RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 TPTE2Q6XPS3 522 aa25.66■■□□□ 1.7
CLDND1-201ENST00000341181 HMMRO75330 724 aa25.66■■□□□ 1.7
CLDND1-201ENST00000341181 TTLL11Q8NHH1 800 aa25.66■■□□□ 1.7
CLDND1-201ENST00000341181 EXOC6BQ9Y2D4 811 aa25.66■■□□□ 1.7
CLDND1-201ENST00000341181 NPHP1O15259 732 aa25.65■■□□□ 1.7
CLDND1-201ENST00000341181 GREM2Q9H772 168 aa25.65■■□□□ 1.7
CLDND1-201ENST00000341181 PSDA5PKW4 1024 aaPredicted RBP25.64■■□□□ 1.7
CLDND1-201ENST00000341181 CSF1RP07333 972 aa25.64■■□□□ 1.7
CLDND1-201ENST00000341181 RFX5P48382 616 aaPredicted RBP25.64■■□□□ 1.7
CLDND1-201ENST00000341181 SMC5Q8IY18 1101 aa25.64■■□□□ 1.7
CLDND1-201ENST00000341181 NRXN2Q9P2S2 1712 aa25.64■■□□□ 1.69
CLDND1-201ENST00000341181 COL4A1P02462 1669 aa25.64■■□□□ 1.69
CLDND1-201ENST00000341181 DCTPP1Q9H773 170 aa25.63■■□□□ 1.69
CLDND1-201ENST00000341181 APBB1O00213 710 aa25.62■■□□□ 1.69
CLDND1-201ENST00000341181 ZBTB7AO95365 584 aa25.61■■□□□ 1.69
CLDND1-201ENST00000341181 PTPN12Q05209 780 aaKnown RBP25.61■■□□□ 1.69
CLDND1-201ENST00000341181 SLC10A5Q5PT55 438 aa25.61■■□□□ 1.69
CLDND1-201ENST00000341181 ZNF594Q96JF6 807 aaPredicted RBP25.61■■□□□ 1.69
CLDND1-201ENST00000341181 SIL1Q9H173 461 aa25.61■■□□□ 1.69
CLDND1-201ENST00000341181 SURF6O75683 361 aaKnown RBP25.59■■□□□ 1.69
CLDND1-201ENST00000341181 ITGA6P23229 1130 aa25.59■■□□□ 1.69
CLDND1-201ENST00000341181 GCC1Q96CN9 775 aa25.59■■□□□ 1.69
CLDND1-201ENST00000341181 SEC31BQ9NQW1 1179 aa25.59■■□□□ 1.69
CLDND1-201ENST00000341181 PARP3Q9Y6F1 533 aa25.59■■□□□ 1.69
CLDND1-201ENST00000341181 ANKRD31Q8N7Z5 1873 aa25.58■■□□□ 1.69
CLDND1-201ENST00000341181 ST5P78524 1137 aa25.57■■□□□ 1.68
CLDND1-201ENST00000341181 CCDC57Q2TAC2 916 aa25.57■■□□□ 1.68
CLDND1-201ENST00000341181 SLC16A10Q8TF71 515 aa25.57■■□□□ 1.68
CLDND1-201ENST00000341181 BCL11AQ9H165 835 aa25.57■■□□□ 1.68
CLDND1-201ENST00000341181 TAF1P21675 1872 aa25.57■■□□□ 1.68
CLDND1-201ENST00000341181 UTRNP46939 3433 aa25.56■■□□□ 1.68
CLDND1-201ENST00000341181 IFIT5Q13325 482 aaKnown RBP25.56■■□□□ 1.68
CLDND1-201ENST00000341181 COPRSQ9NQ92 184 aa25.56■■□□□ 1.68
CLDND1-201ENST00000341181 HSP90B1P14625 803 aaKnown RBP25.56■■□□□ 1.68
CLDND1-201ENST00000341181 CCDC152Q4G0S7 254 aa25.56■■□□□ 1.68
CLDND1-201ENST00000341181 NLRP3Q96P20 1036 aa25.56■■□□□ 1.68
CLDND1-201ENST00000341181 PDZRN3Q9UPQ7 1066 aa25.56■■□□□ 1.68
CLDND1-201ENST00000341181 NOP58Q9Y2X3 529 aaKnown RBP25.56■■□□□ 1.68
CLDND1-201ENST00000341181 RIC1Q4ADV7 1423 aa25.55■■□□□ 1.68
CLDND1-201ENST00000341181 SMARCA5O60264 1052 aaPredicted RBP25.55■■□□□ 1.68
CLDND1-201ENST00000341181 SF3B3Q15393 1217 aaKnown RBP25.55■■□□□ 1.68
CLDND1-201ENST00000341181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.55■■□□□ 1.68
CLDND1-201ENST00000341181 ANKRD45Q5TZF3 282 aa25.55■■□□□ 1.68
CLDND1-201ENST00000341181 LRP5O75197 1615 aa25.55■■□□□ 1.68
CLDND1-201ENST00000341181 PUS3Q9BZE2 481 aaKnown RBP25.54■■□□□ 1.68
CLDND1-201ENST00000341181 ATF5Q9Y2D1 282 aaPredicted RBP25.54■■□□□ 1.68
CLDND1-201ENST00000341181 RTL9Q8NET4 1388 aa25.54■■□□□ 1.68
CLDND1-201ENST00000341181 NUCB1Q02818 461 aa25.54■■□□□ 1.68
CLDND1-201ENST00000341181 LRRC24Q50LG9 513 aa25.54■■□□□ 1.68
CLDND1-201ENST00000341181 LNPKQ9C0E8 428 aa25.54■■□□□ 1.68
CLDND1-201ENST00000341181 RBM19Q9Y4C8 960 aaKnown RBP25.54■■□□□ 1.68
CLDND1-201ENST00000341181 ANKRD18BA2A2Z9 1011 aa25.52■■□□□ 1.68
CLDND1-201ENST00000341181 SPEF2Q9C093 1822 aa25.52■■□□□ 1.68
CLDND1-201ENST00000341181 OS9Q13438 667 aaPredicted RBP25.52■■□□□ 1.68
CLDND1-201ENST00000341181 SASH1O94885 1247 aa25.51■■□□□ 1.67
CLDND1-201ENST00000341181 COL11A2P13942 1736 aaPredicted RBP25.51■■□□□ 1.67
CLDND1-201ENST00000341181 ATG9AQ7Z3C6 839 aa25.51■■□□□ 1.67
CLDND1-201ENST00000341181 MTFR1LQ9H019 292 aa25.51■■□□□ 1.67
CLDND1-201ENST00000341181 CRY2Q49AN0 593 aa25.51■■□□□ 1.67
CLDND1-201ENST00000341181 TAF7LQ5H9L4 462 aa25.51■■□□□ 1.67
CLDND1-201ENST00000341181 CHD1LQ86WJ1 897 aa25.51■■□□□ 1.67
CLDND1-201ENST00000341181 IL1RAPL2Q9NP60 686 aa25.51■■□□□ 1.67
CLDND1-201ENST00000341181 SLC51AQ86UW1 340 aa25.49■■□□□ 1.67
CLDND1-201ENST00000341181 RHPN1Q8TCX5 695 aa25.49■■□□□ 1.67
CLDND1-201ENST00000341181 CELF1Q92879 486 aaKnown RBP25.49■■□□□ 1.67
CLDND1-201ENST00000341181 PDE4AP27815 886 aa25.49■■□□□ 1.67
CLDND1-201ENST00000341181 G3BP1Q13283 466 aaKnown RBP eCLIP25.49■■□□□ 1.67
CLDND1-201ENST00000341181 BRIP1Q9BX63 1249 aa25.49■■□□□ 1.67
CLDND1-201ENST00000341181 LRRCC1Q9C099 1032 aa25.49■■□□□ 1.67
CLDND1-201ENST00000341181 EYA2O00167 538 aa25.48■■□□□ 1.67
CLDND1-201ENST00000341181 KLRG2A4D1S0 409 aaPredicted RBP25.47■■□□□ 1.67
CLDND1-201ENST00000341181 LDHAL6AQ6ZMR3 332 aa25.47■■□□□ 1.67
CLDND1-201ENST00000341181 C16orf71Q8IYS4 520 aaPredicted RBP25.47■■□□□ 1.67
CLDND1-201ENST00000341181 OTUD7AQ8TE49 926 aaPredicted RBP25.47■■□□□ 1.67
CLDND1-201ENST00000341181 RAB11FIP3O75154 756 aa25.46■■□□□ 1.67
CLDND1-201ENST00000341181 HSP90AB4PQ58FF6 505 aa25.46■■□□□ 1.67
CLDND1-201ENST00000341181 KIF1BPQ96EK5 621 aa25.46■■□□□ 1.67
CLDND1-201ENST00000341181 C10orf71Q711Q0 1435 aa25.46■■□□□ 1.67
CLDND1-201ENST00000341181 RGS3P49796 1198 aa25.46■■□□□ 1.67
CLDND1-201ENST00000341181 TFCP2Q12800 502 aa25.45■■□□□ 1.67
CLDND1-201ENST00000341181 SGIP1Q9BQI5 828 aa25.45■■□□□ 1.67
CLDND1-201ENST00000341181 DDX46Q7L014 1031 aaKnown RBP25.45■■□□□ 1.66
CLDND1-201ENST00000341181 RIPOR2Q9Y4F9 1068 aa25.45■■□□□ 1.66
CLDND1-201ENST00000341181 CIAO1O76071 339 aa25.44■■□□□ 1.66
CLDND1-201ENST00000341181 RPGRQ92834 1020 aaKnown RBP25.44■■□□□ 1.66
CLDND1-201ENST00000341181 CDC5LQ99459 802 aaKnown RBP25.44■■□□□ 1.66
CLDND1-201ENST00000341181 CNNM1Q9NRU3 951 aa25.44■■□□□ 1.66
CLDND1-201ENST00000341181 SRGNP10124 158 aa25.43■■□□□ 1.66
CLDND1-201ENST00000341181 IL15P40933 162 aaPredicted RBP25.43■■□□□ 1.66
CLDND1-201ENST00000341181 ERC1Q8IUD2 1116 aa25.43■■□□□ 1.66
CLDND1-201ENST00000341181 ANKRD18AQ8IVF6 992 aa25.43■■□□□ 1.66
CLDND1-201ENST00000341181 MPHOSPH8Q99549 860 aa25.43■■□□□ 1.66
CLDND1-201ENST00000341181 IGHMBP2P38935 993 aaKnown RBP25.42■■□□□ 1.66
CLDND1-201ENST00000341181 PTGER2P43116 358 aa25.42■■□□□ 1.66
CLDND1-201ENST00000341181 CHRNA5P30532 468 aa25.41■■□□□ 1.66
CLDND1-201ENST00000341181 PDE6BP35913 854 aa25.41■■□□□ 1.66
CLDND1-201ENST00000341181 POLD1P28340 1107 aa25.41■■□□□ 1.66
CLDND1-201ENST00000341181 RPS8P62241 208 aaKnown RBP25.41■■□□□ 1.66
CLDND1-201ENST00000341181 GRAPQ13588 217 aa25.41■■□□□ 1.66
CLDND1-201ENST00000341181 GRAPLQ8TC17 118 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms