RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ZCCHC17Q9NP64 241 aaKnown RBP21.6■■□□□ 1.05
SMPD1-201ENST00000342245 DONSONQ9NYP3 566 aa21.6■■□□□ 1.05
SMPD1-201ENST00000342245 PREX1Q8TCU6 1659 aa21.6■■□□□ 1.05
SMPD1-201ENST00000342245 CAMSAP1Q5T5Y3 1602 aa21.6■■□□□ 1.05
SMPD1-201ENST00000342245 SMC2O95347 1197 aa21.6■■□□□ 1.05
SMPD1-201ENST00000342245 RASEFQ8IZ41 740 aa21.6■■□□□ 1.05
SMPD1-201ENST00000342245 SEC31AO94979 1220 aaKnown RBP21.59■■□□□ 1.05
SMPD1-201ENST00000342245 CT47A1Q5JQC4 288 aaPredicted RBP21.59■■□□□ 1.05
SMPD1-201ENST00000342245 CEP57L1Q8IYX8 460 aa21.59■■□□□ 1.05
SMPD1-201ENST00000342245 CEP89Q96ST8 783 aa21.59■■□□□ 1.05
SMPD1-201ENST00000342245 EVCP57679 992 aa21.58■■□□□ 1.05
SMPD1-201ENST00000342245 CDC37L1Q7L3B6 337 aa21.58■■□□□ 1.05
SMPD1-201ENST00000342245 UNC5CLQ8IV45 518 aa21.58■■□□□ 1.05
SMPD1-201ENST00000342245 KCNB2Q92953 911 aa21.58■■□□□ 1.05
SMPD1-201ENST00000342245 TOMM22Q9NS69 142 aa21.58■■□□□ 1.05
SMPD1-201ENST00000342245 CLTCQ00610 1675 aaKnown RBP21.58■■□□□ 1.05
SMPD1-201ENST00000342245 GNAI3P08754 354 aa21.58■■□□□ 1.05
SMPD1-201ENST00000342245 CORO7P57737 925 aa21.58■■□□□ 1.05
SMPD1-201ENST00000342245 EIF3CLB5ME19 914 aaKnown RBP21.57■■□□□ 1.04
SMPD1-201ENST00000342245 ATP8B2P98198 1209 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 IDI1Q13907 227 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 ZRSR1Q15695 479 aaKnown RBP21.57■■□□□ 1.04
SMPD1-201ENST00000342245 MCTP2Q6DN12 878 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 C11orf57Q6ZUT1 292 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-201ENST00000342245 RPAINQ86UA6 219 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 DHX40Q8IX18 779 aaKnown RBP21.57■■□□□ 1.04
SMPD1-201ENST00000342245 CNTROBQ8N137 903 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 RUFY2Q8WXA3 655 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 EIF3CQ99613 913 aaKnown RBP21.57■■□□□ 1.04
SMPD1-201ENST00000342245 FUT8Q9BYC5 575 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 PSME1Q06323 249 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 RABGGTAQ92696 567 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 FAM107BQ9H098 131 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 CFAP45Q9UL16 551 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 ARHGEF10O15013 1369 aa21.57■■□□□ 1.04
SMPD1-201ENST00000342245 HMOX1P09601 288 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 BRD3Q15059 726 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 EFCAB13Q8IY85 973 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 GPATCH11Q8N954 259 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 MPHOSPH8Q99549 860 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 IL25Q9H293 177 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 ANKRD1Q15327 319 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 MMS22LQ6ZRQ5 1243 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 FCHSD1Q86WN1 690 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 STK26Q9P289 416 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 SETD1AO15047 1707 aaKnown RBP21.56■■□□□ 1.04
SMPD1-201ENST00000342245 NEXMIFQ5QGS0 1516 aa21.56■■□□□ 1.04
SMPD1-201ENST00000342245 ME3Q16798 604 aa21.55■■□□□ 1.04
SMPD1-201ENST00000342245 GORABQ5T7V8 394 aa21.55■■□□□ 1.04
SMPD1-201ENST00000342245 LARP6Q9BRS8 491 aaKnown RBP21.55■■□□□ 1.04
SMPD1-201ENST00000342245 CXorf56Q9H5V9 222 aa21.55■■□□□ 1.04
SMPD1-201ENST00000342245 CCDC151A5D8V7 595 aa21.55■■□□□ 1.04
SMPD1-201ENST00000342245 URI1O94763 535 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-201ENST00000342245 CEP120Q8N960 986 aa21.55■■□□□ 1.04
SMPD1-201ENST00000342245 PGBD1Q96JS3 809 aa21.55■■□□□ 1.04
SMPD1-201ENST00000342245 JAKMIP1Q96N16 626 aaKnown RBP21.55■■□□□ 1.04
SMPD1-201ENST00000342245 CARD6Q9BX69 1037 aa21.55■■□□□ 1.04
SMPD1-201ENST00000342245 RAB11FIP3O75154 756 aa21.54■■□□□ 1.04
SMPD1-201ENST00000342245 EIF3JO75822 258 aaKnown RBP21.54■■□□□ 1.04
SMPD1-201ENST00000342245 NBPF11Q86T75 865 aa21.54■■□□□ 1.04
SMPD1-201ENST00000342245 FERMT3Q86UX7 667 aa21.54■■□□□ 1.04
SMPD1-201ENST00000342245 CCDC34Q96HJ3 373 aa21.54■■□□□ 1.04
SMPD1-201ENST00000342245 DIP2CQ9Y2E4 1556 aa21.54■■□□□ 1.04
SMPD1-201ENST00000342245 MAP2K7O14733 419 aa21.54■■□□□ 1.04
SMPD1-201ENST00000342245 ST3GAL1Q11201 340 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 PIK3C2BO00750 1634 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 GOLGA6L9A6NEM1 432 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 CHL1O00533 1208 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 ZSCAN12O43309 604 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 IL13P35225 146 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 HNRNPLLQ8WVV9 542 aaKnown RBP21.53■■□□□ 1.04
SMPD1-201ENST00000342245 BPIFA3Q9BQP9 254 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 CARD10Q9BWT7 1032 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 ZSCAN16Q9H4T2 348 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-201ENST00000342245 MED4Q9NPJ6 270 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 STAG3Q9UJ98 1225 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 NEO1Q92859 1461 aa21.53■■□□□ 1.04
SMPD1-201ENST00000342245 ZKSCAN1P17029 563 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-201ENST00000342245 TFIP11Q9UBB9 837 aaKnown RBP21.52■■□□□ 1.04
SMPD1-201ENST00000342245 PARP3Q9Y6F1 533 aa21.52■■□□□ 1.04
SMPD1-201ENST00000342245 PRR29P0C7W0 189 aa21.52■■□□□ 1.04
SMPD1-201ENST00000342245 PSMA5P28066 241 aa21.52■■□□□ 1.04
SMPD1-201ENST00000342245 TUBB4BP68371 445 aa21.52■■□□□ 1.04
SMPD1-201ENST00000342245 ARMCX5Q6P1M9 558 aa21.52■■□□□ 1.04
SMPD1-201ENST00000342245 TRIM65Q6PJ69 517 aa21.52■■□□□ 1.04
SMPD1-201ENST00000342245 RSRC2Q7L4I2 434 aaKnown RBP21.52■■□□□ 1.04
SMPD1-201ENST00000342245 ALDH8A1Q9H2A2 487 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-201ENST00000342245 POTEB2H3BUK9 544 aa21.51■■□□□ 1.03
SMPD1-201ENST00000342245 SRGAP3O43295 1099 aa21.51■■□□□ 1.03
SMPD1-201ENST00000342245 PRAM1Q96QH2 718 aa21.51■■□□□ 1.03
SMPD1-201ENST00000342245 CCDC196A0A1B0GTZ2 297 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 LONRF2Q1L5Z9 754 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 GOLGA1Q92805 767 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 CRYBG1Q9Y4K1 1723 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 SLC4A2P04920 1241 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 USP8P40818 1118 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 FAM173BQ6P4H8 233 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 CCDC73Q6ZRK6 1079 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 TMC6Q7Z403 805 aa21.5■■□□□ 1.03
SMPD1-201ENST00000342245 KINO60870 393 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms