RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 GDPD2Q9HCC8 539 aa24.12■■□□□ 1.45
SPG7-202ENST00000341316 CHMP3Q9Y3E7 222 aa24.12■■□□□ 1.45
SPG7-202ENST00000341316 TNS2Q63HR2 1409 aa24.11■■□□□ 1.45
SPG7-202ENST00000341316 EVA1CP58658 441 aa24.11■■□□□ 1.45
SPG7-202ENST00000341316 ZKSCAN1P17029 563 aaPredicted RBP24.1■■□□□ 1.45
SPG7-202ENST00000341316 ST3GAL1Q11201 340 aa24.1■■□□□ 1.45
SPG7-202ENST00000341316 RBSNQ9H1K0 784 aa24.1■■□□□ 1.45
SPG7-202ENST00000341316 ATG9AQ7Z3C6 839 aa24.1■■□□□ 1.45
SPG7-202ENST00000341316 CCDC83Q8IWF9 413 aa24.1■■□□□ 1.45
SPG7-202ENST00000341316 TJP1Q07157 1748 aa24.1■■□□□ 1.45
SPG7-202ENST00000341316 ZSCAN30Q86W11 494 aa24.09■■□□□ 1.45
SPG7-202ENST00000341316 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.09■■□□□ 1.45
SPG7-202ENST00000341316 SYT1P21579 422 aa24.09■■□□□ 1.45
SPG7-202ENST00000341316 PRIM1P49642 420 aaKnown RBP24.09■■□□□ 1.45
SPG7-202ENST00000341316 JCADQ9P266 1359 aa24.09■■□□□ 1.45
SPG7-202ENST00000341316 ME3Q16798 604 aa24.08■■□□□ 1.45
SPG7-202ENST00000341316 SMC3Q9UQE7 1217 aa24.08■■□□□ 1.45
SPG7-202ENST00000341316 CCDC9Q9Y3X0 531 aaKnown RBP24.08■■□□□ 1.45
SPG7-202ENST00000341316 TOGARAM1Q9Y4F4 1720 aa24.08■■□□□ 1.45
SPG7-202ENST00000341316 TAF5LO75529 589 aa24.08■■□□□ 1.44
SPG7-202ENST00000341316 DNAJC2Q99543 621 aaKnown RBP24.08■■□□□ 1.44
SPG7-202ENST00000341316 HAUS7Q99871 368 aa24.07■■□□□ 1.44
SPG7-202ENST00000341316 TPCN1Q9ULQ1 816 aa24.07■■□□□ 1.44
SPG7-202ENST00000341316 STX6O43752 255 aa24.07■■□□□ 1.44
SPG7-202ENST00000341316 GADD45BO75293 160 aaPredicted RBP24.07■■□□□ 1.44
SPG7-202ENST00000341316 ZSCAN22P10073 491 aaPredicted RBP24.07■■□□□ 1.44
SPG7-202ENST00000341316 MBD3O95983 291 aa24.06■■□□□ 1.44
SPG7-202ENST00000341316 USP48Q86UV5 1035 aa24.06■■□□□ 1.44
SPG7-202ENST00000341316 NECAB1Q8N987 351 aa24.06■■□□□ 1.44
SPG7-202ENST00000341316 CCDC191Q8NCU4 936 aa24.06■■□□□ 1.44
SPG7-202ENST00000341316 TCEANC2Q96MN5 208 aa24.06■■□□□ 1.44
SPG7-202ENST00000341316 SEC62Q99442 399 aaKnown RBP24.06■■□□□ 1.44
SPG7-202ENST00000341316 ZNF609O15014 1411 aa24.05■■□□□ 1.44
SPG7-202ENST00000341316 ZNF594Q96JF6 807 aaPredicted RBP24.05■■□□□ 1.44
SPG7-202ENST00000341316 SYCE3A1L190 88 aa24.05■■□□□ 1.44
SPG7-202ENST00000341316 GJB2P29033 226 aa24.05■■□□□ 1.44
SPG7-202ENST00000341316 CCDC129Q6ZRS4 1044 aa24.05■■□□□ 1.44
SPG7-202ENST00000341316 DDX46Q7L014 1031 aaKnown RBP24.05■■□□□ 1.44
SPG7-202ENST00000341316 ZSCAN31Q96LW9 406 aaPredicted RBP24.05■■□□□ 1.44
SPG7-202ENST00000341316 TMOD3Q9NYL9 352 aa24.05■■□□□ 1.44
SPG7-202ENST00000341316 TIMM10P62072 90 aa24.04■■□□□ 1.44
SPG7-202ENST00000341316 LRRC24Q50LG9 513 aa24.04■■□□□ 1.44
SPG7-202ENST00000341316 SH2B1Q9NRF2 756 aaPredicted RBP24.04■■□□□ 1.44
SPG7-202ENST00000341316 ASAP1Q9ULH1 1129 aa24.04■■□□□ 1.44
SPG7-202ENST00000341316 CNPY2Q9Y2B0 182 aa24.03■■□□□ 1.44
SPG7-202ENST00000341316 PSMA5P28066 241 aa24.03■■□□□ 1.44
SPG7-202ENST00000341316 RNF20Q5VTR2 975 aa24.03■■□□□ 1.44
SPG7-202ENST00000341316 USPL1Q5W0Q7 1092 aa24.03■■□□□ 1.44
SPG7-202ENST00000341316 PIGBQ92521 554 aa24.03■■□□□ 1.44
SPG7-202ENST00000341316 NEUROD6Q96NK8 337 aa24.03■■□□□ 1.44
SPG7-202ENST00000341316 MSNP26038 577 aaKnown RBP24.02■■□□□ 1.44
SPG7-202ENST00000341316 ISCA1Q9BUE6 129 aa24.02■■□□□ 1.44
SPG7-202ENST00000341316 ZNF330Q9Y3S2 320 aaPredicted RBP24.02■■□□□ 1.44
SPG7-202ENST00000341316 RPS6KB1P23443 525 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 SLFNL1Q499Z3 407 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 BLOC1S2Q6QNY1 142 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 DNAJC10Q8IXB1 793 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 NHSL1Q5SYE7 1610 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 F13A1P00488 732 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 TSGA10IPQ3SY00 556 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 LRSAM1Q6UWE0 723 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 PUS3Q9BZE2 481 aaKnown RBP24.01■■□□□ 1.43
SPG7-202ENST00000341316 BTG4Q9NY30 223 aa24.01■■□□□ 1.43
SPG7-202ENST00000341316 RFX7Q2KHR2 1363 aa24■■□□□ 1.43
SPG7-202ENST00000341316 IL15P40933 162 aaPredicted RBP24■■□□□ 1.43
SPG7-202ENST00000341316 TOB2Q14106 344 aaPredicted RBP24■■□□□ 1.43
SPG7-202ENST00000341316 PDLIM2Q96JY6 352 aa24■■□□□ 1.43
SPG7-202ENST00000341316 MTMR6Q9Y217 621 aa24■■□□□ 1.43
SPG7-202ENST00000341316 EYA2O00167 538 aa24■■□□□ 1.43
SPG7-202ENST00000341316 KBTBD3Q8NAB2 608 aa24■■□□□ 1.43
SPG7-202ENST00000341316 TMEM87AQ8NBN3 555 aa24■■□□□ 1.43
SPG7-202ENST00000341316 TCIRG1Q13488 830 aa23.99■■□□□ 1.43
SPG7-202ENST00000341316 HMG20BQ9P0W2 317 aa23.99■■□□□ 1.43
SPG7-202ENST00000341316 MCMDC2Q4G0Z9 681 aa23.99■■□□□ 1.43
SPG7-202ENST00000341316 GPR108Q9NPR9 543 aa23.99■■□□□ 1.43
SPG7-202ENST00000341316 ATG3Q9NT62 314 aa23.99■■□□□ 1.43
SPG7-202ENST00000341316 GOLIM4O00461 696 aa23.98■■□□□ 1.43
SPG7-202ENST00000341316 TCHHQ07283 1943 aa23.98■■□□□ 1.43
SPG7-202ENST00000341316 HSP90AA2PQ14568 343 aaPredicted RBP23.98■■□□□ 1.43
SPG7-202ENST00000341316 HS1BP3Q53T59 392 aa23.98■■□□□ 1.43
SPG7-202ENST00000341316 ALDH8A1Q9H2A2 487 aaPredicted RBP23.97■■□□□ 1.43
SPG7-202ENST00000341316 TPM2P07951 284 aa23.96■■□□□ 1.43
SPG7-202ENST00000341316 PAG1Q9NWQ8 432 aa23.96■■□□□ 1.43
SPG7-202ENST00000341316 RRP9O43818 475 aaKnown RBP23.96■■□□□ 1.43
SPG7-202ENST00000341316 A0A1B0GUL7 405 aa23.95■■□□□ 1.43
SPG7-202ENST00000341316 OFD1O75665 1012 aa23.95■■□□□ 1.43
SPG7-202ENST00000341316 CIAO1O76071 339 aa23.95■■□□□ 1.43
SPG7-202ENST00000341316 FAM89AQ96GI7 184 aa23.95■■□□□ 1.43
SPG7-202ENST00000341316 PALLDQ8WX93 1383 aa23.95■■□□□ 1.42
SPG7-202ENST00000341316 CYP21A2P08686 494 aa23.95■■□□□ 1.42
SPG7-202ENST00000341316 CCDC85AQ96PX6 553 aaPredicted RBP23.95■■□□□ 1.42
SPG7-202ENST00000341316 ANKRD1Q15327 319 aa23.94■■□□□ 1.42
SPG7-202ENST00000341316 VSIG10Q8N0Z9 540 aa23.94■■□□□ 1.42
SPG7-202ENST00000341316 NOL7Q9UMY1 257 aaKnown RBP23.94■■□□□ 1.42
SPG7-202ENST00000341316 SH3TC1Q8TE82 1336 aa23.94■■□□□ 1.42
SPG7-202ENST00000341316 DNM1Q05193 864 aaKnown RBP23.94■■□□□ 1.42
SPG7-202ENST00000341316 TRIM28Q13263 835 aaKnown RBP23.94■■□□□ 1.42
SPG7-202ENST00000341316 TPRNQ4KMQ1 711 aa23.94■■□□□ 1.42
SPG7-202ENST00000341316 U3KPZ7 1027 aaPredicted RBP23.94■■□□□ 1.42
SPG7-202ENST00000341316 VPS37CA5D8V6 355 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms