690 LRRFIP2Q9Y608 721 aaKnown RBP27.51■■□□□ 1.99
RBM38-201ENST00000342690 NFKBIEO00221 500 aa27.5■■□□□ 1.99
RBM38-201ENST00000342690 TMC4Q7Z404 712 aa27.5■■□□□ 1.99
RBM38-201ENST00000342690 SP8Q8IXZ3 490 aa27.5■■□□□ 1.99
RBM38-201ENST00000342690 ANKRD18BA2A2Z9 1011 aa27.49■■□□□ 1.99
RBM38-201ENST00000342690 CC2D2BQ6DHV5 1058 aa27.49■■□□□ 1.99
RBM38-201ENST00000342690 ZBTB7BO15156 539 aaPredicted RBP27.48■■□□□ 1.99
RBM38-201ENST00000342690 IFIT5Q13325 482 aaKnown RBP27.48■■□□□ 1.99
RBM38-201ENST00000342690 CHD4Q14839 1912 aa27.47■■□□□ 1.99
RBM38-201ENST00000342690 GNAI2P04899 355 aa27.46■■□□□ 1.99
RBM38-201ENST00000342690 CCDC57Q2TAC2 916 aa27.46■■□□□ 1.99
RBM38-201ENST00000342690 RTKN2Q8IZC4 609 aa27.46■■□□□ 1.99
RBM38-201ENST00000342690 CRBNQ96SW2 442 aa27.46■■□□□ 1.99
RBM38-201ENST00000342690 SBF1O95248 1867 aa27.46■■□□□ 1.99
RBM38-201ENST00000342690 LTBP3Q9NS15 1303 aa27.45■■□□□ 1.99
RBM38-201ENST00000342690 IGHMBP2P38935 993 aaKnown RBP27.45■■□□□ 1.98
RBM38-201ENST00000342690 TMX4Q9H1E5 349 aaPredicted RBP27.45■■□□□ 1.98
RBM38-201ENST00000342690 TAOK3Q9H2K8 898 aa27.45■■□□□ 1.98
RBM38-201ENST00000342690 LTBP1Q14766 1721 aa27.44■■□□□ 1.98
RBM38-201ENST00000342690 PRELPP51888 382 aa27.44■■□□□ 1.98
RBM38-201ENST00000342690 FKBP4Q02790 459 aaKnown RBP eCLIP27.44■■□□□ 1.98
RBM38-201ENST00000342690 ZNF594Q96JF6 807 aaPredicted RBP27.44■■□□□ 1.98
RBM38-201ENST00000342690 BSDC1Q9NW68 430 aaPredicted RBP27.44■■□□□ 1.98
RBM38-201ENST00000342690 DUOX1Q9NRD9 1551 aa27.43■■□□□ 1.98
RBM38-201ENST00000342690 CCDC88AQ3V6T2 1871 aa27.42■■□□□ 1.98
RBM38-201ENST00000342690 GRIPAP1Q4V328 841 aa27.42■■□□□ 1.98
RBM38-201ENST00000342690 PSMD1Q99460 953 aa27.42■■□□□ 1.98
RBM38-201ENST00000342690 MPHOSPH8Q99549 860 aa27.42■■□□□ 1.98
RBM38-201ENST00000342690 GPSM2P81274 684 aa27.41■■□□□ 1.98
RBM38-201ENST00000342690 TAF7LQ5H9L4 462 aa27.41■■□□□ 1.98
RBM38-201ENST00000342690 MPNDQ8N594 471 aa27.41■■□□□ 1.98
RBM38-201ENST00000342690 C1orf115Q9H7X2 142 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms