RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 ANKRD18BA2A2Z9 1011 aa8.8□□□□□ -1
NUP43-201ENST00000340413 KLRG2A4D1S0 409 aaPredicted RBP8.8□□□□□ -1
NUP43-201ENST00000340413 HLFQ16534 295 aa8.8□□□□□ -1
NUP43-201ENST00000340413 TXNRD1Q16881 649 aa8.8□□□□□ -1
NUP43-201ENST00000340413 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
NUP43-201ENST00000340413 IRS4O14654 1257 aaPredicted RBP8.8□□□□□ -1
NUP43-201ENST00000340413 LTBP1Q14766 1721 aa8.8□□□□□ -1
NUP43-201ENST00000340413 TNRC6CQ9HCJ0 1690 aaKnown RBP8.8□□□□□ -1
NUP43-201ENST00000340413 TTLL11Q8NHH1 800 aa8.8□□□□□ -1
NUP43-201ENST00000340413 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
NUP43-201ENST00000340413 CCDC57Q2TAC2 916 aa8.8□□□□□ -1
NUP43-201ENST00000340413 ECHDC1Q9NTX5 307 aa8.8□□□□□ -1
NUP43-201ENST00000340413 ATP5JP18859 108 aa8.79□□□□□ -1
NUP43-201ENST00000340413 TM4SF1P30408 202 aa8.79□□□□□ -1
NUP43-201ENST00000340413 IFIT5Q13325 482 aaKnown RBP8.79□□□□□ -1
NUP43-201ENST00000340413 LRRFIP1Q32MZ4 808 aaKnown RBP8.79□□□□□ -1
NUP43-201ENST00000340413 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
NUP43-201ENST00000340413 LMBR1LQ6UX01 489 aa8.79□□□□□ -1
NUP43-201ENST00000340413 TRMT112Q9UI30 125 aaKnown RBP8.79□□□□□ -1
NUP43-201ENST00000340413 MYH7P12883 1935 aa8.79□□□□□ -1
NUP43-201ENST00000340413 GNPATO15228 680 aa8.79□□□□□ -1
NUP43-201ENST00000340413 TPTE2Q6XPS3 522 aa8.79□□□□□ -1
NUP43-201ENST00000340413 LNPKQ9C0E8 428 aa8.79□□□□□ -1
NUP43-201ENST00000340413 UPF2Q9HAU5 1272 aaKnown RBP8.79□□□□□ -1
NUP43-201ENST00000340413 SUSD4Q5VX71 490 aa8.79□□□□□ -1
NUP43-201ENST00000340413 C15orf52Q6ZUT6 534 aaKnown RBP8.79□□□□□ -1
NUP43-201ENST00000340413 ATG9AQ7Z3C6 839 aa8.79□□□□□ -1
NUP43-201ENST00000340413 NLGN1Q8N2Q7 840 aa8.79□□□□□ -1
NUP43-201ENST00000340413 SLC16A10Q8TF71 515 aa8.79□□□□□ -1
NUP43-201ENST00000340413 ANKRD31Q8N7Z5 1873 aa8.78□□□□□ -1
NUP43-201ENST00000340413 ATP5J2-PTCD1G3V325 749 aa8.78□□□□□ -1
NUP43-201ENST00000340413 SASH1O94885 1247 aa8.78□□□□□ -1
NUP43-201ENST00000340413 RFC4P35249 363 aa8.78□□□□□ -1
NUP43-201ENST00000340413 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
NUP43-201ENST00000340413 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
NUP43-201ENST00000340413 SETDB2Q96T68 719 aa8.78□□□□□ -1
NUP43-201ENST00000340413 NIP7Q9Y221 180 aaKnown RBP eCLIP8.78□□□□□ -1
NUP43-201ENST00000340413 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
NUP43-201ENST00000340413 TNNI3KQ59H18 835 aa8.78□□□□□ -1
NUP43-201ENST00000340413 POTEAQ6S8J7 498 aa8.78□□□□□ -1
NUP43-201ENST00000340413 PI4K2BQ8TCG2 481 aa8.78□□□□□ -1
NUP43-201ENST00000340413 CAMKK2Q96RR4 588 aa8.78□□□□□ -1
NUP43-201ENST00000340413 FPGT-TNNI3KV9GXZ4 949 aa8.78□□□□□ -1
NUP43-201ENST00000340413 CNTROBQ8N137 903 aa8.78□□□□□ -1
NUP43-201ENST00000340413 EVI5LQ96CN4 794 aa8.78□□□□□ -1
NUP43-201ENST00000340413 RIPOR2Q9Y4F9 1068 aa8.78□□□□□ -1
NUP43-201ENST00000340413 IFIT2P09913 472 aaKnown RBP8.77□□□□□ -1.01
NUP43-201ENST00000340413 LRRC4BQ9NT99 713 aa8.77□□□□□ -1.01
NUP43-201ENST00000340413 EXOC6BQ9Y2D4 811 aa8.77□□□□□ -1.01
NUP43-201ENST00000340413 HOXA10P31260 410 aaPredicted RBP8.77□□□□□ -1.01
NUP43-201ENST00000340413 RBM25P49756 843 aaKnown RBP8.77□□□□□ -1.01
NUP43-201ENST00000340413 OS9Q13438 667 aaPredicted RBP8.77□□□□□ -1.01
NUP43-201ENST00000340413 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
NUP43-201ENST00000340413 SEMA3EO15041 775 aa8.77□□□□□ -1.01
NUP43-201ENST00000340413 TRIM37O94972 964 aa8.77□□□□□ -1.01
NUP43-201ENST00000340413 CRY2Q49AN0 593 aa8.77□□□□□ -1.01
NUP43-201ENST00000340413 VGLL2Q8N8G2 317 aa8.77□□□□□ -1.01
NUP43-201ENST00000340413 ANKRD2Q9GZV1 360 aa8.77□□□□□ -1.01
NUP43-201ENST00000340413 UQCRFS1P1P0C7P4 283 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 BAG6P46379 1132 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 BSDC1Q9NW68 430 aaPredicted RBP8.76□□□□□ -1.01
NUP43-201ENST00000340413 GSPT1P15170 499 aaKnown RBP8.76□□□□□ -1.01
NUP43-201ENST00000340413 RUFY2Q8WXA3 655 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 REC8O95072 547 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 GYS1P13807 737 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 FGFR2P21802 821 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 RGS3P49796 1198 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 ST5P78524 1137 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 USPL1Q5W0Q7 1092 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 CRAMP1Q96RY5 1269 aa8.76□□□□□ -1.01
NUP43-201ENST00000340413 APBA3O96018 575 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 IGHMBP2P38935 993 aaKnown RBP8.75□□□□□ -1.01
NUP43-201ENST00000340413 PIP4K2AP48426 406 aaPredicted RBP8.75□□□□□ -1.01
NUP43-201ENST00000340413 PROM2Q8N271 834 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 HAUS7Q99871 368 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 ITGA6P23229 1130 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 NT5C2P49902 561 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 ANAPC15P60006 121 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 UBE4AQ14139 1066 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 TBC1D9BQ66K14 1250 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 PUM3Q15397 648 aaKnown RBP8.75□□□□□ -1.01
NUP43-201ENST00000340413 LPIN2Q92539 896 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 NLRP3Q96P20 1036 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 AKAP11Q9UKA4 1901 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 MYH13Q9UKX3 1938 aa8.75□□□□□ -1.01
NUP43-201ENST00000340413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
NUP43-201ENST00000340413 ZFYP08048 801 aaPredicted RBP8.74□□□□□ -1.01
NUP43-201ENST00000340413 ARID4AP29374 1257 aaPredicted RBP8.74□□□□□ -1.01
NUP43-201ENST00000340413 FAM89AQ96GI7 184 aa8.74□□□□□ -1.01
NUP43-201ENST00000340413 TBC1D32Q96NH3 1257 aa8.74□□□□□ -1.01
NUP43-201ENST00000340413 STK32BQ9NY57 414 aa8.74□□□□□ -1.01
NUP43-201ENST00000340413 LAMA4Q16363 1823 aa8.74□□□□□ -1.01
NUP43-201ENST00000340413 COL11A2P13942 1736 aaPredicted RBP8.74□□□□□ -1.01
NUP43-201ENST00000340413 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
NUP43-201ENST00000340413 PTF1AQ7RTS3 328 aa8.74□□□□□ -1.01
NUP43-201ENST00000340413 RPAP1Q9BWH6 1393 aaPredicted RBP8.74□□□□□ -1.01
NUP43-201ENST00000340413 SDSP20132 328 aa8.74□□□□□ -1.01
NUP43-201ENST00000340413 SF3B2Q13435 895 aaKnown RBP8.74□□□□□ -1.01
NUP43-201ENST00000340413 AACSQ86V21 672 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms