RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 EXOC6BQ9Y2D4 811 aa18.66■□□□□ 0.58
TUBB4B-201ENST00000340384 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
TUBB4B-201ENST00000340384 SMARCA5O60264 1052 aaPredicted RBP18.65■□□□□ 0.58
TUBB4B-201ENST00000340384 PCCAP05165 728 aaPredicted RBP18.65■□□□□ 0.58
TUBB4B-201ENST00000340384 TBC1D9Q6ZT07 1266 aa18.65■□□□□ 0.58
TUBB4B-201ENST00000340384 UBE3BQ7Z3V4 1068 aa18.65■□□□□ 0.58
TUBB4B-201ENST00000340384 NUTM1Q86Y26 1132 aa18.65■□□□□ 0.58
TUBB4B-201ENST00000340384 UTP14AQ9BVJ6 771 aaKnown RBP18.65■□□□□ 0.58
TUBB4B-201ENST00000340384 TRMT112Q9UI30 125 aaKnown RBP18.65■□□□□ 0.58
TUBB4B-201ENST00000340384 SERPINB2P05120 415 aa18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 GSPT1P15170 499 aaKnown RBP18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 RBM25P49756 843 aaKnown RBP18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 MTX1Q13505 466 aa18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 EPHA10Q5JZY3 1008 aa18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 PPP1R42Q7Z4L9 355 aa18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 CCDC24Q8N4L8 307 aa18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 SUCLG2Q96I99 432 aa18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 AOX1Q06278 1338 aa18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 CARMIL3Q8ND23 1372 aa18.64■□□□□ 0.57
TUBB4B-201ENST00000340384 SRGAP3O43295 1099 aa18.63■□□□□ 0.57
TUBB4B-201ENST00000340384 ERFEQ4G0M1 354 aa18.63■□□□□ 0.57
TUBB4B-201ENST00000340384 C16orf71Q8IYS4 520 aaPredicted RBP18.63■□□□□ 0.57
TUBB4B-201ENST00000340384 SGIP1Q9BQI5 828 aa18.63■□□□□ 0.57
TUBB4B-201ENST00000340384 ATF5Q9Y2D1 282 aaPredicted RBP18.63■□□□□ 0.57
TUBB4B-201ENST00000340384 PDE1AP54750 535 aa18.63■□□□□ 0.57
TUBB4B-201ENST00000340384 PRR5LQ6MZQ0 368 aa18.63■□□□□ 0.57
TUBB4B-201ENST00000340384 NBPF5PQ86XG9 351 aaPredicted RBP18.62■□□□□ 0.57
TUBB4B-201ENST00000340384 MTFR1LQ9H019 292 aa18.62■□□□□ 0.57
TUBB4B-201ENST00000340384 ABCC12Q96J65 1359 aa18.62■□□□□ 0.57
TUBB4B-201ENST00000340384 SURF6O75683 361 aaKnown RBP18.61■□□□□ 0.57
TUBB4B-201ENST00000340384 HCLS1P14317 486 aaPredicted RBP18.61■□□□□ 0.57
TUBB4B-201ENST00000340384 FOXO4P98177 505 aa18.61■□□□□ 0.57
TUBB4B-201ENST00000340384 C3orf67Q6ZVT6 689 aa18.61■□□□□ 0.57
TUBB4B-201ENST00000340384 KIF1BPQ96EK5 621 aa18.61■□□□□ 0.57
TUBB4B-201ENST00000340384 SH3TC1Q8TE82 1336 aa18.61■□□□□ 0.57
TUBB4B-201ENST00000340384 CDHR2Q9BYE9 1310 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 MX1P20591 662 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 PTGER2P43116 358 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 SLC10A5Q5PT55 438 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 TPTE2Q6XPS3 522 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 ERC1Q8IUD2 1116 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 NRXN2Q9P2S2 1712 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 IRS4O14654 1257 aaPredicted RBP18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 OTUD7AQ8TE49 926 aaPredicted RBP18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 BCL11AQ9H165 835 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 STAP2Q9UGK3 403 aa18.6■□□□□ 0.57
TUBB4B-201ENST00000340384 SALL3Q9BXA9 1300 aa18.59■□□□□ 0.57
TUBB4B-201ENST00000340384 SDSP20132 328 aa18.59■□□□□ 0.57
TUBB4B-201ENST00000340384 SLC4A3P48751 1232 aa18.59■□□□□ 0.57
TUBB4B-201ENST00000340384 PLA2G12BQ9BX93 195 aa18.59■□□□□ 0.57
TUBB4B-201ENST00000340384 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
TUBB4B-201ENST00000340384 BICC1Q9H694 974 aaKnown RBP18.59■□□□□ 0.57
TUBB4B-201ENST00000340384 CNBD1Q8NA66 436 aa18.58■□□□□ 0.56
TUBB4B-201ENST00000340384 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.56
TUBB4B-201ENST00000340384 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
TUBB4B-201ENST00000340384 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
TUBB4B-201ENST00000340384 REC8O95072 547 aa18.56■□□□□ 0.56
TUBB4B-201ENST00000340384 CSF1RP07333 972 aa18.56■□□□□ 0.56
TUBB4B-201ENST00000340384 OS9Q13438 667 aaPredicted RBP18.56■□□□□ 0.56
TUBB4B-201ENST00000340384 RABL6Q3YEC7 729 aaPredicted RBP18.56■□□□□ 0.56
TUBB4B-201ENST00000340384 HSCBQ8IWL3 235 aa18.56■□□□□ 0.56
TUBB4B-201ENST00000340384 SRCAPQ6ZRS2 3230 aa18.56■□□□□ 0.56
TUBB4B-201ENST00000340384 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
TUBB4B-201ENST00000340384 TNRC6CQ9HCJ0 1690 aaKnown RBP18.55■□□□□ 0.56
TUBB4B-201ENST00000340384 PDE8AO60658 829 aa18.55■□□□□ 0.56
TUBB4B-201ENST00000340384 TBC1D2Q9BYX2 928 aa18.55■□□□□ 0.56
TUBB4B-201ENST00000340384 KLRG2A4D1S0 409 aaPredicted RBP18.54■□□□□ 0.56
TUBB4B-201ENST00000340384 GTF2E1P29083 439 aaPredicted RBP18.54■□□□□ 0.56
TUBB4B-201ENST00000340384 LMBR1LQ6UX01 489 aa18.54■□□□□ 0.56
TUBB4B-201ENST00000340384 SNX21Q969T3 373 aa18.54■□□□□ 0.56
TUBB4B-201ENST00000340384 AK9Q5TCS8 1911 aa18.54■□□□□ 0.56
TUBB4B-201ENST00000340384 CTSWP56202 376 aa18.53■□□□□ 0.56
TUBB4B-201ENST00000340384 NBR1Q14596 966 aa18.53■□□□□ 0.56
TUBB4B-201ENST00000340384 GPATCH3Q96I76 525 aa18.53■□□□□ 0.56
TUBB4B-201ENST00000340384 CCDC85AQ96PX6 553 aaPredicted RBP18.53■□□□□ 0.56
TUBB4B-201ENST00000340384 COL4A1P02462 1669 aa18.53■□□□□ 0.56
TUBB4B-201ENST00000340384 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
TUBB4B-201ENST00000340384 ERC2O15083 957 aa18.52■□□□□ 0.56
TUBB4B-201ENST00000340384 SF3B3Q15393 1217 aaKnown RBP18.52■□□□□ 0.56
TUBB4B-201ENST00000340384 CLASRPQ8N2M8 674 aaKnown RBP18.52■□□□□ 0.56
TUBB4B-201ENST00000340384 BRIP1Q9BX63 1249 aa18.52■□□□□ 0.56
TUBB4B-201ENST00000340384 ANKRD31Q8N7Z5 1873 aa18.52■□□□□ 0.56
TUBB4B-201ENST00000340384 TTC41PQ6P2S7 1318 aa18.52■□□□□ 0.56
TUBB4B-201ENST00000340384 RFX5P48382 616 aaPredicted RBP18.52■□□□□ 0.55
TUBB4B-201ENST00000340384 GREM2Q9H772 168 aa18.52■□□□□ 0.55
TUBB4B-201ENST00000340384 ST5P78524 1137 aa18.51■□□□□ 0.55
TUBB4B-201ENST00000340384 G3BP1Q13283 466 aaKnown RBP eCLIP18.51■□□□□ 0.553e-8■■■□□ 18.8
TUBB4B-201ENST00000340384 CRY2Q49AN0 593 aa18.51■□□□□ 0.55
TUBB4B-201ENST00000340384 IL1RAPL2Q9NP60 686 aa18.51■□□□□ 0.55
TUBB4B-201ENST00000340384 LAMB2P55268 1798 aa18.51■□□□□ 0.55
TUBB4B-201ENST00000340384 C10orf71Q711Q0 1435 aa18.51■□□□□ 0.55
TUBB4B-201ENST00000340384 TRIM6-TRIM34B2RNG4 842 aa18.5■□□□□ 0.55
TUBB4B-201ENST00000340384 NLRP3Q96P20 1036 aa18.5■□□□□ 0.55
TUBB4B-201ENST00000340384 SEC31BQ9NQW1 1179 aa18.5■□□□□ 0.55
TUBB4B-201ENST00000340384 NPHP1O15259 732 aa18.49■□□□□ 0.55
TUBB4B-201ENST00000340384 POLD1P28340 1107 aa18.49■□□□□ 0.55
TUBB4B-201ENST00000340384 SPON1Q9HCB6 807 aa18.49■□□□□ 0.55
TUBB4B-201ENST00000340384 RABEP1Q15276 862 aa18.49■□□□□ 0.55
TUBB4B-201ENST00000340384 KLHDC4Q8TBB5 520 aa18.49■□□□□ 0.55
TUBB4B-201ENST00000340384 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms