RNA–Protein interactions for RNA: ENST00000341329.7

RHBDD1-201, Transcript of rhomboid domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD1, Length 4,883 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-201ENST00000341329 CLASP1Q7Z460 1538 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 CREB3L3Q68CJ9 461 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 USO1O60763 962 aaKnown RBP13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 SYKP43405 635 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 CCDC186Q7Z3E2 898 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 KRT23Q9C075 422 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 MTMR7Q9Y216 660 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 SKILP12757 684 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 SPAG1Q07617 926 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 BRAPQ7Z569 592 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 NECAB1Q8N987 351 aa13.91□□□□□ -0.18
RHBDD1-201ENST00000341329 TMEM67Q5HYA8 995 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 KRT222Q8N1A0 295 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 FBLN1P23142 703 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 NMIQ13287 307 aaPredicted RBP13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 KRT28Q7Z3Y7 464 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 TSG101Q99816 390 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 LARP6Q9BRS8 491 aaKnown RBP13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 SYT1P21579 422 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 RMND1Q9NWS8 449 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 MYO5CQ9NQX4 1742 aa13.9□□□□□ -0.18
RHBDD1-201ENST00000341329 KIF5BP33176 963 aa13.9□□□□□ -0.19
RHBDD1-201ENST00000341329 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.19
RHBDD1-201ENST00000341329 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.19
RHBDD1-201ENST00000341329 FOXO3O43524 673 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 Q6ZUG5 572 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 TRMT1Q9NXH9 659 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 ATP10AO60312 1499 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 LLPHQ9BRT6 129 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 GOLGA6L7A0A1B0GV03 622 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 PTCD1O75127 700 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 AMPD3Q01432 767 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 ABCF2Q9UG63 623 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 SEC63Q9UGP8 760 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 TRMT112Q9UI30 125 aaKnown RBP13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 MFSD6Q6ZSS7 791 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 EYA1Q99502 592 aa13.89□□□□□ -0.19
RHBDD1-201ENST00000341329 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
RHBDD1-201ENST00000341329 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
RHBDD1-201ENST00000341329 FEZ1Q99689 392 aa13.88□□□□□ -0.19
RHBDD1-201ENST00000341329 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.88□□□□□ -0.196e-6■□□□□ 8.1
RHBDD1-201ENST00000341329 ARHGEF10O15013 1369 aa13.88□□□□□ -0.19
RHBDD1-201ENST00000341329 PPP1R12BO60237 982 aaPredicted RBP13.88□□□□□ -0.19
RHBDD1-201ENST00000341329 UBASH3AP57075 661 aa13.88□□□□□ -0.19
RHBDD1-201ENST00000341329 XAGE3Q8WTP9 111 aa13.88□□□□□ -0.19
RHBDD1-201ENST00000341329 TM6SF1Q9BZW5 370 aa13.88□□□□□ -0.19
RHBDD1-201ENST00000341329 CCDC178Q5BJE1 867 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 TUBBP07437 444 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 PAFAH1B1P43034 410 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 TMEM266Q2M3C6 531 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 NUP88Q99567 741 aaPredicted RBP13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 CCDC194A0A1B0GVG4 234 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 SHTN1A0MZ66 631 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 MINDY4BA8MYZ0 360 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 SGSM2O43147 1006 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 ZBTB43O43298 467 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 SLU7O95391 586 aaKnown RBP13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 PRKCSHP14314 528 aaPredicted RBP13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 CCDC94Q9BW85 323 aaPredicted RBP13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 HELLSQ9NRZ9 838 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 RBSNQ9H1K0 784 aa13.87□□□□□ -0.19
RHBDD1-201ENST00000341329 MAP3K19Q56UN5 1328 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 DDX46Q7L014 1031 aaKnown RBP13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 COPS6Q7L5N1 327 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 PAG1Q9NWQ8 432 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 TBX22Q9Y458 520 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 CFAP74Q9C0B2 1584 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 SPTLC2O15270 562 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 POLR3DP05423 398 aaPredicted RBP13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 NLRP5P59047 1200 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 CDC5LQ99459 802 aaKnown RBP13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 DNAJC25Q9H1X3 360 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 DDX21Q9NR30 783 aaKnown RBP eCLIP13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 SLF2Q8IX21 1173 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 IP6K1Q92551 441 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 CCDC85AQ96PX6 553 aaPredicted RBP13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 ALG1Q9BT22 464 aa13.86□□□□□ -0.19
RHBDD1-201ENST00000341329 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
RHBDD1-201ENST00000341329 SAMD9LQ8IVG5 1584 aa13.85□□□□□ -0.19
RHBDD1-201ENST00000341329 BIN1O00499 593 aa13.85□□□□□ -0.19
RHBDD1-201ENST00000341329 RNF113AO15541 343 aaKnown RBP13.85□□□□□ -0.19
RHBDD1-201ENST00000341329 STK11IPQ8N1F8 1099 aa13.85□□□□□ -0.19
RHBDD1-201ENST00000341329 ALS2CR12Q96Q35 445 aa13.85□□□□□ -0.19
RHBDD1-201ENST00000341329 PPP1R9BQ96SB3 815 aa13.85□□□□□ -0.19
RHBDD1-201ENST00000341329 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
RHBDD1-201ENST00000341329 TCP11L1Q9NUJ3 509 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms