RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 KLHL40Q2TBA0 621 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 SH2D4AQ9H788 454 aa8.9□□□□□ -0.98
ATP2B4-201ENST00000341360 GRM8O00222 908 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 GSDMDP57764 484 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 SPAG1Q07617 926 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 TMEM67Q5HYA8 995 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 KIAA1328Q86T90 577 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 FMNL3Q8IVF7 1028 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 USHBP1Q8N6Y0 703 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 THUMPD2Q9BTF0 503 aaKnown RBP8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 MBIPQ9NS73 344 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 RTCBQ9Y3I0 505 aaKnown RBP8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 SYNMO15061 1565 aa8.9□□□□□ -0.99
ATP2B4-201ENST00000341360 CALML3P27482 149 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 ADCY10Q96PN6 1610 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 MAP3K5Q99683 1374 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 MAP4K4O95819 1239 aaPredicted RBP8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 KCNA6P17658 529 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 CFAP100Q494V2 611 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 FERMT2Q96AC1 680 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 CCDC85AQ96PX6 553 aaPredicted RBP8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 NEK1Q96PY6 1258 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 PCDHB15Q9Y5E8 787 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 MAST3O60307 1309 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 UBA7P41226 1012 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 LEKR1Q6ZMV7 388 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 CACNA2D4Q7Z3S7 1137 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 RHPN1Q8TCX5 695 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 IP6K1Q92551 441 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 ABCC1P33527 1531 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 CLASP1Q7Z460 1538 aa8.89□□□□□ -0.99
ATP2B4-201ENST00000341360 RTL9Q8NET4 1388 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 GPTP24298 496 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 TNNI2P48788 182 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 TERF1P54274 439 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 ANKRD44Q8N8A2 993 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 DDX11Q96FC9 970 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 CCDC8Q9H0W5 538 aaPredicted RBP8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 MIS18AQ9NYP9 233 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 LAMC1P11047 1609 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 LRRIQ1Q96JM4 1722 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 RBM25P49756 843 aaKnown RBP8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 IFI16Q16666 785 aaKnown RBP8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 AXDND1Q5T1B0 1012 aaPredicted RBP8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 PLVAPQ9BX97 442 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 GLT8D2Q9H1C3 349 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 MAST1Q9Y2H9 1570 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 YEATS4O95619 227 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 METAP2P50579 478 aaKnown RBP eCLIP8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 ZNF622Q969S3 477 aaKnown RBP eCLIP8.88□□□□□ -0.991e-6■■□□□ 13.9
ATP2B4-201ENST00000341360 PARP3Q9Y6F1 533 aa8.88□□□□□ -0.99
ATP2B4-201ENST00000341360 H0YHG0 523 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 PDE6BP35913 854 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 NUCB1Q02818 461 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 WTAPQ15007 396 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 EHBP1Q8NDI1 1231 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 LRRC45Q96CN5 670 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 ZC3H12CQ9C0D7 883 aaKnown RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 TAOK3Q9H2K8 898 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 USP16Q9Y5T5 823 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 CFAP74Q9C0B2 1584 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 CROCC2H7BZ55 1655 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 ATP8B2P98198 1209 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 TTLL5Q6EMB2 1281 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 CNNM3Q8NE01 707 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 EDC4Q6P2E9 1401 aaKnown RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 TRAPPC8Q9Y2L5 1435 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 POTEB2H3BUK9 544 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 TTC22Q5TAA0 569 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 APBB1IPQ7Z5R6 666 aaPredicted RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 SEPT11Q9NVA2 429 aaKnown RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 ORC3Q9UBD5 711 aaPredicted RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 YTHDC2Q9H6S0 1430 aaKnown RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 ANKRD62A6NC57 917 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 F6X3S4 739 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 KDM4AO75164 1064 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 PPP1R2P41236 205 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 RAB3GAP1Q15042 981 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 NAA16Q6N069 864 aaPredicted RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 PAXIP1Q6ZW49 1069 aaPredicted RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 XAGE3Q8WTP9 111 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 ARID3AQ99856 593 aa8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 NAA15Q9BXJ9 866 aaKnown RBP8.87□□□□□ -0.99
ATP2B4-201ENST00000341360 KIF5CO60282 957 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 PAFAH1B1P43034 410 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 CCDC91Q7Z6B0 441 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 KCNG4Q8TDN1 519 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 TRPM1Q7Z4N2 1603 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 SBNO1A3KN83 1393 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 GCP02774 474 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 CCDC102BQ68D86 513 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 TMEM87AQ8NBN3 555 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 RRAGDQ9NQL2 400 aaPredicted RBP8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 TBCAO75347 108 aaKnown RBP8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 TUBB4AP04350 444 aa8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 TOP1P11387 765 aaKnown RBP8.86□□□□□ -0.99
ATP2B4-201ENST00000341360 UVSSAQ2YD98 709 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms