RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 GPC2Q8N158 579 aa25.88■■□□□ 1.73
SYNE2-201ENST00000341472 DNAJC5GQ8N7S2 189 aa25.88■■□□□ 1.73
SYNE2-201ENST00000341472 PI4KAP1Q8N8J0 262 aa25.88■■□□□ 1.73
SYNE2-201ENST00000341472 RTFDC1Q9BY42 306 aaPredicted RBP25.88■■□□□ 1.73
SYNE2-201ENST00000341472 FANCIQ9NVI1 1328 aa25.88■■□□□ 1.73
SYNE2-201ENST00000341472 PCCAP05165 728 aaPredicted RBP25.87■■□□□ 1.73
SYNE2-201ENST00000341472 CHADLQ6NUI6 762 aa25.87■■□□□ 1.73
SYNE2-201ENST00000341472 NIM1KQ8IY84 436 aa25.87■■□□□ 1.73
SYNE2-201ENST00000341472 HACL1Q9UJ83 578 aa25.87■■□□□ 1.73
SYNE2-201ENST00000341472 GJA3Q9Y6H8 435 aa25.87■■□□□ 1.73
SYNE2-201ENST00000341472 CCDC88AQ3V6T2 1871 aa25.85■■□□□ 1.73
SYNE2-201ENST00000341472 VAMP4O75379 141 aa25.85■■□□□ 1.73
SYNE2-201ENST00000341472 HTRA3P83110 453 aa25.85■■□□□ 1.73
SYNE2-201ENST00000341472 NEXNQ0ZGT2 675 aa25.85■■□□□ 1.73
SYNE2-201ENST00000341472 AOC3Q16853 763 aa25.85■■□□□ 1.73
SYNE2-201ENST00000341472 G2E3Q7L622 706 aa25.85■■□□□ 1.73
SYNE2-201ENST00000341472 JARID2Q92833 1246 aaPredicted RBP25.85■■□□□ 1.73
SYNE2-201ENST00000341472 CELF1Q92879 486 aaKnown RBP25.85■■□□□ 1.73
SYNE2-201ENST00000341472 RPS8P62241 208 aaKnown RBP25.84■■□□□ 1.73
SYNE2-201ENST00000341472 EXOSC9Q06265 439 aaKnown RBP25.84■■□□□ 1.73
SYNE2-201ENST00000341472 POTEIP0CG38 1075 aa25.83■■□□□ 1.73
SYNE2-201ENST00000341472 POTEJP0CG39 1038 aa25.83■■□□□ 1.73
SYNE2-201ENST00000341472 LDHDQ86WU2 507 aa25.83■■□□□ 1.73
SYNE2-201ENST00000341472 MYH16Q9H6N6 1097 aa25.83■■□□□ 1.73
SYNE2-201ENST00000341472 CACNA1SQ13698 1873 aa25.83■■□□□ 1.72
SYNE2-201ENST00000341472 WDR90Q96KV7 1748 aa25.83■■□□□ 1.72
SYNE2-201ENST00000341472 PDE8AO60658 829 aa25.82■■□□□ 1.72
SYNE2-201ENST00000341472 EPHX2P34913 555 aa25.82■■□□□ 1.72
SYNE2-201ENST00000341472 EAPPQ56P03 285 aaPredicted RBP25.82■■□□□ 1.72
SYNE2-201ENST00000341472 ZNRF3Q9ULT6 936 aa25.82■■□□□ 1.72
SYNE2-201ENST00000341472 NSFL1CQ9UNZ2 370 aaKnown RBP25.82■■□□□ 1.72
SYNE2-201ENST00000341472 TIAM2Q8IVF5 1701 aa25.82■■□□□ 1.72
SYNE2-201ENST00000341472 IGKV5-2P06315 115 aa25.81■■□□□ 1.72
SYNE2-201ENST00000341472 CCDC152Q4G0S7 254 aa25.81■■□□□ 1.72
SYNE2-201ENST00000341472 PNMA8AQ86V59 439 aaPredicted RBP25.81■■□□□ 1.72
SYNE2-201ENST00000341472 SPINK5Q9NQ38 1064 aaPredicted RBP25.81■■□□□ 1.72
SYNE2-201ENST00000341472 CLEC11AQ9Y240 323 aa25.81■■□□□ 1.72
SYNE2-201ENST00000341472 KIAA2012Q0VF49 1180 aa25.8■■□□□ 1.72
SYNE2-201ENST00000341472 FLIIQ13045 1269 aa25.8■■□□□ 1.72
SYNE2-201ENST00000341472 DICER1Q9UPY3 1922 aaKnown RBP25.8■■□□□ 1.72
SYNE2-201ENST00000341472 LMOD1P29536 600 aaPredicted RBP25.79■■□□□ 1.72
SYNE2-201ENST00000341472 SEC31BQ9NQW1 1179 aa25.79■■□□□ 1.72
SYNE2-201ENST00000341472 CXCL9Q07325 125 aa25.78■■□□□ 1.72
SYNE2-201ENST00000341472 FKBP5Q13451 457 aaPredicted RBP25.78■■□□□ 1.72
SYNE2-201ENST00000341472 KLRG1Q96E93 195 aa25.78■■□□□ 1.72
SYNE2-201ENST00000341472 NEURL1BA8MQ27 555 aa25.77■■□□□ 1.72
SYNE2-201ENST00000341472 GPSM2P81274 684 aa25.77■■□□□ 1.72
SYNE2-201ENST00000341472 CWF19L2Q2TBE0 894 aaKnown RBP25.77■■□□□ 1.72
SYNE2-201ENST00000341472 CCDC85AQ96PX6 553 aaPredicted RBP25.77■■□□□ 1.72
SYNE2-201ENST00000341472 ANKRD36CQ5JPF3 1778 aa25.77■■□□□ 1.72
SYNE2-201ENST00000341472 C6orf229H3BNL8 230 aa25.76■■□□□ 1.71
SYNE2-201ENST00000341472 WASHC4Q2M389 1173 aa25.76■■□□□ 1.71
SYNE2-201ENST00000341472 CDHR2Q9BYE9 1310 aa25.76■■□□□ 1.71
SYNE2-201ENST00000341472 H7C1W4 665 aa25.75■■□□□ 1.71
SYNE2-201ENST00000341472 DNAAF4Q8WXU2 420 aa25.75■■□□□ 1.71
SYNE2-201ENST00000341472 COL4A5P29400 1685 aa25.74■■□□□ 1.71
SYNE2-201ENST00000341472 EPS15P42566 896 aa25.74■■□□□ 1.71
SYNE2-201ENST00000341472 SCNN1DP51172 638 aa25.74■■□□□ 1.71
SYNE2-201ENST00000341472 TNIP1Q15025 636 aa25.74■■□□□ 1.71
SYNE2-201ENST00000341472 CIAPIN1Q6FI81 312 aa25.74■■□□□ 1.71
SYNE2-201ENST00000341472 POLLQ9UGP5 575 aa25.74■■□□□ 1.71
SYNE2-201ENST00000341472 RIMBP2O15034 1052 aa25.73■■□□□ 1.71
SYNE2-201ENST00000341472 RAD17O75943 681 aa25.73■■□□□ 1.71
SYNE2-201ENST00000341472 EYA3Q99504 573 aa25.73■■□□□ 1.71
SYNE2-201ENST00000341472 CTSWP56202 376 aa25.72■■□□□ 1.71
SYNE2-201ENST00000341472 GCKRQ14397 625 aa25.72■■□□□ 1.71
SYNE2-201ENST00000341472 ANKRD18AQ8IVF6 992 aa25.72■■□□□ 1.71
SYNE2-201ENST00000341472 LINS1Q8NG48 757 aa25.72■■□□□ 1.71
SYNE2-201ENST00000341472 TTLL11Q8NHH1 800 aa25.72■■□□□ 1.71
SYNE2-201ENST00000341472 TBC1D16Q8TBP0 767 aa25.72■■□□□ 1.71
SYNE2-201ENST00000341472 ITGBL1O95965 494 aaPredicted RBP25.71■■□□□ 1.71
SYNE2-201ENST00000341472 UBE3BQ7Z3V4 1068 aa25.71■■□□□ 1.71
SYNE2-201ENST00000341472 CNTROBQ8N137 903 aa25.71■■□□□ 1.71
SYNE2-201ENST00000341472 ANKIB1Q9P2G1 1089 aa25.71■■□□□ 1.71
SYNE2-201ENST00000341472 GMPSP49915 693 aaPredicted RBP25.7■■□□□ 1.7
SYNE2-201ENST00000341472 MAP1SQ66K74 1059 aaPredicted RBP25.7■■□□□ 1.7
SYNE2-201ENST00000341472 USP50Q70EL3 339 aaPredicted RBP25.7■■□□□ 1.7
SYNE2-201ENST00000341472 CDC5LQ99459 802 aaKnown RBP25.7■■□□□ 1.7
SYNE2-201ENST00000341472 BCL2L13Q9BXK5 485 aa25.7■■□□□ 1.7
SYNE2-201ENST00000341472 ZC3H12CQ9C0D7 883 aaKnown RBP25.7■■□□□ 1.7
SYNE2-201ENST00000341472 PODXL2Q9NZ53 605 aa25.7■■□□□ 1.7
SYNE2-201ENST00000341472 GPRC5DQ9NZD1 345 aa25.7■■□□□ 1.7
SYNE2-201ENST00000341472 ZNF521Q96K83 1311 aa25.69■■□□□ 1.7
SYNE2-201ENST00000341472 CREBZFQ9NS37 354 aa25.69■■□□□ 1.7
SYNE2-201ENST00000341472 PASKQ96RG2 1323 aa25.68■■□□□ 1.7
SYNE2-201ENST00000341472 YDJCA8MPS7 323 aa25.68■■□□□ 1.7
SYNE2-201ENST00000341472 JMYQ8N9B5 988 aa25.68■■□□□ 1.7
SYNE2-201ENST00000341472 DBNDD1Q9H9R9 158 aa25.68■■□□□ 1.7
SYNE2-201ENST00000341472 ADARB2Q9NS39 739 aaKnown RBP25.68■■□□□ 1.7
SYNE2-201ENST00000341472 GGA1Q9UJY5 639 aa25.68■■□□□ 1.7
SYNE2-201ENST00000341472 DOK7Q18PE1 504 aa25.67■■□□□ 1.7
SYNE2-201ENST00000341472 GREM2Q9H772 168 aa25.67■■□□□ 1.7
SYNE2-201ENST00000341472 F6X3S4 739 aa25.66■■□□□ 1.7
SYNE2-201ENST00000341472 G3V3G9 751 aa25.66■■□□□ 1.7
SYNE2-201ENST00000341472 UFL1O94874 794 aa25.66■■□□□ 1.7
SYNE2-201ENST00000341472 DCAF8Q5TAQ9 597 aa25.66■■□□□ 1.7
SYNE2-201ENST00000341472 GPR101Q96P66 508 aaPredicted RBP25.66■■□□□ 1.7
SYNE2-201ENST00000341472 PLA2G12BQ9BX93 195 aa25.66■■□□□ 1.7
SYNE2-201ENST00000341472 BSDC1Q9NW68 430 aaPredicted RBP25.65■■□□□ 1.7
SYNE2-201ENST00000341472 DDX60Q8IY21 1712 aaKnown RBP25.64■■□□□ 1.7
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